Coexpression cluster: Cluster_29 (HCCA Clusters (HRR 50 & PCC 0.5))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0010202 response to low fluence red light stimulus 26.45% (32/121) 7.05 0.0 0.0
GO:2000012 regulation of auxin polar transport 32.23% (39/121) 6.02 0.0 0.0
GO:0009645 response to low light intensity stimulus 26.45% (32/121) 6.36 0.0 0.0
GO:0009641 shade avoidance 26.45% (32/121) 6.0 0.0 0.0
GO:0046621 negative regulation of organ growth 21.49% (26/121) 6.89 0.0 0.0
GO:0042255 ribosome assembly 19.83% (24/121) 6.77 0.0 0.0
GO:0010114 response to red light 28.1% (34/121) 5.08 0.0 0.0
GO:0080086 stamen filament development 20.66% (25/121) 6.41 0.0 0.0
GO:0046620 regulation of organ growth 21.49% (26/121) 6.09 0.0 0.0
GO:0009639 response to red or far red light 33.06% (40/121) 4.23 0.0 0.0
GO:0048640 negative regulation of developmental growth 21.49% (26/121) 5.83 0.0 0.0
GO:0009741 response to brassinosteroid 27.27% (33/121) 4.71 0.0 0.0
GO:0051510 regulation of unidimensional cell growth 27.27% (33/121) 4.7 0.0 0.0
GO:0051093 negative regulation of developmental process 36.36% (44/121) 3.62 0.0 0.0
GO:0009642 response to light intensity 30.58% (37/121) 4.16 0.0 0.0
GO:0010817 regulation of hormone levels 38.84% (47/121) 3.37 0.0 0.0
GO:0009416 response to light stimulus 47.93% (58/121) 2.68 0.0 0.0
GO:0048638 regulation of developmental growth 34.71% (42/121) 3.5 0.0 0.0
GO:0022604 regulation of cell morphogenesis 27.27% (33/121) 4.24 0.0 0.0
GO:0009314 response to radiation 47.93% (58/121) 2.62 0.0 0.0
GO:0051241 negative regulation of multicellular organismal process 32.23% (39/121) 3.64 0.0 0.0
GO:0051239 regulation of multicellular organismal process 47.93% (58/121) 2.58 0.0 0.0
GO:0040008 regulation of growth 38.84% (47/121) 3.05 0.0 0.0
GO:0001558 regulation of cell growth 28.93% (35/121) 3.78 0.0 0.0
GO:0014070 response to organic cyclic compound 38.84% (47/121) 2.92 0.0 0.0
GO:0022603 regulation of anatomical structure morphogenesis 31.4% (38/121) 3.45 0.0 0.0
GO:0050793 regulation of developmental process 52.07% (63/121) 2.24 0.0 0.0
GO:0045926 negative regulation of growth 22.31% (27/121) 4.41 0.0 0.0
GO:0051049 regulation of transport 33.88% (41/121) 3.13 0.0 0.0
GO:0140694 non-membrane-bounded organelle assembly 20.66% (25/121) 4.54 0.0 0.0
GO:0009725 response to hormone 50.41% (61/121) 2.17 0.0 0.0
GO:0090406 pollen tube 20.66% (25/121) 4.43 0.0 0.0
GO:0033993 response to lipid 44.63% (54/121) 2.34 0.0 0.0
GO:0009719 response to endogenous stimulus 50.41% (61/121) 2.07 0.0 0.0
GO:0009628 response to abiotic stimulus 61.16% (74/121) 1.67 0.0 0.0
GO:0032879 regulation of localization 33.88% (41/121) 2.82 0.0 0.0
GO:0070925 organelle assembly 21.49% (26/121) 3.97 0.0 0.0
GO:0010033 response to organic substance 55.37% (67/121) 1.61 0.0 0.0
GO:0048856 anatomical structure development 57.02% (69/121) 1.52 0.0 0.0
GO:0048580 regulation of post-embryonic development 28.1% (34/121) 2.69 0.0 0.0
GO:0050896 response to stimulus 77.69% (94/121) 1.0 0.0 0.0
GO:0019897 extrinsic component of plasma membrane 11.57% (14/121) 5.15 0.0 0.0
GO:0009733 response to auxin 22.31% (27/121) 3.09 0.0 0.0
GO:0051128 regulation of cellular component organization 30.58% (37/121) 2.4 0.0 0.0
GO:1901700 response to oxygen-containing compound 49.59% (60/121) 1.6 0.0 0.0
GO:0003006 developmental process involved in reproduction 46.28% (56/121) 1.7 0.0 0.0
GO:0022414 reproductive process 51.24% (62/121) 1.54 0.0 0.0
GO:0032502 developmental process 63.64% (77/121) 1.24 0.0 0.0
GO:0065008 regulation of biological quality 41.32% (50/121) 1.84 0.0 0.0
GO:2000026 regulation of multicellular organismal development 28.93% (35/121) 2.39 0.0 0.0
GO:0048519 negative regulation of biological process 46.28% (56/121) 1.59 0.0 0.0
