Description : Retrovirus-related pol polyprotein from transposon tnt 1-94
Gene families : OG_02_0002347 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000001026 | |
| Cluster | HCCA Clusters (HRR 50 & PCC 0.5): Cluster_250 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| SOLTUB.AGRIA.G00000000988 | No alias | Retrovirus-related pol polyprotein from transposon tnt 1-94 | 0.1 | Orthogroups with 8 Potato genotypes | |
| SOLTUB.AGRIA.G00000000993 | No alias | Copia-like polyprotein/retrotransposon | 0.11 | Orthogroups with 8 Potato genotypes | |
| SOLTUB.AGRIA.G00000000988 | No alias | Retrovirus-related pol polyprotein from transposon tnt 1-94 | 0.1 | Orthogroups with 8 Potato genotypes | |
| SOLTUB.AGRIA.G00000000993 | No alias | Copia-like polyprotein/retrotransposon | 0.11 | Orthogroups with 8 Potato genotypes | |
| SOLTUB.AGRIA.G00000000988 | No alias | Retrovirus-related pol polyprotein from transposon tnt 1-94 | 0.1 | Orthogroups with 8 Potato genotypes | |
| SOLTUB.AGRIA.G00000000993 | No alias | Copia-like polyprotein/retrotransposon | 0.11 | Orthogroups with 8 Potato genotypes |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0001678 | cellular glucose homeostasis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0003018 | vascular process in circulatory system | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006351 | DNA-templated transcription | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006521 | regulation of cellular amino acid metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006971 | hypotonic response | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009299 | mRNA transcription | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0009511 | plasmodesmatal endoplasmic reticulum | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009756 | carbohydrate mediated signaling | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009900 | dehiscence | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009901 | anther dehiscence | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010182 | sugar mediated signaling pathway | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010199 | organ boundary specification between lateral organs and the meristem | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010232 | vascular transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010233 | phloem transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010492 | maintenance of shoot apical meristem identity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010558 | negative regulation of macromolecule biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032055 | negative regulation of translation in response to stress | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0033238 | regulation of cellular amine metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0033500 | carbohydrate homeostasis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042593 | glucose homeostasis | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0042803 | protein homodimerization activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043555 | regulation of translation in response to stress | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048441 | petal development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048832 | specification of plant organ number | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048833 | specification of floral organ number | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048834 | specification of petal number | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048859 | formation of anatomical boundary | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071322 | cellular response to carbohydrate stimulus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071326 | cellular response to monosaccharide stimulus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071331 | cellular response to hexose stimulus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071333 | cellular response to glucose stimulus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0080050 | regulation of seed development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0080149 | sucrose induced translational repression | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0090691 | formation of plant organ boundary | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0097659 | nucleic acid-templated transcription | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0110126 | phloem loading | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2000034 | regulation of seed maturation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2000693 | positive regulation of seed maturation | IEP | Predict GO terms from Neighborhoods |
No InterPro domains available for this sequence
| No external refs found! |