SOLTUB.AGRIA.G00000008706


Description : Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain-containing protein


Gene families : OG_02_0013244 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000008706
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_157


Type GO Term Name Evidence Source
MF GO:0003724 RNA helicase activity IEA AHRD
MF GO:0003729 mRNA binding IEA AHRD
MF GO:0005515 protein binding IEA AHRD
CC GO:0005634 nucleus IEA AHRD
CC GO:0005829 cytosol IEA AHRD
BP GO:0006810 transport IEA AHRD
BP GO:0007264 small GTPase mediated signal transduction IEA AHRD
BP GO:0009737 response to abscisic acid IEA AHRD
CC GO:0010494 cytoplasmic stress granule IEA AHRD
BP GO:0032481 positive regulation of type I interferon production IEA AHRD
CC GO:0032991 protein-containing complex IEA AHRD
MF GO:0033677 DNA/RNA helicase activity IEA AHRD
BP GO:0051607 defense response to virus IEA AHRD
BP GO:0062029 positive regulation of stress granule assembly IEA AHRD
BP GO:0090090 negative regulation of canonical Wnt signaling pathway IEA AHRD
Type GO Term Name Evidence Source
CC GO:0000307 cyclin-dependent protein kinase holoenzyme complex IEP Predict GO terms from Neighborhoods
BP GO:0000380 alternative mRNA splicing, via spliceosome IEP Predict GO terms from Neighborhoods
BP GO:0001525 angiogenesis IEP Predict GO terms from Neighborhoods
BP GO:0001932 regulation of protein phosphorylation IEP Predict GO terms from Neighborhoods
BP GO:0001933 negative regulation of protein phosphorylation IEP Predict GO terms from Neighborhoods
BP GO:0002791 regulation of peptide secretion IEP Predict GO terms from Neighborhoods
BP GO:0002793 positive regulation of peptide secretion IEP Predict GO terms from Neighborhoods
CC GO:0002944 cyclin K-CDK12 complex IEP Predict GO terms from Neighborhoods
CC GO:0002945 cyclin K-CDK13 complex IEP Predict GO terms from Neighborhoods
MF GO:0004693 cyclin-dependent protein serine/threonine kinase activity IEP Predict GO terms from Neighborhoods
CC GO:0005778 peroxisomal membrane IEP Predict GO terms from Neighborhoods
CC GO:0005798 Golgi-associated vesicle IEP Predict GO terms from Neighborhoods
CC GO:0005814 centriole IEP Predict GO terms from Neighborhoods
CC GO:0005929 cilium IEP Predict GO terms from Neighborhoods
BP GO:0006612 protein targeting to membrane IEP Predict GO terms from Neighborhoods
BP GO:0006625 protein targeting to peroxisome IEP Predict GO terms from Neighborhoods
BP GO:0006903 vesicle targeting IEP Predict GO terms from Neighborhoods
BP GO:0006904 vesicle docking involved in exocytosis IEP Predict GO terms from Neighborhoods
BP GO:0006906 vesicle fusion IEP Predict GO terms from Neighborhoods
BP GO:0007031 peroxisome organization IEP Predict GO terms from Neighborhoods
BP GO:0007155 cell adhesion IEP Predict GO terms from Neighborhoods
BP GO:0007409 axonogenesis IEP Predict GO terms from Neighborhoods
CC GO:0008021 synaptic vesicle IEP Predict GO terms from Neighborhoods
CC GO:0008023 transcription elongation factor complex IEP Predict GO terms from Neighborhoods
CC GO:0008024 cyclin/CDK positive transcription elongation factor complex IEP Predict GO terms from Neighborhoods
MF GO:0008353 RNA polymerase II CTD heptapeptide repeat kinase activity IEP Predict GO terms from Neighborhoods
MF GO:0008381 mechanosensitive ion channel activity IEP Predict GO terms from Neighborhoods
BP GO:0009581 detection of external stimulus IEP Predict GO terms from Neighborhoods
BP GO:0009582 detection of abiotic stimulus IEP Predict GO terms from Neighborhoods
BP GO:0009612 response to mechanical stimulus IEP Predict GO terms from Neighborhoods
BP GO:0009755 hormone-mediated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0010632 regulation of epithelial cell migration IEP Predict GO terms from Neighborhoods
BP GO:0010633 negative regulation of epithelial cell migration IEP Predict GO terms from Neighborhoods
BP GO:0010647 positive regulation of cell communication IEP Predict GO terms from Neighborhoods
