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  5. SOLTUB.AGRIA.G00000010479

SOLTUB.AGRIA.G00000010479


Description : WD40 repeat-containing protein


Gene families : OG_02_0022350 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000010479
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_100


Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA AHRD
CC GO:0005813 centrosome IEA AHRD
CC GO:0036064 ciliary basal body IEA AHRD
BP GO:0090307 mitotic spindle assembly IEA AHRD
BP GO:1902857 positive regulation of non-motile cilium assembly IEA AHRD
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP Predict GO terms from Neighborhoods
CC GO:0000347 THO complex IEP Predict GO terms from Neighborhoods
BP GO:0000727 double-strand break repair via break-induced replication IEP Predict GO terms from Neighborhoods
BP GO:0001704 formation of primary germ layer IEP Predict GO terms from Neighborhoods
BP GO:0001707 mesoderm formation IEP Predict GO terms from Neighborhoods
BP GO:0001894 tissue homeostasis IEP Predict GO terms from Neighborhoods
MF GO:0003688 DNA replication origin binding IEP Predict GO terms from Neighborhoods
MF GO:0003774 cytoskeletal motor activity IEP Predict GO terms from Neighborhoods
MF GO:0003777 microtubule motor activity IEP Predict GO terms from Neighborhoods
MF GO:0004742 dihydrolipoyllysine-residue acetyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0004748 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor IEP Predict GO terms from Neighborhoods
MF GO:0005080 protein kinase C binding IEP Predict GO terms from Neighborhoods
MF GO:0005539 glycosaminoglycan binding IEP Predict GO terms from Neighborhoods
CC GO:0005622 intracellular anatomical structure IEP Predict GO terms from Neighborhoods
CC GO:0005656 nuclear pre-replicative complex IEP Predict GO terms from Neighborhoods
CC GO:0005795 Golgi stack IEP Predict GO terms from Neighborhoods
CC GO:0005874 microtubule IEP Predict GO terms from Neighborhoods
CC GO:0005971 ribonucleoside-diphosphate reductase complex IEP Predict GO terms from Neighborhoods
BP GO:0006084 acetyl-CoA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006085 acetyl-CoA biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0006086 acetyl-CoA biosynthetic process from pyruvate IEP Predict GO terms from Neighborhoods
BP GO:0006091 generation of precursor metabolites and energy IEP Predict GO terms from Neighborhoods
BP GO:0006096 glycolytic process IEP Predict GO terms from Neighborhoods
BP GO:0006206 pyrimidine nucleobase metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006220 pyrimidine nucleotide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006221 pyrimidine nucleotide biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0006235 dTTP biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0006259 DNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006267 pre-replicative complex assembly involved in nuclear cell cycle DNA replication IEP Predict GO terms from Neighborhoods
BP GO:0006268 DNA unwinding involved in DNA replication IEP Predict GO terms from Neighborhoods
BP GO:0006270 DNA replication initiation IEP Predict GO terms from Neighborhoods
BP GO:0006271 DNA strand elongation involved in DNA replication IEP Predict GO terms from Neighborhoods
BP GO:0006281 DNA repair IEP Predict GO terms from Neighborhoods
BP GO:0006307 DNA dealkylation involved in DNA repair IEP Predict GO terms from Neighborhoods
BP GO:0006403 RNA localization IEP Predict GO terms from Neighborhoods
BP GO:0006753 nucleoside phosphate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006757 ATP generation from ADP IEP Predict GO terms from Neighborhoods
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IEP Predict GO terms from Neighborhoods
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP Predict GO terms from Neighborhoods
BP GO:0006919 activation of cysteine-type endopeptidase activity involved in apoptotic process IEP Predict GO terms from Neighborhoods
BP GO:0007049 cell cycle IEP Predict GO terms from Neighborhoods
BP GO:0007097 nuclear migration IEP Predict GO terms from Neighborhoods
BP GO:0007639 homeostasis of number of meristem cells IEP Predict GO terms from Neighborhoods
