Coexpression cluster: Cluster_26 (HCCA Clusters (HRR 50 & PCC 0.5))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0008150 biological_process 83.47% (197/236) 0.44 0.0 0.0
GO:0003824 catalytic activity 55.51% (131/236) 0.75 0.0 0.0
GO:0005575 cellular_component 82.2% (194/236) 0.43 0.0 0.0
GO:0110165 cellular anatomical entity 81.36% (192/236) 0.44 0.0 0.0
GO:0003674 molecular_function 81.36% (192/236) 0.45 0.0 0.0
GO:0006952 defense response 30.93% (73/236) 1.2 0.0 0.0
GO:0098542 defense response to other organism 27.54% (65/236) 1.31 0.0 0.0
GO:0043207 response to external biotic stimulus 33.05% (78/236) 1.04 0.0 0.0
GO:0009605 response to external stimulus 37.71% (89/236) 0.92 0.0 0.0
GO:0051707 response to other organism 31.36% (74/236) 1.07 0.0 0.0
GO:0009607 response to biotic stimulus 33.05% (78/236) 1.02 0.0 0.0
GO:0008152 metabolic process 60.17% (142/236) 0.6 0.0 0.0
GO:0009506 plasmodesma 20.76% (49/236) 1.41 0.0 0.0
GO:0005911 cell-cell junction 20.76% (49/236) 1.37 0.0 0.0
GO:0071704 organic substance metabolic process 56.78% (134/236) 0.62 0.0 0.0
GO:0044419 biological process involved in interspecies interaction between organisms 31.36% (74/236) 1.03 0.0 0.0
GO:0070161 anchoring junction 20.76% (49/236) 1.36 0.0 0.0
GO:0006950 response to stress 46.61% (110/236) 0.74 0.0 0.0
GO:0009987 cellular process 71.19% (168/236) 0.45 0.0 0.0
GO:0030054 cell junction 22.03% (52/236) 1.25 0.0 0.0
GO:0005886 plasma membrane 27.97% (66/236) 1.03 0.0 1e-06
GO:0050896 response to stimulus 57.2% (135/236) 0.56 0.0 1e-06
GO:1900992 (-)-secologanin metabolic process 2.97% (7/236) 4.72 0.0 1e-06
GO:1900994 (-)-secologanin biosynthetic process 2.97% (7/236) 4.72 0.0 1e-06
GO:0006468 protein phosphorylation 13.14% (31/236) 1.71 0.0 1e-06
GO:0080076 caffeoyl CoA:S-adenosyl-L-methionine O-methyltransferase activity 2.12% (5/236) 5.99 0.0 1e-06
GO:0044237 cellular metabolic process 51.69% (122/236) 0.61 0.0 1e-06
GO:0042409 caffeoyl-CoA O-methyltransferase activity 2.12% (5/236) 5.89 0.0 1e-06
GO:0009423 chorismate biosynthetic process 2.97% (7/236) 4.59 0.0 1e-06
GO:1901806 beta-glucoside biosynthetic process 2.97% (7/236) 4.56 0.0 2e-06
GO:0016740 transferase activity 29.24% (69/236) 0.96 0.0 2e-06
GO:1901141 regulation of lignin biosynthetic process 4.66% (11/236) 3.29 0.0 2e-06
GO:0046417 chorismate metabolic process 2.97% (7/236) 4.51 0.0 2e-06
GO:0016020 membrane 44.49% (105/236) 0.66 0.0 5e-06
GO:0046777 protein autophosphorylation 9.75% (23/236) 1.87 0.0 8e-06
GO:0006793 phosphorus metabolic process 19.49% (46/236) 1.18 0.0 8e-06
GO:2000762 regulation of phenylpropanoid metabolic process 5.51% (13/236) 2.71 0.0 8e-06
GO:0043167 ion binding 32.2% (76/236) 0.83 0.0 9e-06
GO:0006796 phosphate-containing compound metabolic process 19.07% (45/236) 1.18 0.0 1.2e-05
GO:0009808 lignin metabolic process 5.51% (13/236) 2.65 0.0 1.2e-05
GO:0044238 primary metabolic process 47.88% (113/236) 0.59 0.0 1.2e-05
GO:0046184 aldehyde biosynthetic process 2.97% (7/236) 4.05 0.0 1.3e-05
GO:0016310 phosphorylation 13.56% (32/236) 1.46 0.0 1.3e-05
GO:1901804 beta-glucoside metabolic process 2.97% (7/236) 3.97 0.0 1.9e-05
GO:1901564 organonitrogen compound metabolic process 36.02% (85/236) 0.73 0.0 2.1e-05
GO:0004672 protein kinase activity 12.71% (30/236) 1.48 0.0 2.5e-05