BP GO:0010827 regulation of glucose transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0010828 positive regulation of glucose transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0010906 regulation of glucose metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0015919 peroxisomal membrane transport IEP Predict GO terms from Neighborhoods
BP GO:0016339 calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules IEP Predict GO terms from Neighborhoods
MF GO:0016413 O-acetyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0016500 protein-hormone receptor activity IEP Predict GO terms from Neighborhoods
CC GO:0016604 nuclear body IEP Predict GO terms from Neighborhoods
MF GO:0017022 myosin binding IEP Predict GO terms from Neighborhoods
BP GO:0017157 regulation of exocytosis IEP Predict GO terms from Neighborhoods
CC GO:0018995 host cellular component IEP Predict GO terms from Neighborhoods
MF GO:0019003 GDP binding IEP Predict GO terms from Neighborhoods
BP GO:0019220 regulation of phosphate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0019221 cytokine-mediated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0019395 fatty acid oxidation IEP Predict GO terms from Neighborhoods
BP GO:0019882 antigen processing and presentation IEP Predict GO terms from Neighborhoods
MF GO:0019900 kinase binding IEP Predict GO terms from Neighborhoods
MF GO:0019901 protein kinase binding IEP Predict GO terms from Neighborhoods
CC GO:0019908 nuclear cyclin-dependent protein kinase holoenzyme complex IEP Predict GO terms from Neighborhoods
BP GO:0022406 membrane docking IEP Predict GO terms from Neighborhoods
MF GO:0022836 gated channel activity IEP Predict GO terms from Neighborhoods
BP GO:0023056 positive regulation of signaling IEP Predict GO terms from Neighborhoods
BP GO:0030031 cell projection assembly IEP Predict GO terms from Neighborhoods
BP GO:0030097 hemopoiesis IEP Predict GO terms from Neighborhoods
CC GO:0030135 coated vesicle IEP Predict GO terms from Neighborhoods
CC GO:0030136 clathrin-coated vesicle IEP Predict GO terms from Neighborhoods
CC GO:0030140 trans-Golgi network transport vesicle IEP Predict GO terms from Neighborhoods
BP GO:0030243 cellulose metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0030244 cellulose biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0030332 cyclin binding IEP Predict GO terms from Neighborhoods
BP GO:0030336 negative regulation of cell migration IEP Predict GO terms from Neighborhoods
CC GO:0030496 midbody IEP Predict GO terms from Neighborhoods
CC GO:0030666 endocytic vesicle membrane IEP Predict GO terms from Neighborhoods
CC GO:0030670 phagocytic vesicle membrane IEP Predict GO terms from Neighborhoods
BP GO:0030718 germ-line stem cell population maintenance IEP Predict GO terms from Neighborhoods
MF GO:0030911 TPR domain binding IEP Predict GO terms from Neighborhoods
BP GO:0031157 regulation of aggregate size involved in sorocarp development IEP Predict GO terms from Neighborhoods
CC GO:0031164 contractile vacuolar membrane IEP Predict GO terms from Neighborhoods
MF GO:0031267 small GTPase binding IEP Predict GO terms from Neighborhoods
BP GO:0031399 regulation of protein modification process IEP Predict GO terms from Neighborhoods
MF GO:0031489 myosin V binding IEP Predict GO terms from Neighborhoods
BP GO:0031503 protein-containing complex localization IEP Predict GO terms from Neighborhoods
CC GO:0031903 microbody membrane IEP Predict GO terms from Neighborhoods
BP GO:0032024 positive regulation of insulin secretion IEP Predict GO terms from Neighborhoods
BP GO:0032104 regulation of response to extracellular stimulus IEP Predict GO terms from Neighborhoods
BP GO:0032107 regulation of response to nutrient levels IEP Predict GO terms from Neighborhoods
BP GO:0032456 endocytic recycling IEP Predict GO terms from Neighborhoods
CC GO:0032588 trans-Golgi network membrane IEP Predict GO terms from Neighborhoods
BP GO:0032784 regulation of DNA-templated transcription elongation IEP Predict GO terms from Neighborhoods
BP GO:0032786 positive regulation of DNA-templated transcription, elongation IEP Predict GO terms from Neighborhoods
MF GO:0032794 GTPase activating protein binding IEP Predict GO terms from Neighborhoods
