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  5. SOLTUB.AGRIA.G00000010350

SOLTUB.AGRIA.G00000010350


Description : Alpha-amylase


Gene families : OG_02_0002089 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000010350
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_495


Type GO Term Name Evidence Source
MF GO:0004556 alpha-amylase activity IEA AHRD
MF GO:0005509 calcium ion binding IEA AHRD
MF GO:0005515 protein binding IEA AHRD
BP GO:0005983 starch catabolic process IEA AHRD
BP GO:0005987 sucrose catabolic process IEA AHRD
CC GO:0009570 chloroplast stroma IEA AHRD
BP GO:0009737 response to abscisic acid IEA AHRD
BP GO:0009739 response to gibberellin IEA AHRD
CC GO:0048046 apoplast IEA AHRD
Toggle parental
Type GO Term Name Evidence Source
CC GO:0005615 extracellular space IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR017853 Glycoside_hydrolase_SF 23 359
IPR012850 A-amylase_bs_C 358 416
IPR006047 Glyco_hydro_13_cat_dom 52 202
No external refs found!