GO:0043650 dicarboxylic acid biosynthetic process 2.97% (7/236) 3.89 0.0 2.6e-05
GO:0016301 kinase activity 13.98% (33/236) 1.37 1e-06 3.1e-05
GO:1901362 organic cyclic compound biosynthetic process 16.53% (39/236) 1.22 1e-06 3.5e-05
GO:0043169 cation binding 22.03% (52/236) 0.99 1e-06 4.4e-05
GO:0016773 phosphotransferase activity, alcohol group as acceptor 13.14% (31/236) 1.4 1e-06 4.4e-05
GO:0046872 metal ion binding 21.61% (51/236) 1.0 1e-06 5e-05
GO:0016098 monoterpenoid metabolic process 3.81% (9/236) 3.11 1e-06 5.5e-05
GO:0016099 monoterpenoid biosynthetic process 3.81% (9/236) 3.11 1e-06 5.5e-05
GO:0043231 intracellular membrane-bounded organelle 50.0% (118/236) 0.52 1e-06 5.8e-05
GO:1901700 response to oxygen-containing compound 28.39% (67/236) 0.8 2e-06 9.7e-05
GO:0050502 cis-zeatin O-beta-D-glucosyltransferase activity 2.97% (7/236) 3.56 2e-06 0.0001
GO:0043227 membrane-bounded organelle 50.0% (118/236) 0.5 2e-06 0.000103
GO:0009505 plant-type cell wall 8.05% (19/236) 1.82 2e-06 0.000104
GO:0005488 binding 64.83% (153/236) 0.37 3e-06 0.000127
GO:0036094 small molecule binding 21.61% (51/236) 0.95 3e-06 0.000128
GO:0042221 response to chemical 37.71% (89/236) 0.63 4e-06 0.000141
GO:0009751 response to salicylic acid 8.05% (19/236) 1.78 4e-06 0.000141
GO:0009698 phenylpropanoid metabolic process 8.9% (21/236) 1.65 4e-06 0.00017
GO:0050403 trans-zeatin O-beta-D-glucosyltransferase activity 2.97% (7/236) 3.41 5e-06 0.000179
GO:0016772 transferase activity, transferring phosphorus-containing groups 13.98% (33/236) 1.23 5e-06 0.000191
GO:0036211 protein modification process 19.92% (47/236) 0.97 6e-06 0.000205
GO:0006081 cellular aldehyde metabolic process 3.81% (9/236) 2.83 6e-06 0.000214
GO:0009073 aromatic amino acid family biosynthetic process 2.97% (7/236) 3.36 6e-06 0.000215
GO:0005618 cell wall 11.86% (28/236) 1.34 7e-06 0.000234
GO:0009809 lignin biosynthetic process 4.24% (10/236) 2.6 7e-06 0.000249
GO:0020037 heme binding 5.08% (12/236) 2.29 8e-06 0.000268
GO:0010597 green leaf volatile biosynthetic process 3.81% (9/236) 2.77 8e-06 0.000279
GO:0019372 lipoxygenase pathway 3.81% (9/236) 2.75 9e-06 0.000296
GO:0002221 pattern recognition receptor signaling pathway 4.24% (10/236) 2.53 1.1e-05 0.000364
GO:0014070 response to organic cyclic compound 12.29% (29/236) 1.26 1.3e-05 0.000425
GO:1900376 regulation of secondary metabolite biosynthetic process 4.66% (11/236) 2.31 1.7e-05 0.000534
GO:0043455 regulation of secondary metabolic process 5.93% (14/236) 1.97 1.7e-05 0.000539
GO:0033946 xyloglucan-specific endo-beta-1,4-glucanase activity 1.27% (3/236) 5.79 1.8e-05 0.000548
GO:0052736 beta-glucanase activity 1.27% (3/236) 5.79 1.8e-05 0.000548
GO:0016138 glycoside biosynthetic process 3.81% (9/236) 2.62 1.8e-05 0.000557
GO:0030312 external encapsulating structure 11.86% (28/236) 1.26 1.9e-05 0.000562
GO:0046527 glucosyltransferase activity 5.08% (12/236) 2.14 2.2e-05 0.000643
GO:0055081 anion homeostasis 3.39% (8/236) 2.8 2.2e-05 0.000651
GO:0007623 circadian rhythm 5.93% (14/236) 1.89 3.1e-05 0.0009
GO:0015020 glucuronosyltransferase activity 2.12% (5/236) 3.79 3.2e-05 0.000919
GO:0006690 icosanoid metabolic process 3.81% (9/236) 2.5 3.5e-05 0.000995
GO:0008652 cellular amino acid biosynthetic process 4.66% (11/236) 2.18 3.9e-05 0.001083
