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  5. SOLTUB.AGRIA.G00000009235

SOLTUB.AGRIA.G00000009235


Description : Aminotransferase-like, plant mobile domain family protein


Gene families : OG_02_0000035 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000009235
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_177

Target Alias Description ECC score Gene Family Method Actions
SOLTUB.AGRIA.G00000002671 No alias Aminotransferase-like, plant mobile domain family protein 0.25 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000040163 No alias Aminotransferase-like, plant mobile domain family protein 0.33 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000002671 No alias Aminotransferase-like, plant mobile domain family protein 0.25 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000040163 No alias Aminotransferase-like, plant mobile domain family protein 0.33 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000002671 No alias Aminotransferase-like, plant mobile domain family protein 0.25 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000040163 No alias Aminotransferase-like, plant mobile domain family protein 0.33 Orthogroups with 8 Potato genotypes

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001732 formation of cytoplasmic translation initiation complex IEP Predict GO terms from Neighborhoods
MF GO:0003743 translation initiation factor activity IEP Predict GO terms from Neighborhoods
BP GO:0006446 regulation of translational initiation IEP Predict GO terms from Neighborhoods
MF GO:0008135 translation factor activity, RNA binding IEP Predict GO terms from Neighborhoods
CC GO:0033290 eukaryotic 48S preinitiation complex IEP Predict GO terms from Neighborhoods
BP GO:0042255 ribosome assembly IEP Predict GO terms from Neighborhoods
BP GO:0042256 mature ribosome assembly IEP Predict GO terms from Neighborhoods
CC GO:0070993 translation preinitiation complex IEP Predict GO terms from Neighborhoods
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR019557 AminoTfrase-like_pln_mobile 69 442
No external refs found!