MF GO:0008017 microtubule binding IEP Predict GO terms from Neighborhoods
MF GO:0008092 cytoskeletal protein binding IEP Predict GO terms from Neighborhoods
MF GO:0008198 ferrous iron binding IEP Predict GO terms from Neighborhoods
BP GO:0008283 cell population proliferation IEP Predict GO terms from Neighborhoods
BP GO:0008298 intracellular mRNA localization IEP Predict GO terms from Neighborhoods
BP GO:0008406 gonad development IEP Predict GO terms from Neighborhoods
MF GO:0008432 JUN kinase binding IEP Predict GO terms from Neighborhoods
MF GO:0008569 minus-end-directed microtubule motor activity IEP Predict GO terms from Neighborhoods
BP GO:0008584 male gonad development IEP Predict GO terms from Neighborhoods
BP GO:0009112 nucleobase metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009117 nucleotide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009141 nucleoside triphosphate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009147 pyrimidine nucleoside triphosphate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009148 pyrimidine nucleoside triphosphate biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009165 nucleotide biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009211 pyrimidine deoxyribonucleoside triphosphate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009212 pyrimidine deoxyribonucleoside triphosphate biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009219 pyrimidine deoxyribonucleotide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009221 pyrimidine deoxyribonucleotide biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009262 deoxyribonucleotide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009263 deoxyribonucleotide biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009265 2'-deoxyribonucleotide biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0009378 four-way junction helicase activity IEP Predict GO terms from Neighborhoods
BP GO:0009394 2'-deoxyribonucleotide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009410 response to xenobiotic stimulus IEP Predict GO terms from Neighborhoods
CC GO:0009511 plasmodesmatal endoplasmic reticulum IEP Predict GO terms from Neighborhoods
BP GO:0009720 detection of hormone stimulus IEP Predict GO terms from Neighborhoods
BP GO:0009726 detection of endogenous stimulus IEP Predict GO terms from Neighborhoods
BP GO:0009729 detection of brassinosteroid stimulus IEP Predict GO terms from Neighborhoods
CC GO:0010008 endosome membrane IEP Predict GO terms from Neighborhoods
BP GO:0010883 regulation of lipid storage IEP Predict GO terms from Neighborhoods
BP GO:0010930 negative regulation of auxin mediated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0010950 positive regulation of endopeptidase activity IEP Predict GO terms from Neighborhoods
BP GO:0010952 positive regulation of peptidase activity IEP Predict GO terms from Neighborhoods
MF GO:0015026 coreceptor activity IEP Predict GO terms from Neighborhoods
MF GO:0015631 tubulin binding IEP Predict GO terms from Neighborhoods
MF GO:0016417 S-acyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0016418 S-acetyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP Predict GO terms from Neighborhoods
MF GO:0016728 oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor IEP Predict GO terms from Neighborhoods
MF GO:0017116 single-stranded DNA helicase activity IEP Predict GO terms from Neighborhoods
BP GO:0019692 deoxyribose phosphate metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0019901 protein kinase binding IEP Predict GO terms from Neighborhoods
MF GO:0019904 protein domain specific binding IEP Predict GO terms from Neighborhoods
BP GO:0021846 cell proliferation in forebrain IEP Predict GO terms from Neighborhoods
BP GO:0022616 DNA strand elongation IEP Predict GO terms from Neighborhoods
CC GO:0030117 membrane coat IEP Predict GO terms from Neighborhoods
CC GO:0030120 vesicle coat IEP Predict GO terms from Neighborhoods
CC GO:0030126 COPI vesicle coat IEP Predict GO terms from Neighborhoods
BP GO:0030174 regulation of DNA-templated DNA replication initiation IEP Predict GO terms from Neighborhoods