GO:0005730 nucleolus 23.14% (28/121) 2.73 0.0 0.0
GO:0019898 extrinsic component of membrane 13.22% (16/121) 4.12 0.0 0.0
GO:0120025 plasma membrane bounded cell projection 21.49% (26/121) 2.78 0.0 0.0
GO:1900140 regulation of seedling development 15.7% (19/121) 3.49 0.0 0.0
GO:0043229 intracellular organelle 74.38% (90/121) 0.9 0.0 0.0
GO:0042221 response to chemical 57.02% (69/121) 1.22 0.0 0.0
GO:0043226 organelle 74.38% (90/121) 0.89 0.0 0.0
GO:0030307 positive regulation of cell growth 11.57% (14/121) 4.21 0.0 0.0
GO:0042995 cell projection 21.49% (26/121) 2.65 0.0 0.0
GO:0005515 protein binding 71.07% (86/121) 0.91 0.0 0.0
GO:0009646 response to absence of light 12.4% (15/121) 3.85 0.0 0.0
GO:0005737 cytoplasm 33.06% (40/121) 1.82 0.0 0.0
GO:0009987 cellular process 82.64% (100/121) 0.66 0.0 0.0
GO:0022607 cellular component assembly 26.45% (32/121) 2.06 0.0 0.0
GO:1901568 fatty acid derivative metabolic process 9.92% (12/121) 4.19 0.0 0.0
GO:0050789 regulation of biological process 64.46% (78/121) 0.94 0.0 0.0
GO:0009734 auxin-activated signaling pathway 12.4% (15/121) 3.54 0.0 0.0
GO:0010029 regulation of seed germination 13.22% (16/121) 3.37 0.0 0.0
GO:0005488 binding 80.17% (97/121) 0.68 0.0 0.0
GO:0110165 cellular anatomical entity 87.6% (106/121) 0.54 0.0 0.0
GO:0050794 regulation of cellular process 57.85% (70/121) 0.99 0.0 0.0
GO:0065007 biological regulation 66.12% (80/121) 0.85 0.0 0.0
GO:0045927 positive regulation of growth 11.57% (14/121) 3.4 0.0 0.0
GO:0005575 cellular_component 87.6% (106/121) 0.52 0.0 0.0
GO:0006723 cuticle hydrocarbon biosynthetic process 7.44% (9/121) 4.61 0.0 0.0
GO:2000033 regulation of seed dormancy process 6.61% (8/121) 5.0 0.0 0.0
GO:1901570 fatty acid derivative biosynthetic process 7.44% (9/121) 4.37 0.0 0.0
GO:0008150 biological_process 86.78% (105/121) 0.5 0.0 0.0
GO:0016043 cellular component organization 39.67% (48/121) 1.28 0.0 0.0
GO:0043228 non-membrane-bounded organelle 28.1% (34/121) 1.67 0.0 0.0
GO:0043232 intracellular non-membrane-bounded organelle 28.1% (34/121) 1.67 0.0 0.0
GO:2000034 regulation of seed maturation 6.61% (8/121) 4.62 0.0 0.0
GO:0003674 molecular_function 84.3% (102/121) 0.5 0.0 0.0
GO:0010025 wax biosynthetic process 6.61% (8/121) 4.4 0.0 0.0
GO:0071840 cellular component organization or biogenesis 39.67% (48/121) 1.19 0.0 0.0
GO:0042761 very long-chain fatty acid biosynthetic process 5.79% (7/121) 4.75 0.0 0.0
GO:0010166 wax metabolic process 6.61% (8/121) 4.28 0.0 0.0
GO:0006996 organelle organization 24.79% (30/121) 1.67 0.0 0.0
GO:0043478 pigment accumulation in response to UV light 4.96% (6/121) 5.06 0.0 1e-06
GO:0043479 pigment accumulation in tissues in response to UV light 4.96% (6/121) 5.06 0.0 1e-06
GO:0043480 pigment accumulation in tissues 4.96% (6/121) 5.06 0.0 1e-06
GO:0043481 anthocyanin accumulation in tissues in response to UV light 4.96% (6/121) 5.06 0.0 1e-06
GO:0080050 regulation of seed development 6.61% (8/121) 4.06 0.0 1e-06
GO:0043476 pigment accumulation 4.96% (6/121) 5.01 0.0 1e-06
GO:0010091 trichome branching 7.44% (9/121) 3.7 0.0 1e-06
GO:0048581 negative regulation of post-embryonic development 10.74% (13/121) 2.82 0.0 1e-06
GO:0000038 very long-chain fatty acid metabolic process 5.79% (7/121) 4.42 0.0 1e-06
GO:1900057 positive regulation of leaf senescence 6.61% (8/121) 3.94 0.0 1e-06
GO:0003700 DNA-binding transcription factor activity 17.36% (21/121) 1.96 0.0 2e-06
GO:0099402 plant organ development 19.01% (23/121) 1.83 0.0 2e-06
GO:0009755 hormone-mediated signaling pathway 17.36% (21/121) 1.94 0.0 2e-06
GO:0009828 plant-type cell wall loosening 4.96% (6/121) 4.69 0.0 2e-06
GO:2000038 regulation of stomatal complex development 5.79% (7/121) 4.07 0.0 4e-06