GO:0004675 transmembrane receptor protein serine/threonine kinase activity 2.97% (7/236) 2.93 4.1e-05 0.001141
GO:0046906 tetrapyrrole binding 5.08% (12/236) 2.03 4.6e-05 0.001249
GO:0006807 nitrogen compound metabolic process 39.83% (94/236) 0.51 5.1e-05 0.001395
GO:0043648 dicarboxylic acid metabolic process 3.39% (8/236) 2.62 5.3e-05 0.001414
GO:0031224 intrinsic component of membrane 17.37% (41/236) 0.92 5.3e-05 0.001421
GO:0000166 nucleotide binding 18.64% (44/236) 0.88 5.5e-05 0.00143
GO:1901265 nucleoside phosphate binding 18.64% (44/236) 0.88 5.5e-05 0.00143
GO:0004601 peroxidase activity 3.39% (8/236) 2.61 5.7e-05 0.001462
GO:2000022 regulation of jasmonic acid mediated signaling pathway 3.39% (8/236) 2.58 6.7e-05 0.001697
GO:0050776 regulation of immune response 9.32% (22/236) 1.34 6.8e-05 0.001722
GO:0099402 plant organ development 11.86% (28/236) 1.15 7.1e-05 0.001775
GO:0016684 oxidoreductase activity, acting on peroxide as acceptor 3.39% (8/236) 2.56 7.3e-05 0.00179
GO:0031348 negative regulation of defense response 5.51% (13/236) 1.86 7.3e-05 0.001792
GO:0016114 terpenoid biosynthetic process 5.51% (13/236) 1.86 7.5e-05 0.001817
GO:0005506 iron ion binding 4.66% (11/236) 2.06 7.8e-05 0.001851
GO:0009699 phenylpropanoid biosynthetic process 7.2% (17/236) 1.56 7.7e-05 0.001856
GO:0140096 catalytic activity, acting on a protein 18.64% (44/236) 0.85 8.3e-05 0.001935
GO:0004674 protein serine/threonine kinase activity 8.9% (21/236) 1.36 8.3e-05 0.001952
GO:0048511 rhythmic process 5.93% (14/236) 1.75 8.5e-05 0.00196
GO:0097159 organic cyclic compound binding 36.02% (85/236) 0.53 9.3e-05 0.002106
GO:0019748 secondary metabolic process 11.02% (26/236) 1.18 9.3e-05 0.002119
GO:0043229 intracellular organelle 52.12% (123/236) 0.38 9.8e-05 0.002192
GO:0016762 xyloglucan:xyloglucosyl transferase activity 1.69% (4/236) 4.05 0.0001 0.002198
GO:0065007 biological regulation 48.73% (115/236) 0.41 0.0001 0.002214
GO:0019538 protein metabolic process 22.46% (53/236) 0.74 0.000105 0.002262
GO:0009737 response to abscisic acid 10.17% (24/236) 1.23 0.000105 0.002268
GO:0032501 multicellular organismal process 27.97% (66/236) 0.64 0.000105 0.002284
GO:0016710 trans-cinnamate 4-monooxygenase activity 0.85% (2/236) 6.79 0.000108 0.002307
GO:0043226 organelle 52.12% (123/236) 0.38 0.00013 0.00274
GO:0019438 aromatic compound biosynthetic process 12.29% (29/236) 1.07 0.000132 0.002761
GO:0044255 cellular lipid metabolic process 12.71% (30/236) 1.05 0.000137 0.002836
GO:0090333 regulation of stomatal closure 3.39% (8/236) 2.42 0.00014 0.00287
GO:0010033 response to organic substance 27.97% (66/236) 0.62 0.000141 0.002884
GO:0140426 PAMP-triggered immunity signalling pathway 1.69% (4/236) 3.91 0.000145 0.002942
GO:0031663 lipopolysaccharide-mediated signaling pathway 2.54% (6/236) 2.9 0.000165 0.003274
GO:0051716 cellular response to stimulus 23.73% (56/236) 0.69 0.000164 0.003297
GO:0002764 immune response-regulating signaling pathway 5.08% (12/236) 1.82 0.000175 0.003453
GO:0050789 regulation of biological process 44.92% (106/236) 0.42 0.000181 0.00355
GO:0070887 cellular response to chemical stimulus 14.41% (34/236) 0.94 0.0002 0.003878
GO:0016209 antioxidant activity 3.39% (8/236) 2.33 0.000214 0.004123