BP GO:0030336 negative regulation of cell migration IEP Predict GO terms from Neighborhoods
BP GO:0030466 silent mating-type cassette heterochromatin formation IEP Predict GO terms from Neighborhoods
MF GO:0030523 dihydrolipoamide S-acyltransferase activity IEP Predict GO terms from Neighborhoods
CC GO:0030658 transport vesicle membrane IEP Predict GO terms from Neighborhoods
CC GO:0030659 cytoplasmic vesicle membrane IEP Predict GO terms from Neighborhoods
CC GO:0030672 synaptic vesicle membrane IEP Predict GO terms from Neighborhoods
CC GO:0031224 intrinsic component of membrane IEP Predict GO terms from Neighborhoods
CC GO:0031225 anchored component of membrane IEP Predict GO terms from Neighborhoods
CC GO:0031226 intrinsic component of plasma membrane IEP Predict GO terms from Neighborhoods
CC GO:0031261 DNA replication preinitiation complex IEP Predict GO terms from Neighborhoods
BP GO:0031288 sorocarp morphogenesis IEP Predict GO terms from Neighborhoods
CC GO:0031298 replication fork protection complex IEP Predict GO terms from Neighborhoods
BP GO:0031534 minus-end directed microtubule sliding IEP Predict GO terms from Neighborhoods
CC GO:0031902 late endosome membrane IEP Predict GO terms from Neighborhoods
CC GO:0031984 organelle subcompartment IEP Predict GO terms from Neighborhoods
MF GO:0032451 demethylase activity IEP Predict GO terms from Neighborhoods
BP GO:0032509 endosome transport via multivesicular body sorting pathway IEP Predict GO terms from Neighborhoods
BP GO:0032511 late endosome to vacuole transport via multivesicular body sorting pathway IEP Predict GO terms from Neighborhoods
CC GO:0032993 protein-DNA complex IEP Predict GO terms from Neighborhoods
MF GO:0033677 DNA/RNA helicase activity IEP Predict GO terms from Neighborhoods
MF GO:0033679 3'-5' DNA/RNA helicase activity IEP Predict GO terms from Neighborhoods
BP GO:0033866 nucleoside bisphosphate biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0034030 ribonucleoside bisphosphate biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0034033 purine nucleoside bisphosphate biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0035384 thioester biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0035510 DNA dealkylation IEP Predict GO terms from Neighborhoods
BP GO:0035511 oxidative DNA demethylation IEP Predict GO terms from Neighborhoods
MF GO:0035514 DNA demethylase activity IEP Predict GO terms from Neighborhoods
CC GO:0036387 pre-replicative complex IEP Predict GO terms from Neighborhoods
BP GO:0036388 pre-replicative complex assembly IEP Predict GO terms from Neighborhoods
BP GO:0040013 negative regulation of locomotion IEP Predict GO terms from Neighborhoods
BP GO:0042246 tissue regeneration IEP Predict GO terms from Neighborhoods
CC GO:0042555 MCM complex IEP Predict GO terms from Neighborhoods
MF GO:0042834 peptidoglycan binding IEP Predict GO terms from Neighborhoods
MF GO:0043138 3'-5' DNA helicase activity IEP Predict GO terms from Neighborhoods
BP GO:0043170 macromolecule metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0043280 positive regulation of cysteine-type endopeptidase activity involved in apoptotic process IEP Predict GO terms from Neighborhoods
BP GO:0043281 regulation of cysteine-type endopeptidase activity involved in apoptotic process IEP Predict GO terms from Neighborhoods
BP GO:0043457 regulation of cellular respiration IEP Predict GO terms from Neighborhoods
MF GO:0043734 DNA-N1-methyladenine dioxygenase activity IEP Predict GO terms from Neighborhoods
BP GO:0044728 DNA methylation or demethylation IEP Predict GO terms from Neighborhoods
BP GO:0045324 late endosome to vacuole transport IEP Predict GO terms from Neighborhoods
BP GO:0045806 negative regulation of endocytosis IEP Predict GO terms from Neighborhoods
BP GO:0046031 ADP metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046075 dTTP metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046385 deoxyribose phosphate biosynthetic process IEP Predict GO terms from Neighborhoods
CC GO:0046658 anchored component of plasma membrane IEP Predict GO terms from Neighborhoods
