SOLTUB.AGRIA.G00000009736

Description : ribosomal RNA-processing 7 protein

Gene families : OG_02_0024256 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000009736
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_171

Type	GO Term	Name	Evidence	Source
BP	GO:0000028	ribosomal small subunit assembly	IEA	AHRD
BP	GO:0001825	blastocyst formation	IEA	AHRD
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	AHRD
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005737	cytoplasm	IEA	AHRD
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006364	rRNA processing	IEA	AHRD
BP	GO:0006396	RNA processing	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0016072	rRNA metabolic process	None	Extended
BP	GO:0022607	cellular component assembly	None	Extended
BP	GO:0022618	ribonucleoprotein complex assembly	None	Extended
BP	GO:0032502	developmental process	None	Extended
CC	GO:0032545	CURI complex	IEA	AHRD
CC	GO:0032991	protein-containing complex	None	Extended
CC	GO:0034456	UTP-C complex	IEA	AHRD
BP	GO:0034470	ncRNA processing	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034660	ncRNA metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043933	protein-containing complex organization	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0048646	anatomical structure formation involved in morphogenesis	None	Extended
BP	GO:0065003	protein-containing complex assembly	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071826	ribonucleoprotein complex subunit organization	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
CC	GO:0140513	nuclear protein-containing complex	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000122	negative regulation of transcription by RNA polymerase II	IEP	Predict GO terms from Neighborhoods
MF	GO:0001671	ATPase activator activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0001732	formation of cytoplasmic translation initiation complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0001835	blastocyst hatching	IEP	Predict GO terms from Neighborhoods
BP	GO:0002021	response to dietary excess	IEP	Predict GO terms from Neighborhoods
MF	GO:0003712	transcription coregulator activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0005657	replication fork	IEP	Predict GO terms from Neighborhoods
CC	GO:0005685	U1 snRNP	IEP	Predict GO terms from Neighborhoods
BP	GO:0006270	DNA replication initiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0006271	DNA strand elongation involved in DNA replication	IEP	Predict GO terms from Neighborhoods
BP	GO:0006325	chromatin organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0006338	chromatin remodeling	IEP	Predict GO terms from Neighborhoods
BP	GO:0006928	obsolete movement of cell or subcellular component	IEP	Predict GO terms from Neighborhoods
BP	GO:0007605	sensory perception of sound	IEP	Predict GO terms from Neighborhoods
MF	GO:0008013	beta-catenin binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0008587	imaginal disc-derived wing margin morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0008593	regulation of Notch signaling pathway	IEP	Predict GO terms from Neighborhoods
CC	GO:0008622	epsilon DNA polymerase complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0008623	CHRAC	IEP	Predict GO terms from Neighborhoods
BP	GO:0010468	regulation of gene expression	IEP	Predict GO terms from Neighborhoods
BP	GO:0010721	negative regulation of cell development	IEP	Predict GO terms from Neighborhoods
CC	GO:0016607	nuclear speck	IEP	Predict GO terms from Neighborhoods
CC	GO:0017053	transcription repressor complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0022416	chaeta development	IEP	Predict GO terms from Neighborhoods
BP	GO:0022616	DNA strand elongation	IEP	Predict GO terms from Neighborhoods
CC	GO:0030018	Z disc	IEP	Predict GO terms from Neighborhoods
BP	GO:0030150	protein import into mitochondrial matrix	IEP	Predict GO terms from Neighborhoods
MF	GO:0030337	DNA polymerase processivity factor activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0031010	ISWI-type complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0031063	regulation of histone deacetylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0031065	positive regulation of histone deacetylation	IEP	Predict GO terms from Neighborhoods
MF	GO:0031072	heat shock protein binding	IEP	Predict GO terms from Neighborhoods
CC	GO:0031300	intrinsic component of organelle membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0031301	integral component of organelle membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0031306	intrinsic component of mitochondrial outer membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0031307	integral component of mitochondrial outer membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0031647	regulation of protein stability	IEP	Predict GO terms from Neighborhoods
CC	GO:0032592	integral component of mitochondrial membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0032781	positive regulation of ATP-dependent activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0032873	negative regulation of stress-activated MAPK cascade	IEP	Predict GO terms from Neighborhoods
CC	GO:0033290	eukaryotic 48S preinitiation complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0034663	endoplasmic reticulum chaperone complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0035188	hatching	IEP	Predict GO terms from Neighborhoods