GO:1901363 heterocyclic compound binding 35.17% (83/236) 0.51 0.000216 0.004131
GO:0010119 regulation of stomatal movement 5.51% (13/236) 1.7 0.000224 0.00422
GO:0008299 isoprenoid biosynthetic process 6.78% (16/236) 1.49 0.000224 0.004248
GO:0031347 regulation of defense response 11.02% (26/236) 1.09 0.000239 0.004475
GO:0097305 response to alcohol 10.59% (25/236) 1.12 0.000247 0.004574
GO:0038023 signaling receptor activity 5.93% (14/236) 1.6 0.000254 0.004672
GO:0002215 defense response to nematode 2.12% (5/236) 3.14 0.000273 0.004983
GO:0048364 root development 7.63% (18/236) 1.35 0.000285 0.005166
GO:0048046 apoplast 6.78% (16/236) 1.45 0.000292 0.00526
GO:0005774 vacuolar membrane 10.59% (25/236) 1.1 0.000297 0.005312
GO:0043412 macromolecule modification 19.92% (47/236) 0.73 0.00031 0.005501
GO:0016137 glycoside metabolic process 3.81% (9/236) 2.07 0.000343 0.006042
GO:0032502 developmental process 37.29% (88/236) 0.47 0.00035 0.006118
GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity 0.85% (2/236) 6.05 0.000359 0.006231
GO:0006721 terpenoid metabolic process 5.93% (14/236) 1.54 0.000382 0.006598
GO:0048856 anatomical structure development 29.24% (69/236) 0.55 0.000403 0.006906
GO:0009072 aromatic amino acid family metabolic process 2.97% (7/236) 2.38 0.000428 0.007036
GO:0043478 pigment accumulation in response to UV light 1.69% (4/236) 3.51 0.000426 0.007047
GO:0043479 pigment accumulation in tissues in response to UV light 1.69% (4/236) 3.51 0.000426 0.007047
GO:0043480 pigment accumulation in tissues 1.69% (4/236) 3.51 0.000426 0.007047
GO:0043481 anthocyanin accumulation in tissues in response to UV light 1.69% (4/236) 3.51 0.000426 0.007047
GO:0060089 molecular transducer activity 5.93% (14/236) 1.53 0.000422 0.007183
GO:0033993 response to lipid 15.68% (37/236) 0.83 0.000456 0.007453
GO:0006720 isoprenoid metabolic process 7.2% (17/236) 1.34 0.000473 0.007676
GO:0043476 pigment accumulation 1.69% (4/236) 3.46 0.000485 0.007762
GO:0016758 hexosyltransferase activity 5.51% (13/236) 1.58 0.000482 0.007778
GO:0050832 defense response to fungus 8.47% (20/236) 1.2 0.000505 0.008045
GO:1901428 regulation of syringal lignin biosynthetic process 1.69% (4/236) 3.44 0.000516 0.00811
GO:1901430 positive regulation of syringal lignin biosynthetic process 1.69% (4/236) 3.44 0.000516 0.00811
GO:0010331 gibberellin binding 0.85% (2/236) 5.79 0.000536 0.008314
GO:0008127 quercetin 2,3-dioxygenase activity 0.85% (2/236) 5.79 0.000536 0.008314
GO:0120255 olefinic compound biosynthetic process 2.97% (7/236) 2.33 0.000542 0.008355
GO:0002682 regulation of immune system process 9.32% (22/236) 1.12 0.00055 0.008427
GO:0016491 oxidoreductase activity 12.71% (30/236) 0.93 0.000563 0.008572
GO:0010200 response to chitin 5.93% (14/236) 1.48 0.000604 0.009145
GO:0016021 integral component of membrane 14.41% (34/236) 0.85 0.000641 0.009635
GO:0005975 carbohydrate metabolic process 8.9% (21/236) 1.13 0.000678 0.010144
GO:0005576 extracellular region 9.75% (23/236) 1.07 0.000688 0.01022
GO:0016311 dephosphorylation 3.81% (9/236) 1.92 0.000696 0.010226
GO:0003993 acid phosphatase activity 1.69% (4/236) 3.33 0.000696 0.010285
GO:0030224 monocyte differentiation 0.85% (2/236) 5.56 0.000747 0.010908
GO:0050794 regulation of cellular process 38.98% (92/236) 0.42 0.000761 0.011046
