Description : root hair initiation protein root hairless 1 (RHL1)
Gene families : OG_02_0008521 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000010878 | |
| Cluster | HCCA Clusters (HRR 50 & PCC 0.5): Cluster_197 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003677 | DNA binding | IEA | AHRD |
| MF | GO:0005515 | protein binding | IEA | AHRD |
| CC | GO:0005730 | nucleolus | IEA | AHRD |
| BP | GO:0042023 | DNA endoreduplication | IEA | AHRD |
| BP | GO:0048766 | root hair initiation | IEA | AHRD |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000075 | cell cycle checkpoint signaling | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000154 | rRNA modification | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000245 | spliceosomal complex assembly | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000412 | histone peptidyl-prolyl isomerization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000413 | protein peptidyl-prolyl isomerization | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0000993 | RNA polymerase II complex binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0001825 | blastocyst formation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0002119 | nematode larval development | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0003723 | RNA binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0003916 | DNA topoisomerase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0003917 | DNA topoisomerase type I (single strand cut, ATP-independent) activity | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005654 | nucleoplasm | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005681 | spliceosomal complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005684 | U2-type spliceosomal complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005686 | U2 snRNP | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005689 | U12-type spliceosomal complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005801 | cis-Golgi network | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006265 | DNA topological change | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006310 | DNA recombination | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006354 | DNA-templated transcription elongation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006396 | RNA processing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006397 | mRNA processing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006886 | intracellular protein transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006891 | intra-Golgi vesicle-mediated transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0007088 | regulation of mitotic nuclear division | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0007093 | mitotic cell cycle checkpoint signaling | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0007094 | mitotic spindle assembly checkpoint signaling | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0007131 | reciprocal meiotic recombination | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0007638 | mechanosensory behavior | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0008023 | transcription elongation factor complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0008104 | protein localization | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008143 | poly(A) binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008169 | C-methyltransferase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0008380 | RNA splicing | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008649 | rRNA methyltransferase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0009383 | rRNA (cytosine-C5-)-methyltransferase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009933 | meristem structural organization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010338 | leaf formation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010358 | leaf shaping | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010639 | negative regulation of organelle organization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010948 | negative regulation of cell cycle process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010965 | regulation of mitotic sister chromatid separation | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016018 | cyclosporin A binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0016070 | RNA metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0016071 | mRNA metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0016073 | snRNA metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0016180 | snRNA processing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0016192 | vesicle-mediated transport | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016434 | rRNA (cytosine) methyltransferase activity | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0016593 | Cdc73/Paf1 complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0016604 | nuclear body | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0016605 | PML body | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0016607 | nuclear speck | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016853 | isomerase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0017069 | snRNA binding | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0017119 | Golgi transport complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0019083 | viral transcription | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0021537 | telencephalon development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0022618 | ribonucleoprotein complex assembly | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0030071 | regulation of mitotic metaphase/anaphase transition | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0030532 | small nuclear ribonucleoprotein complex | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0030619 | U1 snRNA binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0030620 | U2 snRNA binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031056 | regulation of histone modification | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031058 | positive regulation of histone modification | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031060 | regulation of histone methylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031062 | positive regulation of histone methylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031167 | rRNA methylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031577 | spindle checkpoint signaling | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032042 | mitochondrial DNA metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032527 | protein exit from endoplasmic reticulum | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0032991 | protein-containing complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0033044 | regulation of chromosome organization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0033045 | regulation of sister chromatid segregation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0033046 | negative regulation of sister chromatid segregation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0033047 | regulation of mitotic sister chromatid segregation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0033048 | negative regulation of mitotic sister chromatid segregation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0033182 | regulation of histone ubiquitination | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0033365 | protein localization to organelle | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0034470 | ncRNA processing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0034472 | snRNA 3'-end processing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0034501 | protein localization to kinetochore | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0034660 | ncRNA metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0035825 | homologous recombination | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0043175 | RNA polymerase core enzyme binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043484 | regulation of RNA splicing | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0045171 | intercellular bridge | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045786 | negative regulation of cell cycle | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045839 | negative regulation of mitotic nuclear division | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045841 | negative regulation of mitotic metaphase/anaphase transition | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045930 | negative regulation of mitotic cell cycle | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0046907 | intracellular transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048193 | Golgi vesicle transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048440 | carpel development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048449 | floral organ formation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048453 | sepal formation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048644 | muscle organ morphogenesis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051129 | negative regulation of cellular component organization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051247 | positive regulation of protein metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051304 | chromosome separation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051641 | cellular localization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051649 | establishment of localization in cell | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051783 | regulation of nuclear division | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051784 | negative regulation of nuclear division | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051963 | regulation of synapse assembly | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051965 | positive regulation of synapse assembly | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051983 | regulation of chromosome segregation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051985 | negative regulation of chromosome segregation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0061085 | regulation of histone H3-K27 methylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0061087 | positive regulation of histone H3-K27 methylation | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0061632 | RNA lariat debranching enzyme activator activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0070475 | rRNA base methylation | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0071004 | U2-type prespliceosome | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0071005 | U2-type precatalytic spliceosome | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0071010 | prespliceosome | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0071011 | precatalytic spliceosome | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0071013 | catalytic step 2 spliceosome | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0071014 | post-mRNA release spliceosomal complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071173 | spindle assembly checkpoint signaling | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071174 | mitotic spindle checkpoint signaling | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071459 | protein localization to chromosome, centromeric region | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071826 | ribonucleoprotein complex subunit organization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0090057 | root radial pattern formation | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0097431 | mitotic spindle pole | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0097525 | spliceosomal snRNP complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0120114 | Sm-like protein family complex | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0140102 | catalytic activity, acting on a rRNA | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0140527 | reciprocal homologous recombination | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1901888 | regulation of cell junction assembly | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1901890 | positive regulation of cell junction assembly | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1901987 | regulation of cell cycle phase transition | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1901988 | negative regulation of cell cycle phase transition | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1901990 | regulation of mitotic cell cycle phase transition | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1901991 | negative regulation of mitotic cell cycle phase transition | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1902099 | regulation of metaphase/anaphase transition of cell cycle | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1902100 | negative regulation of metaphase/anaphase transition of cell cycle | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1903047 | mitotic cell cycle process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1903083 | protein localization to condensed chromosome | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1905818 | regulation of chromosome separation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1905819 | negative regulation of chromosome separation | IEP | Predict GO terms from Neighborhoods |
| CC | GO:1990423 | RZZ complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:1990904 | ribonucleoprotein complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2000816 | negative regulation of mitotic sister chromatid separation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2001166 | regulation of histone H2B ubiquitination | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2001251 | negative regulation of chromosome organization | IEP | Predict GO terms from Neighborhoods |
No InterPro domains available for this sequence
| No external refs found! |