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  5. SOLTUB.AGRIA.G00000009898

SOLTUB.AGRIA.G00000009898


Description : Pectin lyase-like superfamily protein


Gene families : OG_02_0005658 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000009898
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_247


Type GO Term Name Evidence Source
BP GO:0007275 multicellular organism development IEA AHRD
MF GO:0016787 hydrolase activity IEA AHRD
BP GO:0022414 reproductive process IEA AHRD
CC GO:0110165 cellular anatomical entity IEA AHRD
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Type GO Term Name Evidence Source
CC GO:0005681 spliceosomal complex IEP Predict GO terms from Neighborhoods
CC GO:0005741 mitochondrial outer membrane IEP Predict GO terms from Neighborhoods
BP GO:0006473 protein acetylation IEP Predict GO terms from Neighborhoods
BP GO:0006475 internal protein amino acid acetylation IEP Predict GO terms from Neighborhoods
BP GO:0006996 organelle organization IEP Predict GO terms from Neighborhoods
BP GO:0007033 vacuole organization IEP Predict GO terms from Neighborhoods
CC GO:0008021 synaptic vesicle IEP Predict GO terms from Neighborhoods
BP GO:0008340 determination of adult lifespan IEP Predict GO terms from Neighborhoods
BP GO:0016573 histone acetylation IEP Predict GO terms from Neighborhoods
BP GO:0018393 internal peptidyl-lysine acetylation IEP Predict GO terms from Neighborhoods
BP GO:0018394 peptidyl-lysine acetylation IEP Predict GO terms from Neighborhoods
CC GO:0019867 outer membrane IEP Predict GO terms from Neighborhoods
CC GO:0030133 transport vesicle IEP Predict GO terms from Neighborhoods
CC GO:0030424 axon IEP Predict GO terms from Neighborhoods
CC GO:0031410 cytoplasmic vesicle IEP Predict GO terms from Neighborhoods
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP Predict GO terms from Neighborhoods
CC GO:0031966 mitochondrial membrane IEP Predict GO terms from Neighborhoods
CC GO:0031968 organelle outer membrane IEP Predict GO terms from Neighborhoods
CC GO:0031982 vesicle IEP Predict GO terms from Neighborhoods
CC GO:0034708 methyltransferase complex IEP Predict GO terms from Neighborhoods
CC GO:0035097 histone methyltransferase complex IEP Predict GO terms from Neighborhoods
BP GO:0040014 regulation of multicellular organism growth IEP Predict GO terms from Neighborhoods
BP GO:0040018 positive regulation of multicellular organism growth IEP Predict GO terms from Neighborhoods
CC GO:0043025 neuronal cell body IEP Predict GO terms from Neighborhoods
BP GO:0043543 protein acylation IEP Predict GO terms from Neighborhoods
CC GO:0044297 cell body IEP Predict GO terms from Neighborhoods
BP GO:0045927 positive regulation of growth IEP Predict GO terms from Neighborhoods
BP GO:0048585 negative regulation of response to stimulus IEP Predict GO terms from Neighborhoods
BP GO:0048639 positive regulation of developmental growth IEP Predict GO terms from Neighborhoods
CC GO:0055120 striated muscle dense body IEP Predict GO terms from Neighborhoods
CC GO:0070382 exocytic vesicle IEP Predict GO terms from Neighborhoods
CC GO:0080008 Cul4-RING E3 ubiquitin ligase complex IEP Predict GO terms from Neighborhoods
CC GO:0097708 intracellular vesicle IEP Predict GO terms from Neighborhoods
CC GO:0098588 bounding membrane of organelle IEP Predict GO terms from Neighborhoods
BP GO:0098876 vesicle-mediated transport to the plasma membrane IEP Predict GO terms from Neighborhoods
CC GO:0099503 secretory vesicle IEP Predict GO terms from Neighborhoods
BP GO:1900457 regulation of brassinosteroid mediated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:1900458 negative regulation of brassinosteroid mediated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:1901214 regulation of neuron death IEP Predict GO terms from Neighborhoods
BP GO:1901216 positive regulation of neuron death IEP Predict GO terms from Neighborhoods
BP GO:1905802 regulation of cellular response to manganese ion IEP Predict GO terms from Neighborhoods
BP GO:1905803 negative regulation of cellular response to manganese ion IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR011050 Pectin_lyase_fold/virulence 29 416
IPR000743 Glyco_hydro_28 138 418
No external refs found!