GO:0010345 suberin biosynthetic process 6.61% (8/121) 3.65 0.0 5e-06
GO:0048497 maintenance of floral organ identity 4.13% (5/121) 5.17 0.0 5e-06
GO:0090700 maintenance of plant organ identity 4.13% (5/121) 5.17 0.0 5e-06
GO:0009590 detection of gravity 3.31% (4/121) 5.81 1e-06 1.2e-05
GO:0080051 cutin transport 3.31% (4/121) 5.81 1e-06 1.2e-05
GO:1990837 sequence-specific double-stranded DNA binding 17.36% (21/121) 1.78 1e-06 1.2e-05
GO:0009827 plant-type cell wall modification 7.44% (9/121) 3.18 1e-06 1.3e-05
GO:0006631 fatty acid metabolic process 10.74% (13/121) 2.39 1e-06 2.1e-05
GO:0000976 transcription cis-regulatory region binding 16.53% (20/121) 1.74 2e-06 3.3e-05
GO:0140110 transcription regulator activity 17.36% (21/121) 1.68 2e-06 3.4e-05
GO:0001067 transcription regulatory region nucleic acid binding 16.53% (20/121) 1.73 2e-06 3.5e-05
GO:0006109 regulation of carbohydrate metabolic process 9.09% (11/121) 2.59 2e-06 3.9e-05
GO:0003690 double-stranded DNA binding 17.36% (21/121) 1.66 3e-06 4.1e-05
GO:0016020 membrane 47.93% (58/121) 0.77 3e-06 4.9e-05
GO:0043473 pigmentation 4.96% (6/121) 3.91 3e-06 4.9e-05
GO:0045604 regulation of epidermal cell differentiation 3.31% (4/121) 5.29 3e-06 5.1e-05
GO:0008610 lipid biosynthetic process 15.7% (19/121) 1.75 4e-06 5.3e-05
GO:0045682 regulation of epidermis development 3.31% (4/121) 5.25 4e-06 5.6e-05
GO:0090698 post-embryonic plant morphogenesis 9.09% (11/121) 2.52 4e-06 5.7e-05
GO:1900055 regulation of leaf senescence 6.61% (8/121) 3.14 4e-06 5.7e-05
GO:0010601 positive regulation of auxin biosynthetic process 3.31% (4/121) 5.21 4e-06 6.2e-05
GO:0120251 hydrocarbon biosynthetic process 9.09% (11/121) 2.46 6e-06 8.1e-05
GO:0030856 regulation of epithelial cell differentiation 3.31% (4/121) 5.09 6e-06 8.5e-05
GO:0009653 anatomical structure morphogenesis 22.31% (27/121) 1.33 7e-06 9.3e-05
GO:0003002 regionalization 10.74% (13/121) 2.17 7e-06 9.9e-05
GO:0120252 hydrocarbon metabolic process 9.09% (11/121) 2.37 1e-05 0.00014
GO:0010031 circumnutation 3.31% (4/121) 4.88 1.1e-05 0.000147
GO:0043565 sequence-specific DNA binding 17.36% (21/121) 1.53 1.1e-05 0.000148
GO:0030855 epithelial cell differentiation 4.96% (6/121) 3.61 1.1e-05 0.000148
GO:0048764 trichoblast maturation 4.13% (5/121) 4.1 1.2e-05 0.000154
GO:0048765 root hair cell differentiation 4.13% (5/121) 4.1 1.2e-05 0.000154
GO:0042335 cuticle development 4.13% (5/121) 4.1 1.2e-05 0.000154
GO:0044255 cellular lipid metabolic process 17.36% (21/121) 1.5 1.5e-05 0.000199
GO:0010143 cutin biosynthetic process 3.31% (4/121) 4.75 1.5e-05 0.000202
GO:0009913 epidermal cell differentiation 4.13% (5/121) 4.0 1.6e-05 0.000212
GO:0042545 cell wall modification 8.26% (10/121) 2.45 1.6e-05 0.000213
GO:0043171 peptide catabolic process 3.31% (4/121) 4.72 1.7e-05 0.000214
GO:0009959 negative gravitropism 3.31% (4/121) 4.69 1.8e-05 0.000231
GO:0071695 anatomical structure maturation 7.44% (9/121) 2.61 1.8e-05 0.000231
GO:0008544 epidermis development 2.48% (3/121) 5.83 1.9e-05 0.000241
GO:0005773 vacuole 14.05% (17/121) 1.68 2.1e-05 0.000266
GO:0007422 peripheral nervous system development 2.48% (3/121) 5.75 2.3e-05 0.000284
GO:0009664 plant-type cell wall organization 7.44% (9/121) 2.55 2.6e-05 0.000316
GO:0045595 regulation of cell differentiation 9.92% (12/121) 2.08 2.9e-05 0.000344
GO:0046458 hexadecanal metabolic process 1.65% (2/121) 7.75 2.8e-05 0.000345
GO:0050061 long-chain-aldehyde dehydrogenase activity 1.65% (2/121) 7.75 2.8e-05 0.000345
GO:0052814 medium-chain-aldehyde dehydrogenase activity 1.65% (2/121) 7.75 2.8e-05 0.000345
GO:0032881 regulation of polysaccharide metabolic process 5.79% (7/121) 3.01 2.9e-05 0.000346
GO:0009965 leaf morphogenesis 5.79% (7/121) 3.0 3e-05 0.00036