BP	GO:0035967	cellular response to topologically incorrect protein	IEP	Predict GO terms from Neighborhoods
BP	GO:0042058	regulation of epidermal growth factor receptor signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0042255	ribosome assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0042256	mature ribosome assembly	IEP	Predict GO terms from Neighborhoods
MF	GO:0042393	histone binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0042461	photoreceptor cell development	IEP	Predict GO terms from Neighborhoods
CC	GO:0042575	DNA polymerase complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0042689	regulation of crystal cell differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0042691	positive regulation of crystal cell differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0042766	obsolete nucleosome mobilization	IEP	Predict GO terms from Neighborhoods
BP	GO:0043486	histone exchange	IEP	Predict GO terms from Neighborhoods
BP	GO:0043524	negative regulation of neuron apoptotic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0043596	nuclear replication fork	IEP	Predict GO terms from Neighborhoods
BP	GO:0043627	response to estrogen	IEP	Predict GO terms from Neighborhoods
BP	GO:0044743	protein transmembrane import into intracellular organelle	IEP	Predict GO terms from Neighborhoods
BP	GO:0045292	mRNA cis splicing, via spliceosome	IEP	Predict GO terms from Neighborhoods
BP	GO:0045444	fat cell differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0045570	regulation of imaginal disc growth	IEP	Predict GO terms from Neighborhoods
BP	GO:0045572	positive regulation of imaginal disc growth	IEP	Predict GO terms from Neighborhoods
BP	GO:0045610	regulation of hemocyte differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0045612	positive regulation of hemocyte differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0045747	positive regulation of Notch signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0046328	regulation of JNK cascade	IEP	Predict GO terms from Neighborhoods
BP	GO:0046329	negative regulation of JNK cascade	IEP	Predict GO terms from Neighborhoods
BP	GO:0050768	negative regulation of neurogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0050821	protein stabilization	IEP	Predict GO terms from Neighborhoods
BP	GO:0050872	white fat cell differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0050954	sensory perception of mechanical stimulus	IEP	Predict GO terms from Neighborhoods
MF	GO:0051787	misfolded protein binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0051788	response to misfolded protein	IEP	Predict GO terms from Neighborhoods
BP	GO:0051961	negative regulation of nervous system development	IEP	Predict GO terms from Neighborhoods
BP	GO:0060255	regulation of macromolecule metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0060612	adipose tissue development	IEP	Predict GO terms from Neighborhoods
BP	GO:0060613	fat pad development	IEP	Predict GO terms from Neighborhoods
BP	GO:0061448	connective tissue development	IEP	Predict GO terms from Neighborhoods
BP	GO:0070050	neuron cellular homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0070303	negative regulation of stress-activated protein kinase signaling cascade	IEP	Predict GO terms from Neighborhoods
CC	GO:0070993	translation preinitiation complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0071004	U2-type prespliceosome	IEP	Predict GO terms from Neighborhoods
CC	GO:0071010	prespliceosome	IEP	Predict GO terms from Neighborhoods
BP	GO:0071163	DNA replication preinitiation complex assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0071218	cellular response to misfolded protein	IEP	Predict GO terms from Neighborhoods
BP	GO:0071684	organism emergence from protective structure	IEP	Predict GO terms from Neighborhoods
BP	GO:0071824	protein-DNA complex subunit organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0090207	regulation of triglyceride metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0090311	regulation of protein deacetylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0090312	positive regulation of protein deacetylation	IEP	Predict GO terms from Neighborhoods
CC	GO:0101031	chaperone complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0140529	CMG complex assembly	IEP	Predict GO terms from Neighborhoods
CC	GO:0140535	intracellular protein-containing complex	IEP	Predict GO terms from Neighborhoods
MF	GO:0140677	molecular function activator activity	IEP	Predict GO terms from Neighborhoods
BP	GO:1901184	regulation of ERBB signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:1902292	cell cycle DNA replication initiation	IEP	Predict GO terms from Neighborhoods
BP	GO:1902296	DNA strand elongation involved in cell cycle DNA replication	IEP	Predict GO terms from Neighborhoods
BP	GO:1902315	nuclear cell cycle DNA replication initiation	IEP	Predict GO terms from Neighborhoods
BP	GO:1902319	DNA strand elongation involved in nuclear cell cycle DNA replication	IEP	Predict GO terms from Neighborhoods
BP	GO:1902975	mitotic DNA replication initiation	IEP	Predict GO terms from Neighborhoods
BP	GO:1902983	DNA strand elongation involved in mitotic DNA replication	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR024326	RRP7_C	197	319

External Links

No external refs found!

SOLTUB.AGRIA.G00000009736

Expression Profile

Co-expression Networks

Functional Annotation