GO:0002229 defense response to oomycetes 2.97% (7/236) 2.24 0.000785 0.01132
GO:0044281 small molecule metabolic process 16.53% (39/236) 0.75 0.000831 0.011926
GO:1901701 cellular response to oxygen-containing compound 8.05% (19/236) 1.17 0.000878 0.012444
GO:0007166 cell surface receptor signaling pathway 4.24% (10/236) 1.75 0.000876 0.012485
GO:0009725 response to hormone 18.22% (43/236) 0.7 0.000959 0.01352
GO:0048229 gametophyte development 6.78% (16/236) 1.29 0.00098 0.013743
GO:0071215 cellular response to abscisic acid stimulus 2.54% (6/236) 2.41 0.001004 0.013996
GO:0000302 response to reactive oxygen species 5.51% (13/236) 1.46 0.001016 0.013998
GO:0048585 negative regulation of response to stimulus 11.02% (26/236) 0.95 0.001015 0.014063
GO:0022804 active transmembrane transporter activity 5.93% (14/236) 1.39 0.001044 0.014308
GO:0071456 cellular response to hypoxia 3.39% (8/236) 1.98 0.00107 0.014579
GO:0044550 secondary metabolite biosynthetic process 8.05% (19/236) 1.15 0.001097 0.014872
GO:0009719 response to endogenous stimulus 19.07% (45/236) 0.67 0.001123 0.015133
GO:0080053 response to phenylalanine 1.27% (3/236) 3.87 0.001132 0.015183
GO:1900425 negative regulation of defense response to bacterium 2.54% (6/236) 2.37 0.00115 0.015253
GO:0046914 transition metal ion binding 8.47% (20/236) 1.11 0.001148 0.015302
GO:0098771 inorganic ion homeostasis 5.93% (14/236) 1.37 0.001185 0.015638
GO:0034432 bis(5'-adenosyl)-pentaphosphatase activity 0.85% (2/236) 5.2 0.001271 0.01616
GO:0010325 raffinose family oligosaccharide biosynthetic process 0.85% (2/236) 5.2 0.001271 0.01616
GO:0007586 digestion 0.85% (2/236) 5.2 0.001271 0.01616
GO:0080044 quercetin 7-O-glucosyltransferase activity 2.12% (5/236) 2.66 0.001235 0.0162
GO:0036294 cellular response to decreased oxygen levels 3.39% (8/236) 1.95 0.001242 0.016211
GO:0016757 glycosyltransferase activity 5.93% (14/236) 1.37 0.001249 0.016216
GO:0009555 pollen development 5.51% (13/236) 1.43 0.001259 0.016265
GO:0005634 nucleus 21.61% (51/236) 0.6 0.001384 0.017507
GO:0019199 transmembrane receptor protein kinase activity 2.97% (7/236) 2.08 0.001462 0.018211
GO:0050801 ion homeostasis 6.36% (15/236) 1.29 0.001454 0.018211
GO:0015750 pentose transmembrane transport 1.27% (3/236) 3.75 0.001451 0.018263
GO:0010193 response to ozone 2.54% (6/236) 2.29 0.001528 0.018938
GO:0042742 defense response to bacterium 8.9% (21/236) 1.04 0.001537 0.018954
GO:0055063 sulfate ion homeostasis 1.27% (3/236) 3.71 0.001568 0.019154
GO:0072505 divalent inorganic anion homeostasis 1.27% (3/236) 3.71 0.001568 0.019154
GO:0009937 regulation of gibberellic acid mediated signaling pathway 2.54% (6/236) 2.28 0.001605 0.019509
GO:0005515 protein binding 47.46% (112/236) 0.33 0.001619 0.019582
GO:0080052 response to histidine 1.27% (3/236) 3.67 0.001692 0.020356
GO:0006629 lipid metabolic process 13.14% (31/236) 0.8 0.001766 0.021145
GO:1900424 regulation of defense response to bacterium 4.24% (10/236) 1.61 0.001821 0.021705
GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen 4.66% (11/236) 1.52 0.001839 0.021816
GO:0071446 cellular response to salicylic acid stimulus 1.69% (4/236) 2.95 0.001867 0.021938
GO:0004888 transmembrane signaling receptor activity 3.39% (8/236) 1.85 0.001863 0.021993