CC GO:0032806 carboxy-terminal domain protein kinase complex IEP Predict GO terms from Neighborhoods
BP GO:0032868 response to insulin IEP Predict GO terms from Neighborhoods
BP GO:0032869 cellular response to insulin stimulus IEP Predict GO terms from Neighborhoods
BP GO:0032880 regulation of protein localization IEP Predict GO terms from Neighborhoods
BP GO:0032968 positive regulation of transcription elongation by RNA polymerase II IEP Predict GO terms from Neighborhoods
BP GO:0032989 cellular component morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0032990 cell part morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0033211 adiponectin-activated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0033298 contractile vacuole organization IEP Predict GO terms from Neighborhoods
BP GO:0033500 carbohydrate homeostasis IEP Predict GO terms from Neighborhoods
CC GO:0033643 host cell part IEP Predict GO terms from Neighborhoods
BP GO:0034243 regulation of transcription elongation by RNA polymerase II IEP Predict GO terms from Neighborhoods
BP GO:0034330 cell junction organization IEP Predict GO terms from Neighborhoods
BP GO:0034440 lipid oxidation IEP Predict GO terms from Neighborhoods
BP GO:0034728 nucleosome organization IEP Predict GO terms from Neighborhoods
BP GO:0034764 positive regulation of transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0035418 protein localization to synapse IEP Predict GO terms from Neighborhoods
CC GO:0036064 ciliary basal body IEP Predict GO terms from Neighborhoods
BP GO:0036099 female germ-line stem cell population maintenance IEP Predict GO terms from Neighborhoods
BP GO:0036473 cell death in response to oxidative stress IEP Predict GO terms from Neighborhoods
BP GO:0040013 negative regulation of locomotion IEP Predict GO terms from Neighborhoods
BP GO:0042325 regulation of phosphorylation IEP Predict GO terms from Neighborhoods
BP GO:0042326 negative regulation of phosphorylation IEP Predict GO terms from Neighborhoods
MF GO:0042562 hormone binding IEP Predict GO terms from Neighborhoods
BP GO:0042593 glucose homeostasis IEP Predict GO terms from Neighborhoods
CC GO:0043197 dendritic spine IEP Predict GO terms from Neighborhoods
BP GO:0043405 regulation of MAP kinase activity IEP Predict GO terms from Neighborhoods
BP GO:0043574 peroxisomal transport IEP Predict GO terms from Neighborhoods
BP GO:0044060 regulation of endocrine process IEP Predict GO terms from Neighborhoods
CC GO:0044309 neuron spine IEP Predict GO terms from Neighborhoods
BP GO:0044782 cilium organization IEP Predict GO terms from Neighborhoods
BP GO:0045046 protein import into peroxisome membrane IEP Predict GO terms from Neighborhoods
BP GO:0046324 regulation of glucose import IEP Predict GO terms from Neighborhoods
BP GO:0046326 positive regulation of glucose import IEP Predict GO terms from Neighborhoods
BP GO:0046425 regulation of receptor signaling pathway via JAK-STAT IEP Predict GO terms from Neighborhoods
BP GO:0046426 negative regulation of receptor signaling pathway via JAK-STAT IEP Predict GO terms from Neighborhoods
BP GO:0046883 regulation of hormone secretion IEP Predict GO terms from Neighborhoods
BP GO:0046887 positive regulation of hormone secretion IEP Predict GO terms from Neighborhoods
BP GO:0048167 regulation of synaptic plasticity IEP Predict GO terms from Neighborhoods
BP GO:0048168 regulation of neuronal synaptic plasticity IEP Predict GO terms from Neighborhoods
BP GO:0048169 regulation of long-term neuronal synaptic plasticity IEP Predict GO terms from Neighborhoods
BP GO:0048210 Golgi vesicle fusion to target membrane IEP Predict GO terms from Neighborhoods
BP GO:0048278 vesicle docking IEP Predict GO terms from Neighborhoods
BP GO:0048440 carpel development IEP Predict GO terms from Neighborhoods
BP GO:0048534 hematopoietic or lymphoid organ development IEP Predict GO terms from Neighborhoods
BP GO:0048812 neuron projection morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0048858 cell projection morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0050708 regulation of protein secretion IEP Predict GO terms from Neighborhoods