GO:0006629 lipid metabolic process 19.01% (23/121) 1.34 3.2e-05 0.000379
GO:0090355 positive regulation of auxin metabolic process 3.31% (4/121) 4.48 3.3e-05 0.000382
GO:1904278 positive regulation of wax biosynthetic process 2.48% (3/121) 5.53 3.7e-05 0.000431
GO:2000122 negative regulation of stomatal complex development 3.31% (4/121) 4.43 3.7e-05 0.000432
GO:0007165 signal transduction 23.14% (28/121) 1.15 4e-05 0.000462
GO:0048469 cell maturation 4.13% (5/121) 3.73 4.1e-05 0.000465
GO:0050879 multicellular organismal movement 3.31% (4/121) 4.36 4.5e-05 0.000511
GO:0009605 response to external stimulus 35.54% (43/121) 0.83 4.5e-05 0.000511
GO:0009939 positive regulation of gibberellic acid mediated signaling pathway 3.31% (4/121) 4.34 4.8e-05 0.00054
GO:0007389 pattern specification process 11.57% (14/121) 1.8 5e-05 0.000558
GO:0005634 nucleus 28.1% (34/121) 0.98 5.6e-05 0.000617
GO:0010099 regulation of photomorphogenesis 4.13% (5/121) 3.62 5.7e-05 0.000629
GO:0046886 positive regulation of hormone biosynthetic process 3.31% (4/121) 4.27 5.8e-05 0.000631
GO:0009411 response to UV 8.26% (10/121) 2.23 5.9e-05 0.000647
GO:0048575 short-day photoperiodism, flowering 3.31% (4/121) 4.23 6.5e-05 0.0007
GO:0048572 short-day photoperiodism 3.31% (4/121) 4.21 6.8e-05 0.000736
GO:0035017 cuticle pattern formation 3.31% (4/121) 4.13 8.5e-05 0.00091
GO:0140359 ABC-type transporter activity 4.13% (5/121) 3.46 9.8e-05 0.001034
GO:0021700 developmental maturation 7.44% (9/121) 2.3 9.8e-05 0.001036
GO:0045229 external encapsulating structure organization 11.57% (14/121) 1.71 9.7e-05 0.001036
GO:0048574 long-day photoperiodism, flowering 3.31% (4/121) 4.07 9.9e-05 0.001038
GO:0009630 gravitropism 5.79% (7/121) 2.72 0.000101 0.001045
GO:0006633 fatty acid biosynthetic process 5.79% (7/121) 2.72 0.000101 0.001045
GO:0010600 regulation of auxin biosynthetic process 3.31% (4/121) 4.03 0.00011 0.001127
GO:1904276 regulation of wax biosynthetic process 2.48% (3/121) 4.97 0.000122 0.001248
GO:2000023 regulation of lateral root development 4.13% (5/121) 3.37 0.00013 0.001321
GO:0080091 regulation of raffinose metabolic process 3.31% (4/121) 3.96 0.000133 0.001343
GO:0015562 efflux transmembrane transporter activity 4.13% (5/121) 3.36 0.000134 0.001346
GO:0033306 phytol metabolic process 1.65% (2/121) 6.75 0.000141 0.001413
GO:0048509 regulation of meristem development 5.79% (7/121) 2.64 0.000143 0.001426
GO:0048522 positive regulation of cellular process 26.45% (32/121) 0.93 0.000179 0.001771
GO:0032352 positive regulation of hormone metabolic process 3.31% (4/121) 3.84 0.000182 0.001777
GO:1901957 regulation of cutin biosynthetic process 3.31% (4/121) 3.84 0.000182 0.001777
GO:0048444 floral organ morphogenesis 3.31% (4/121) 3.83 0.00019 0.001845
GO:0015692 lead ion transport 2.48% (3/121) 4.75 0.000192 0.001855
GO:0048366 leaf development 6.61% (8/121) 2.34 0.000195 0.001875
GO:0042626 ATPase-coupled transmembrane transporter activity 4.96% (6/121) 2.84 0.000203 0.001947
GO:2000904 regulation of starch metabolic process 3.31% (4/121) 3.78 0.000215 0.002046
GO:0045596 negative regulation of cell differentiation 4.96% (6/121) 2.81 0.000229 0.002168
GO:0048518 positive regulation of biological process 30.58% (37/121) 0.82 0.000231 0.002174
GO:0009606 tropism 5.79% (7/121) 2.52 0.000236 0.002216
GO:0032501 multicellular organismal process 31.4% (38/121) 0.8 0.000248 0.002297
GO:0080167 response to karrikin 7.44% (9/121) 2.12 0.000246 0.002298
GO:0048571 long-day photoperiodism 3.31% (4/121) 3.72 0.000252 0.002328
GO:0046577 long-chain-alcohol oxidase activity 1.65% (2/121) 6.34 0.000263 0.002415
GO:0009629 response to gravity 5.79% (7/121) 2.49 0.000267 0.00244
GO:0008356 asymmetric cell division 3.31% (4/121) 3.69 0.000272 0.002477
