SOLTUB.AGRIA.G00000009716


Description : S-RNase


Gene families : OG_02_0013510 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000009716
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_484


Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP Predict GO terms from Neighborhoods
MF GO:0004519 endonuclease activity IEP Predict GO terms from Neighborhoods
MF GO:0004521 endoribonuclease activity IEP Predict GO terms from Neighborhoods
MF GO:0004540 ribonuclease activity IEP Predict GO terms from Neighborhoods
BP GO:0006401 RNA catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0007154 cell communication IEP Predict GO terms from Neighborhoods
BP GO:0009057 macromolecule catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009267 cellular response to starvation IEP Predict GO terms from Neighborhoods
BP GO:0009611 response to wounding IEP Predict GO terms from Neighborhoods
BP GO:0009718 anthocyanin-containing compound biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009812 flavonoid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009813 flavonoid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009991 response to extracellular stimulus IEP Predict GO terms from Neighborhoods
BP GO:0016036 cellular response to phosphate starvation IEP Predict GO terms from Neighborhoods
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Predict GO terms from Neighborhoods
MF GO:0016829 lyase activity IEP Predict GO terms from Neighborhoods
MF GO:0016849 phosphorus-oxygen lyase activity IEP Predict GO terms from Neighborhoods
BP GO:0019439 aromatic compound catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0031667 response to nutrient levels IEP Predict GO terms from Neighborhoods
BP GO:0031668 cellular response to extracellular stimulus IEP Predict GO terms from Neighborhoods
BP GO:0031669 cellular response to nutrient levels IEP Predict GO terms from Neighborhoods
MF GO:0033897 ribonuclease T2 activity IEP Predict GO terms from Neighborhoods
BP GO:0034655 nucleobase-containing compound catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0042440 pigment metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0042594 response to starvation IEP Predict GO terms from Neighborhoods
BP GO:0044265 cellular macromolecule catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0044270 cellular nitrogen compound catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046148 pigment biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0046283 anthocyanin-containing compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046700 heterocycle catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0071496 cellular response to external stimulus IEP Predict GO terms from Neighborhoods
BP GO:0090305 nucleic acid phosphodiester bond hydrolysis IEP Predict GO terms from Neighborhoods
BP GO:0090501 RNA phosphodiester bond hydrolysis IEP Predict GO terms from Neighborhoods
BP GO:0090502 RNA phosphodiester bond hydrolysis, endonucleolytic IEP Predict GO terms from Neighborhoods
MF GO:0140098 catalytic activity, acting on RNA IEP Predict GO terms from Neighborhoods
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP Predict GO terms from Neighborhoods
BP GO:1901361 organic cyclic compound catabolic process IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR036430 RNase_T2-like_sf 1 45
IPR001568 RNase_T2-like 2 37
No external refs found!