BP GO:0050714 positive regulation of protein secretion IEP Predict GO terms from Neighborhoods
BP GO:0050792 regulation of viral process IEP Predict GO terms from Neighborhoods
BP GO:0050796 regulation of insulin secretion IEP Predict GO terms from Neighborhoods
BP GO:0050982 detection of mechanical stimulus IEP Predict GO terms from Neighborhoods
BP GO:0051046 regulation of secretion IEP Predict GO terms from Neighborhoods
BP GO:0051047 positive regulation of secretion IEP Predict GO terms from Neighborhoods
BP GO:0051050 positive regulation of transport IEP Predict GO terms from Neighborhoods
BP GO:0051174 regulation of phosphorus metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0051222 positive regulation of protein transport IEP Predict GO terms from Neighborhoods
BP GO:0051223 regulation of protein transport IEP Predict GO terms from Neighborhoods
BP GO:0051274 beta-glucan biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0051459 regulation of corticotropin secretion IEP Predict GO terms from Neighborhoods
BP GO:0051461 positive regulation of corticotropin secretion IEP Predict GO terms from Neighborhoods
BP GO:0051600 regulation of endocytosis by exocyst localization IEP Predict GO terms from Neighborhoods
BP GO:0051601 exocyst localization IEP Predict GO terms from Neighborhoods
CC GO:0055038 recycling endosome membrane IEP Predict GO terms from Neighborhoods
BP GO:0055090 acylglycerol homeostasis IEP Predict GO terms from Neighborhoods
MF GO:0055100 adiponectin binding IEP Predict GO terms from Neighborhoods
BP GO:0060055 angiogenesis involved in wound healing IEP Predict GO terms from Neighborhoods
BP GO:0060176 regulation of aggregation involved in sorocarp development IEP Predict GO terms from Neighborhoods
BP GO:0060271 cilium assembly IEP Predict GO terms from Neighborhoods
BP GO:0060341 regulation of cellular localization IEP Predict GO terms from Neighborhoods
BP GO:0061025 membrane fusion IEP Predict GO terms from Neighborhoods
BP GO:0061042 vascular wound healing IEP Predict GO terms from Neighborhoods
BP GO:0061951 establishment of protein localization to plasma membrane IEP Predict GO terms from Neighborhoods
BP GO:0062237 protein localization to postsynapse IEP Predict GO terms from Neighborhoods
BP GO:0070201 regulation of establishment of protein localization IEP Predict GO terms from Neighborhoods
BP GO:0070328 triglyceride homeostasis IEP Predict GO terms from Neighborhoods
CC GO:0070382 exocytic vesicle IEP Predict GO terms from Neighborhoods
CC GO:0070691 P-TEFb complex IEP Predict GO terms from Neighborhoods
CC GO:0070692 CTDK-1 complex IEP Predict GO terms from Neighborhoods
CC GO:0070693 P-TEFb-cap methyltransferase complex IEP Predict GO terms from Neighborhoods
BP GO:0070816 phosphorylation of RNA polymerase II C-terminal domain IEP Predict GO terms from Neighborhoods
BP GO:0071375 cellular response to peptide hormone stimulus IEP Predict GO terms from Neighborhoods
BP GO:0072662 protein localization to peroxisome IEP Predict GO terms from Neighborhoods
BP GO:0072663 establishment of protein localization to peroxisome IEP Predict GO terms from Neighborhoods
BP GO:0090087 regulation of peptide transport IEP Predict GO terms from Neighborhoods
BP GO:0090174 organelle membrane fusion IEP Predict GO terms from Neighborhoods
BP GO:0090276 regulation of peptide hormone secretion IEP Predict GO terms from Neighborhoods
BP GO:0090277 positive regulation of peptide hormone secretion IEP Predict GO terms from Neighborhoods
BP GO:0090522 vesicle tethering involved in exocytosis IEP Predict GO terms from Neighborhoods
MF GO:0097003 adipokinetic hormone receptor activity IEP Predict GO terms from Neighborhoods
BP GO:0097120 receptor localization to synapse IEP Predict GO terms from Neighborhoods
BP GO:0097468 programmed cell death in response to reactive oxygen species IEP Predict GO terms from Neighborhoods
MF GO:0097472 cyclin-dependent protein kinase activity IEP Predict GO terms from Neighborhoods
CC GO:0097546 ciliary base IEP Predict GO terms from Neighborhoods
CC GO:0097730 non-motile cilium IEP Predict GO terms from Neighborhoods