GO:1901332 negative regulation of lateral root development 3.31% (4/121) 3.68 0.000283 0.00256
GO:0048506 regulation of timing of meristematic phase transition 4.96% (6/121) 2.75 0.000287 0.002575
GO:0048510 regulation of timing of transition from vegetative to reproductive phase 4.96% (6/121) 2.75 0.000287 0.002575
GO:0009914 hormone transport 5.79% (7/121) 2.46 0.000305 0.00272
GO:0010118 stomatal movement 4.96% (6/121) 2.72 0.000321 0.002845
GO:0019747 regulation of isoprenoid metabolic process 4.13% (5/121) 3.08 0.000332 0.002934
GO:0004028 3-chloroallyl aldehyde dehydrogenase activity 1.65% (2/121) 6.17 0.000337 0.002964
GO:2000032 regulation of secondary shoot formation 3.31% (4/121) 3.61 0.00034 0.002975
GO:0090627 plant epidermal cell differentiation 4.96% (6/121) 2.7 0.000351 0.003023
GO:0097264 self proteolysis 2.48% (3/121) 4.46 0.000349 0.003025
GO:2000069 regulation of post-embryonic root development 4.13% (5/121) 3.07 0.000348 0.003033
GO:0042908 xenobiotic transport 4.13% (5/121) 3.06 0.000357 0.003062
GO:0010100 negative regulation of photomorphogenesis 2.48% (3/121) 4.43 0.000373 0.003189
GO:0010336 gibberellic acid homeostasis 3.31% (4/121) 3.57 0.000378 0.003215
GO:0000902 cell morphogenesis 11.57% (14/121) 1.52 0.00039 0.003296
GO:0034504 protein localization to nucleus 4.13% (5/121) 3.01 0.00042 0.003533
GO:0010053 root epidermal cell differentiation 4.13% (5/121) 2.99 0.000439 0.003679
GO:0060688 regulation of morphogenesis of a branching structure 3.31% (4/121) 3.5 0.000448 0.003741
GO:0009611 response to wounding 10.74% (13/121) 1.56 0.00048 0.003988
GO:0040034 regulation of development, heterochronic 4.96% (6/121) 2.6 0.000494 0.004081
GO:0033721 aldehyde dehydrogenase (NADP+) activity 1.65% (2/121) 5.88 0.000513 0.004205
GO:0034454 microtubule anchoring at centrosome 1.65% (2/121) 5.88 0.000513 0.004205
GO:0000904 cell morphogenesis involved in differentiation 9.09% (11/121) 1.72 0.000527 0.0043
GO:0048827 phyllome development 7.44% (9/121) 1.97 0.000531 0.004316
GO:0010431 seed maturation 3.31% (4/121) 3.38 0.000615 0.00491
GO:0090354 regulation of auxin metabolic process 3.31% (4/121) 3.38 0.000615 0.00491
GO:0052642 lysophosphatidic acid phosphatase activity 1.65% (2/121) 5.75 0.000615 0.004947
GO:0080172 petal epidermis patterning 1.65% (2/121) 5.75 0.000615 0.004947
GO:0009698 phenylpropanoid metabolic process 9.09% (11/121) 1.68 0.000676 0.00537
GO:0010051 xylem and phloem pattern formation 5.79% (7/121) 2.25 0.000711 0.00562
GO:0034453 microtubule anchoring 1.65% (2/121) 5.64 0.000725 0.005684
GO:0072393 microtubule anchoring at microtubule organizing center 1.65% (2/121) 5.64 0.000725 0.005684
GO:0046885 regulation of hormone biosynthetic process 3.31% (4/121) 3.31 0.000735 0.005735
GO:0009699 phenylpropanoid biosynthetic process 8.26% (10/121) 1.76 0.000784 0.006096
GO:0009924 octadecanal decarbonylase activity 1.65% (2/121) 5.53 0.000844 0.006424
GO:0043447 alkane biosynthetic process 1.65% (2/121) 5.53 0.000844 0.006424
GO:0071771 aldehyde decarbonylase activity 1.65% (2/121) 5.53 0.000844 0.006424
GO:1990465 aldehyde oxygenase (deformylating) activity 1.65% (2/121) 5.53 0.000844 0.006424
GO:0097305 response to alcohol 12.4% (15/121) 1.34 0.000834 0.006452
GO:0043227 membrane-bounded organelle 49.59% (60/121) 0.49 0.000858 0.0065
GO:0004629 phospholipase C activity 1.65% (2/121) 5.43 0.000972 0.007157
GO:0018479 benzaldehyde dehydrogenase (NAD+) activity 1.65% (2/121) 5.43 0.000972 0.007157
GO:0019115 benzaldehyde dehydrogenase [NAD(P)+] activity 1.65% (2/121) 5.43 0.000972 0.007157
GO:0000254 C-4 methylsterol oxidase activity 1.65% (2/121) 5.43 0.000972 0.007157
GO:0016716 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, another compound as one donor, and incorporation of one atom of oxygen 1.65% (2/121) 5.43 0.000972 0.007157