BP GO:0048354 mucilage biosynthetic process involved in seed coat development IEP Predict GO terms from Neighborhoods
BP GO:0048578 positive regulation of long-day photoperiodism, flowering IEP Predict GO terms from Neighborhoods
BP GO:0048599 oocyte development IEP Predict GO terms from Neighborhoods
BP GO:0048873 homeostasis of number of cells within a tissue IEP Predict GO terms from Neighborhoods
MF GO:0051011 microtubule minus-end binding IEP Predict GO terms from Neighborhoods
BP GO:0051012 microtubule sliding IEP Predict GO terms from Neighborhoods
BP GO:0051290 protein heterotetramerization IEP Predict GO terms from Neighborhoods
BP GO:0051291 protein heterooligomerization IEP Predict GO terms from Neighborhoods
BP GO:0051647 nucleus localization IEP Predict GO terms from Neighborhoods
MF GO:0051747 cytosine C-5 DNA demethylase activity IEP Predict GO terms from Neighborhoods
CC GO:0055037 recycling endosome IEP Predict GO terms from Neighborhoods
BP GO:0060041 retina development in camera-type eye IEP Predict GO terms from Neighborhoods
BP GO:0061351 neural precursor cell proliferation IEP Predict GO terms from Neighborhoods
MF GO:0061731 ribonucleoside-diphosphate reductase activity IEP Predict GO terms from Neighborhoods
BP GO:0070304 positive regulation of stress-activated protein kinase signaling cascade IEP Predict GO terms from Neighborhoods
CC GO:0070652 HAUS complex IEP Predict GO terms from Neighborhoods
BP GO:0070989 oxidative demethylation IEP Predict GO terms from Neighborhoods
CC GO:0071162 CMG complex IEP Predict GO terms from Neighborhoods
BP GO:0071466 cellular response to xenobiotic stimulus IEP Predict GO terms from Neighborhoods
BP GO:0071616 acyl-CoA biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0071985 multivesicular body sorting pathway IEP Predict GO terms from Neighborhoods
BP GO:0072089 stem cell proliferation IEP Predict GO terms from Neighborhoods
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0080111 DNA demethylation IEP Predict GO terms from Neighborhoods
BP GO:0090407 organophosphate biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0097367 carbohydrate derivative binding IEP Predict GO terms from Neighborhoods
CC GO:0097373 MCM core complex IEP Predict GO terms from Neighborhoods
MF GO:0097718 disordered domain specific binding IEP Predict GO terms from Neighborhoods
CC GO:0098588 bounding membrane of organelle IEP Predict GO terms from Neighborhoods
CC GO:0099081 supramolecular polymer IEP Predict GO terms from Neighborhoods
CC GO:0099501 exocytic vesicle membrane IEP Predict GO terms from Neighborhoods
CC GO:0099512 supramolecular fiber IEP Predict GO terms from Neighborhoods
CC GO:0099513 polymeric cytoskeletal fiber IEP Predict GO terms from Neighborhoods
MF GO:0140097 catalytic activity, acting on DNA IEP Predict GO terms from Neighborhoods
BP GO:0140719 constitutive heterochromatin formation IEP Predict GO terms from Neighborhoods
BP GO:1901293 nucleoside phosphate biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1901998 toxin transport IEP Predict GO terms from Neighborhoods
BP GO:1902182 shoot apical meristem development IEP Predict GO terms from Neighborhoods
BP GO:1902292 cell cycle DNA replication initiation IEP Predict GO terms from Neighborhoods
BP GO:1902299 pre-replicative complex assembly involved in cell cycle DNA replication IEP Predict GO terms from Neighborhoods
BP GO:1902315 nuclear cell cycle DNA replication initiation IEP Predict GO terms from Neighborhoods
BP GO:1902882 regulation of response to oxidative stress IEP Predict GO terms from Neighborhoods
BP GO:1902883 negative regulation of response to oxidative stress IEP Predict GO terms from Neighborhoods
BP GO:1902975 mitotic DNA replication initiation IEP Predict GO terms from Neighborhoods
MF GO:1904931 MCM complex binding IEP Predict GO terms from Neighborhoods
MF GO:1990518 single-stranded 3'-5' DNA helicase activity IEP Predict GO terms from Neighborhoods
BP GO:2000146 negative regulation of cell motility IEP Predict GO terms from Neighborhoods
BP GO:2001056 positive regulation of cysteine-type endopeptidase activity IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR001680 WD40_repeat 210 248
No external refs found!