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  5. SOLTUB.AGRIA.G00000008970

SOLTUB.AGRIA.G00000008970


Description : Surfeit locus protein 2 (SURF2)


Gene families : OG_02_0008249 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000008970
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_171


Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEA AHRD
CC GO:0005654 nucleoplasm IEA AHRD
CC GO:0005730 nucleolus IEA AHRD
CC GO:0005886 plasma membrane IEA AHRD
BP GO:0008150 biological_process IEA AHRD
CC GO:0016607 nuclear speck IEA AHRD
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Type GO Term Name Evidence Source
BP GO:0000028 ribosomal small subunit assembly IEP Predict GO terms from Neighborhoods
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Predict GO terms from Neighborhoods
BP GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEP Predict GO terms from Neighborhoods
BP GO:0000478 endonucleolytic cleavage involved in rRNA processing IEP Predict GO terms from Neighborhoods
BP GO:0000479 endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEP Predict GO terms from Neighborhoods
BP GO:0000966 RNA 5'-end processing IEP Predict GO terms from Neighborhoods
BP GO:0000967 rRNA 5'-end processing IEP Predict GO terms from Neighborhoods
MF GO:0001091 RNA polymerase II general transcription initiation factor binding IEP Predict GO terms from Neighborhoods
MF GO:0001094 TFIID-class transcription factor complex binding IEP Predict GO terms from Neighborhoods
MF GO:0001098 basal transcription machinery binding IEP Predict GO terms from Neighborhoods
MF GO:0001099 basal RNA polymerase II transcription machinery binding IEP Predict GO terms from Neighborhoods
CC GO:0001650 fibrillar center IEP Predict GO terms from Neighborhoods
BP GO:0001825 blastocyst formation IEP Predict GO terms from Neighborhoods
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Predict GO terms from Neighborhoods
MF GO:0005527 macrolide binding IEP Predict GO terms from Neighborhoods
MF GO:0005528 FK506 binding IEP Predict GO terms from Neighborhoods
CC GO:0005732 sno(s)RNA-containing ribonucleoprotein complex IEP Predict GO terms from Neighborhoods
CC GO:0005771 multivesicular body IEP Predict GO terms from Neighborhoods
CC GO:0005795 Golgi stack IEP Predict GO terms from Neighborhoods
BP GO:0006139 nucleobase-containing compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006334 nucleosome assembly IEP Predict GO terms from Neighborhoods
BP GO:0006364 rRNA processing IEP Predict GO terms from Neighborhoods
BP GO:0006396 RNA processing IEP Predict GO terms from Neighborhoods
BP GO:0006403 RNA localization IEP Predict GO terms from Neighborhoods
MF GO:0008327 methyl-CpG binding IEP Predict GO terms from Neighborhoods
BP GO:0010275 NAD(P)H dehydrogenase complex assembly IEP Predict GO terms from Neighborhoods
BP GO:0010507 negative regulation of autophagy IEP Predict GO terms from Neighborhoods
CC GO:0015030 Cajal body IEP Predict GO terms from Neighborhoods
MF GO:0016018 cyclosporin A binding IEP Predict GO terms from Neighborhoods
BP GO:0016070 RNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0016072 rRNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0016241 regulation of macroautophagy IEP Predict GO terms from Neighborhoods
BP GO:0016242 negative regulation of macroautophagy IEP Predict GO terms from Neighborhoods
MF GO:0016853 isomerase activity IEP Predict GO terms from Neighborhoods
MF GO:0016859 cis-trans isomerase activity IEP Predict GO terms from Neighborhoods
BP GO:0018208 peptidyl-proline modification IEP Predict GO terms from Neighborhoods
BP GO:0030447 filamentous growth IEP Predict GO terms from Neighborhoods
MF GO:0030515 snoRNA binding IEP Predict GO terms from Neighborhoods
CC GO:0031428 box C/D RNP complex IEP Predict GO terms from Neighborhoods
CC GO:0032040 small-subunit processome IEP Predict GO terms from Neighborhoods
CC GO:0032545 CURI complex IEP Predict GO terms from Neighborhoods
MF GO:0033218 amide binding IEP Predict GO terms from Neighborhoods
BP GO:0033313 meiotic cell cycle checkpoint signaling IEP Predict GO terms from Neighborhoods
CC GO:0034456 UTP-C complex IEP Predict GO terms from Neighborhoods
BP GO:0034470 ncRNA processing IEP Predict GO terms from Neighborhoods
BP GO:0034471 ncRNA 5'-end processing IEP Predict GO terms from Neighborhoods
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0034660 ncRNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0035626 juvenile hormone mediated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0036260 RNA capping IEP Predict GO terms from Neighborhoods
BP GO:0040020 regulation of meiotic nuclear division IEP Predict GO terms from Neighborhoods
BP GO:0043170 macromolecule metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0043933 protein-containing complex organization IEP Predict GO terms from Neighborhoods
BP GO:0045835 negative regulation of meiotic nuclear division IEP Predict GO terms from Neighborhoods
BP GO:0046483 heterocycle metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0048254 snoRNA localization IEP Predict GO terms from Neighborhoods
MF GO:0051117 ATPase binding IEP Predict GO terms from Neighborhoods
BP GO:0051447 negative regulation of meiotic cell cycle IEP Predict GO terms from Neighborhoods
BP GO:0051598 meiotic recombination checkpoint signaling IEP Predict GO terms from Neighborhoods
BP GO:0051784 negative regulation of nuclear division IEP Predict GO terms from Neighborhoods
BP GO:0061083 regulation of protein refolding IEP Predict GO terms from Neighborhoods
BP GO:0065003 protein-containing complex assembly IEP Predict GO terms from Neighborhoods
MF GO:0070594 juvenile hormone response element binding IEP Predict GO terms from Neighborhoods
CC GO:0070761 pre-snoRNP complex IEP Predict GO terms from Neighborhoods
BP GO:0090304 nucleic acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0090305 nucleic acid phosphodiester bond hydrolysis IEP Predict GO terms from Neighborhoods
MF GO:0140296 general transcription initiation factor binding IEP Predict GO terms from Neighborhoods
BP GO:1903332 regulation of protein folding IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR008833 Surf2 17 258
No external refs found!