GO:0043446 cellular alkane metabolic process 1.65% (2/121) 5.43 0.000972 0.007157
GO:0015399 primary active transmembrane transporter activity 4.96% (6/121) 2.42 0.000952 0.007186
GO:0071669 plant-type cell wall organization or biogenesis 7.44% (9/121) 1.84 0.000985 0.007223
GO:0046890 regulation of lipid biosynthetic process 5.79% (7/121) 2.16 0.001027 0.007469
GO:0048364 root development 9.09% (11/121) 1.61 0.001023 0.007471
GO:0032787 monocarboxylic acid metabolic process 10.74% (13/121) 1.44 0.00106 0.007684
GO:0048825 cotyledon development 4.13% (5/121) 2.7 0.00108 0.007793
GO:1905392 plant organ morphogenesis 7.44% (9/121) 1.82 0.00109 0.00784
GO:0043231 intracellular membrane-bounded organelle 48.76% (59/121) 0.48 0.001168 0.008363
GO:2000241 regulation of reproductive process 11.57% (14/121) 1.35 0.001188 0.008438
GO:0003677 DNA binding 17.36% (21/121) 1.04 0.001187 0.008466
GO:2000030 regulation of response to red or far red light 4.13% (5/121) 2.65 0.001286 0.0091
GO:1905428 regulation of plant organ formation 3.31% (4/121) 3.09 0.001312 0.009251
GO:0080168 abscisic acid transport 2.48% (3/121) 3.79 0.001362 0.009563
GO:0046889 positive regulation of lipid biosynthetic process 4.13% (5/121) 2.62 0.001376 0.009626
GO:0006690 icosanoid metabolic process 4.13% (5/121) 2.62 0.001399 0.009751
GO:0043668 exine 1.65% (2/121) 5.17 0.001408 0.009773
GO:0006869 lipid transport 4.96% (6/121) 2.31 0.001429 0.009885
GO:0009640 photomorphogenesis 3.31% (4/121) 3.05 0.001444 0.009909
GO:0140657 ATP-dependent activity 7.44% (9/121) 1.76 0.001441 0.009926
GO:0042406 extrinsic component of endoplasmic reticulum membrane 1.65% (2/121) 5.09 0.00157 0.010737
GO:0051302 regulation of cell division 4.96% (6/121) 2.27 0.001644 0.011197
GO:2000280 regulation of root development 4.96% (6/121) 2.24 0.001814 0.012313
GO:0071555 cell wall organization 8.26% (10/121) 1.58 0.002027 0.013708
GO:0009581 detection of external stimulus 3.31% (4/121) 2.91 0.002062 0.013838
GO:0009582 detection of abiotic stimulus 3.31% (4/121) 2.91 0.002062 0.013838
GO:0045834 positive regulation of lipid metabolic process 4.13% (5/121) 2.49 0.00208 0.013908
GO:0000132 establishment of mitotic spindle orientation 1.65% (2/121) 4.88 0.002108 0.013995
GO:0044458 motile cilium assembly 1.65% (2/121) 4.88 0.002108 0.013995
GO:1902066 regulation of cell wall pectin metabolic process 2.48% (3/121) 3.56 0.002144 0.014184
GO:0010243 response to organonitrogen compound 10.74% (13/121) 1.31 0.002278 0.015012
GO:0048646 anatomical structure formation involved in morphogenesis 9.92% (12/121) 1.38 0.002305 0.015135
GO:0009737 response to abscisic acid 10.74% (13/121) 1.31 0.002325 0.015212
GO:0015245 fatty acid transmembrane transporter activity 1.65% (2/121) 4.75 0.002509 0.016356
GO:0032350 regulation of hormone metabolic process 3.31% (4/121) 2.83 0.002529 0.01643
GO:0009608 response to symbiont 4.13% (5/121) 2.41 0.002589 0.0167
GO:0048731 system development 8.26% (10/121) 1.53 0.002583 0.016718
GO:0090332 stomatal closure 2.48% (3/121) 3.44 0.002707 0.017399
GO:0009825 multidimensional cell growth 3.31% (4/121) 2.8 0.002735 0.017516
GO:1903173 fatty alcohol metabolic process 1.65% (2/121) 4.64 0.002942 0.018778
GO:0006805 xenobiotic metabolic process 2.48% (3/121) 3.4 0.002973 0.01891
GO:0002951 leukotriene-C(4) hydrolase 0.83% (1/121) 8.34 0.003096 0.019484
GO:1901748 leukotriene D4 metabolic process 0.83% (1/121) 8.34 0.003096 0.019484
GO:1901750 leukotriene D4 biosynthetic process 0.83% (1/121) 8.34 0.003096 0.019484
GO:0046864 isoprenoid transport 2.48% (3/121) 3.37 0.003159 0.019749
GO:0046865 terpenoid transport 2.48% (3/121) 3.37 0.003159 0.019749
GO:0050826 response to freezing 3.31% (4/121) 2.73 0.003239 0.020179