BP GO:0098609 cell-cell adhesion IEP Predict GO terms from Neighborhoods
BP GO:0098742 cell-cell adhesion via plasma-membrane adhesion molecules IEP Predict GO terms from Neighborhoods
CC GO:0098794 postsynapse IEP Predict GO terms from Neighborhoods
BP GO:0098876 vesicle-mediated transport to the plasma membrane IEP Predict GO terms from Neighborhoods
BP GO:0098877 neurotransmitter receptor transport to plasma membrane IEP Predict GO terms from Neighborhoods
BP GO:0098887 neurotransmitter receptor transport, endosome to postsynaptic membrane IEP Predict GO terms from Neighborhoods
BP GO:0098969 neurotransmitter receptor transport to postsynaptic membrane IEP Predict GO terms from Neighborhoods
BP GO:0099003 vesicle-mediated transport in synapse IEP Predict GO terms from Neighborhoods
BP GO:0099022 vesicle tethering IEP Predict GO terms from Neighborhoods
BP GO:0099072 regulation of postsynaptic membrane neurotransmitter receptor levels IEP Predict GO terms from Neighborhoods
BP GO:0099637 neurotransmitter receptor transport IEP Predict GO terms from Neighborhoods
BP GO:0099638 endosome to plasma membrane protein transport IEP Predict GO terms from Neighborhoods
BP GO:0099639 neurotransmitter receptor transport, endosome to plasma membrane IEP Predict GO terms from Neighborhoods
BP GO:0120031 plasma membrane bounded cell projection assembly IEP Predict GO terms from Neighborhoods
BP GO:0120039 plasma membrane bounded cell projection morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0120161 regulation of cold-induced thermogenesis IEP Predict GO terms from Neighborhoods
BP GO:0120162 positive regulation of cold-induced thermogenesis IEP Predict GO terms from Neighborhoods
BP GO:0140025 contractile vacuole tethering involved in discharge IEP Predict GO terms from Neighborhoods
BP GO:0140029 exocytic process IEP Predict GO terms from Neighborhoods
BP GO:0140056 organelle localization by membrane tethering IEP Predict GO terms from Neighborhoods
CC GO:0140220 pathogen-containing vacuole IEP Predict GO terms from Neighborhoods
BP GO:0150115 cell-substrate junction organization IEP Predict GO terms from Neighborhoods
BP GO:1901222 regulation of NIK/NF-kappaB signaling IEP Predict GO terms from Neighborhoods
BP GO:1901223 negative regulation of NIK/NF-kappaB signaling IEP Predict GO terms from Neighborhoods
BP GO:1901653 cellular response to peptide IEP Predict GO terms from Neighborhoods
BP GO:1902288 regulation of defense response to oomycetes IEP Predict GO terms from Neighborhoods
BP GO:1902290 positive regulation of defense response to oomycetes IEP Predict GO terms from Neighborhoods
BP GO:1902414 protein localization to cell junction IEP Predict GO terms from Neighborhoods
CC GO:1902554 serine/threonine protein kinase complex IEP Predict GO terms from Neighborhoods
CC GO:1902911 protein kinase complex IEP Predict GO terms from Neighborhoods
BP GO:1903530 regulation of secretion by cell IEP Predict GO terms from Neighborhoods
BP GO:1903532 positive regulation of secretion by cell IEP Predict GO terms from Neighborhoods
BP GO:1903539 protein localization to postsynaptic membrane IEP Predict GO terms from Neighborhoods
BP GO:1903540 establishment of protein localization to postsynaptic membrane IEP Predict GO terms from Neighborhoods
BP GO:1904892 regulation of receptor signaling pathway via STAT IEP Predict GO terms from Neighborhoods
BP GO:1904893 negative regulation of receptor signaling pathway via STAT IEP Predict GO terms from Neighborhoods
BP GO:2000014 regulation of endosperm development IEP Predict GO terms from Neighborhoods
BP GO:2000031 regulation of salicylic acid mediated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:2000146 negative regulation of cell motility IEP Predict GO terms from Neighborhoods
BP GO:2000736 regulation of stem cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:2000737 negative regulation of stem cell differentiation IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR000504 RRM_dom 342 400
IPR032710 NTF2-like_dom_sf 56 175
IPR035979 RBD_domain_sf 337 446
IPR002075 NTF2_dom 59 175
No external refs found!