GO:0004029 aldehyde dehydrogenase (NAD+) activity 1.65% (2/121) 4.53 0.003408 0.021158
GO:0036293 response to decreased oxygen levels 5.79% (7/121) 1.85 0.003461 0.021415
GO:0010154 fruit development 2.48% (3/121) 3.31 0.003553 0.021908
GO:0016021 integral component of membrane 15.7% (19/121) 0.97 0.003569 0.021931
GO:2000068 regulation of defense response to insect 3.31% (4/121) 2.68 0.003609 0.022102
GO:0046292 formaldehyde metabolic process 1.65% (2/121) 4.48 0.003653 0.022299
GO:0010193 response to ozone 3.31% (4/121) 2.67 0.003738 0.02274
GO:0010115 regulation of abscisic acid biosynthetic process 2.48% (3/121) 3.28 0.00376 0.022801
GO:0009937 regulation of gibberellic acid mediated signaling pathway 3.31% (4/121) 2.66 0.00387 0.023389
GO:0040001 establishment of mitotic spindle localization 1.65% (2/121) 4.43 0.003906 0.02345
GO:0051294 establishment of spindle orientation 1.65% (2/121) 4.43 0.003906 0.02345
GO:0010075 regulation of meristem growth 4.13% (5/121) 2.27 0.00392 0.023453
GO:1900367 positive regulation of defense response to insect 2.48% (3/121) 3.25 0.003975 0.023708
GO:0051094 positive regulation of developmental process 9.09% (11/121) 1.35 0.003993 0.023738
GO:0030667 secretory granule membrane 2.48% (3/121) 3.23 0.004085 0.024206
GO:0007476 imaginal disc-derived wing morphogenesis 1.65% (2/121) 4.38 0.004167 0.024611
GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor 1.65% (2/121) 4.34 0.004436 0.025862
GO:0035114 imaginal disc-derived appendage morphogenesis 1.65% (2/121) 4.34 0.004436 0.025862
GO:0080148 negative regulation of response to water deprivation 2.48% (3/121) 3.19 0.004427 0.025975
GO:0019216 regulation of lipid metabolic process 5.79% (7/121) 1.79 0.004423 0.026034
GO:0009637 response to blue light 4.13% (5/121) 2.23 0.004492 0.026104
GO:0006714 sesquiterpenoid metabolic process 2.48% (3/121) 3.18 0.004544 0.026325
GO:0051606 detection of stimulus 4.96% (6/121) 1.96 0.004611 0.026626
GO:0070482 response to oxygen levels 5.79% (7/121) 1.77 0.004644 0.026735
GO:0044550 secondary metabolite biosynthetic process 9.09% (11/121) 1.32 0.004703 0.026986
GO:0010597 green leaf volatile biosynthetic process 3.31% (4/121) 2.56 0.004887 0.027864
GO:0009926 auxin polar transport 3.31% (4/121) 2.56 0.004887 0.027864
GO:0035120 post-embryonic appendage morphogenesis 1.65% (2/121) 4.25 0.004997 0.028406
GO:0009962 regulation of flavonoid biosynthetic process 3.31% (4/121) 2.55 0.005045 0.0285
GO:0019372 lipoxygenase pathway 3.31% (4/121) 2.55 0.005045 0.0285
GO:0004030 aldehyde dehydrogenase [NAD(P)+] activity 1.65% (2/121) 4.21 0.005289 0.029787
GO:0015711 organic anion transport 4.96% (6/121) 1.91 0.005465 0.030682
GO:0005814 centriole 1.65% (2/121) 4.17 0.005589 0.031282
GO:0009269 response to desiccation 2.48% (3/121) 3.06 0.005687 0.031734
GO:0102419 sn-2-glycerol-3-phosphate omega-OH-C22:0-CoA acyl transferase activity 0.83% (1/121) 7.34 0.006182 0.032312
GO:0010457 centriole-centriole cohesion 0.83% (1/121) 7.34 0.006182 0.032312
GO:0010938 cytoplasmic microtubule depolymerization 0.83% (1/121) 7.34 0.006182 0.032312
GO:0021904 dorsal/ventral neural tube patterning 0.83% (1/121) 7.34 0.006182 0.032312
GO:0036334 epidermal stem cell homeostasis 0.83% (1/121) 7.34 0.006182 0.032312
GO:0060404 axonemal microtubule depolymerization 0.83% (1/121) 7.34 0.006182 0.032312
GO:0061523 cilium disassembly 0.83% (1/121) 7.34 0.006182 0.032312
GO:0070463 tubulin-dependent ATPase activity 0.83% (1/121) 7.34 0.006182 0.032312
GO:0140210 protein transport along microtubule to kinetochore 0.83% (1/121) 7.34 0.006182 0.032312
GO:1990295 post-anaphase microtubule array 0.83% (1/121) 7.34 0.006182 0.032312
GO:1990758 mitotic sister chromatid biorientation 0.83% (1/121) 7.34 0.006182 0.032312
GO:0000048 peptidyltransferase activity 0.83% (1/121) 7.34 0.006182 0.032312
GO:0019370 leukotriene biosynthetic process 0.83% (1/121) 7.34 0.006182 0.032312
GO:0031179 peptide modification 0.83% (1/121) 7.34 0.006182 0.032312
GO:0036374 glutathione hydrolase activity 0.83% (1/121) 7.34 0.006182 0.032312
GO:0061017 hepatoblast differentiation 0.83% (1/121) 7.34 0.006182 0.032312
GO:0022622 root system development 0.83% (1/121) 7.34 0.006182 0.032312
GO:0009507 chloroplast 9.92% (12/121) 1.2 0.006204 0.032338
GO:0048367 shoot system development 5.79% (7/121) 1.71 0.005838 0.032472
GO:0010222 stem vascular tissue pattern formation 1.65% (2/121) 4.13 0.005897 0.032503
GO:0018685 alkane 1-monooxygenase activity 1.65% (2/121) 4.13 0.005897 0.032503
GO:1901698 response to nitrogen compound 10.74% (13/121) 1.14 0.006269 0.032581
GO:0072330 monocarboxylic acid biosynthetic process 5.79% (7/121) 1.71 0.005882 0.032622
GO:0048609 multicellular organismal reproductive process 7.44% (9/121) 1.44 0.006126 0.033663
GO:0008081 phosphoric diester hydrolase activity 2.48% (3/121) 2.99 0.006537 0.033876
GO:0046467 membrane lipid biosynthetic process 2.48% (3/121) 2.98 0.006685 0.034547
GO:0007417 central nervous system development 1.65% (2/121) 4.01 0.006864 0.035173
GO:0051293 establishment of spindle localization 1.65% (2/121) 4.01 0.006864 0.035173
GO:0010496 intercellular transport 2.48% (3/121) 2.97 0.006836 0.035225
GO:0031224 intrinsic component of membrane 16.53% (20/121) 0.85 0.00704 0.035971
GO:0009409 response to cold 9.92% (12/121) 1.17 0.007067 0.036006
GO:1905393 plant organ formation 4.96% (6/121) 1.83 0.007138 0.03627
GO:1902930 regulation of alcohol biosynthetic process 2.48% (3/121) 2.93 0.007299 0.036985
GO:0016713 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced iron-sulfur protein as one donor, and incorporation of one atom of oxygen 1.65% (2/121) 3.91 0.007899 0.039912
GO:0048658 anther wall tapetum development 2.48% (3/121) 2.89 0.007946 0.040037
GO:0051653 spindle localization 1.65% (2/121) 3.88 0.008259 0.041498
GO:0046394 carboxylic acid biosynthetic process 7.44% (9/121) 1.36 0.008749 0.043843
GO:0031134 sister chromatid biorientation 0.83% (1/121) 6.75 0.009258 0.046013
GO:0045144 meiotic sister chromatid segregation 0.83% (1/121) 6.75 0.009258 0.046013
GO:0016756 glutathione gamma-glutamylcysteinyltransferase activity 0.83% (1/121) 6.75 0.009258 0.046013
GO:0008106 alcohol dehydrogenase (NADP+) activity 1.65% (2/121) 3.78 0.00938 0.046492
GO:0007568 aging 2.48% (3/121) 2.78 0.009706 0.047975
GO:0048826 cotyledon morphogenesis 1.65% (2/121) 3.75 0.009768 0.048154
GO:0098739 import across plasma membrane 3.31% (4/121) 2.27 0.009817 0.048264
GO:0046983 protein dimerization activity 9.09% (11/121) 1.17 0.010066 0.049352
GO:0016109 tetraterpenoid biosynthetic process 1.65% (2/121) 3.72 0.010164 0.049433
GO:0016117 carotenoid biosynthetic process 1.65% (2/121) 3.72 0.010164 0.049433
GO:0046185 aldehyde catabolic process 1.65% (2/121) 3.72 0.010164 0.049433
GO:0001666 response to hypoxia 4.96% (6/121) 1.72 0.010304 0.049847
GO:0032870 cellular response to hormone stimulus 4.96% (6/121) 1.72 0.010304 0.049847
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_76 0.013 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_89 0.007 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_143 0.007 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_163 0.007 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_168 0.007 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_232 0.008 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_329 0.01 Orthogroups with 8 Potato genotypes Compare
Sequences (121) (download table)

InterPro Domains

GO Terms

Family Terms