GO:0015146 pentose transmembrane transporter activity 1.27% (3/236) 3.6 0.001956 0.022865
GO:0008171 O-methyltransferase activity 2.12% (5/236) 2.5 0.00199 0.023154
GO:0009617 response to bacterium 11.44% (27/236) 0.86 0.002026 0.023465
GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds 3.81% (9/236) 1.69 0.002091 0.023998
GO:0106310 protein serine kinase activity 3.81% (9/236) 1.69 0.002091 0.023998
GO:0071453 cellular response to oxygen levels 3.39% (8/236) 1.82 0.002129 0.024317
GO:0010167 response to nitrate 2.12% (5/236) 2.47 0.002174 0.024602
GO:0120254 olefinic compound metabolic process 3.39% (8/236) 1.82 0.002164 0.024606
GO:1901659 glycosyl compound biosynthetic process 3.81% (9/236) 1.68 0.002184 0.024606
GO:0002218 activation of innate immune response 3.39% (8/236) 1.81 0.002236 0.025076
GO:0048878 chemical homeostasis 9.32% (22/236) 0.96 0.002312 0.025578
GO:0000289 nuclear-transcribed mRNA poly(A) tail shortening 0.85% (2/236) 4.79 0.002302 0.025582
GO:1900378 positive regulation of secondary metabolite biosynthetic process 1.69% (4/236) 2.86 0.002296 0.02563
GO:0043201 response to leucine 1.27% (3/236) 3.5 0.002398 0.026406
GO:0010104 regulation of ethylene-activated signaling pathway 2.12% (5/236) 2.44 0.002439 0.02662
GO:0070297 regulation of phosphorelay signal transduction system 2.12% (5/236) 2.44 0.002439 0.02662
GO:0045088 regulation of innate immune response 5.08% (12/236) 1.39 0.002455 0.026678
GO:0046864 isoprenoid transport 1.69% (4/236) 2.82 0.002583 0.027828
GO:0046865 terpenoid transport 1.69% (4/236) 2.82 0.002583 0.027828
GO:0035251 UDP-glucosyltransferase activity 3.39% (8/236) 1.77 0.002665 0.02859
GO:0005354 galactose transmembrane transporter activity 1.27% (3/236) 3.43 0.002724 0.028595
GO:0042592 homeostatic process 10.17% (24/236) 0.89 0.00272 0.028674
GO:0007275 multicellular organism development 11.86% (28/236) 0.81 0.002685 0.028675
GO:0015959 diadenosine polyphosphate metabolic process 0.85% (2/236) 4.67 0.00271 0.028691
GO:0004497 monooxygenase activity 5.08% (12/236) 1.37 0.0027 0.028706
GO:0016998 cell wall macromolecule catabolic process 1.69% (4/236) 2.79 0.002788 0.029141
GO:0043436 oxoacid metabolic process 11.86% (28/236) 0.8 0.002938 0.030454
GO:1901698 response to nitrogen compound 9.32% (22/236) 0.93 0.002928 0.030476
GO:0042538 hyperosmotic salinity response 2.97% (7/236) 1.9 0.002972 0.030675
GO:0010035 response to inorganic substance 15.68% (37/236) 0.67 0.003036 0.03121
GO:1905516 positive regulation of fertilization 0.85% (2/236) 4.56 0.003149 0.031968
GO:1905034 regulation of antifungal innate immune response 0.85% (2/236) 4.56 0.003149 0.031968
GO:0035442 dipeptide transmembrane transport 0.85% (2/236) 4.56 0.003149 0.031968
GO:0010087 phloem or xylem histogenesis 4.66% (11/236) 1.41 0.003241 0.032766
GO:0032870 cellular response to hormone stimulus 4.24% (10/236) 1.49 0.003342 0.033243
GO:0097306 cellular response to alcohol 2.54% (6/236) 2.07 0.003304 0.033271
GO:0005794 Golgi apparatus 7.63% (18/236) 1.04 0.003341 0.033365
GO:0002832 negative regulation of response to biotic stimulus 3.39% (8/236) 1.71 0.003402 0.033436
GO:0006082 organic acid metabolic process 12.29% (29/236) 0.77 0.003339 0.033481
GO:0080043 quercetin 3-O-glucosyltransferase activity 2.12% (5/236) 2.32 0.003461 0.033483
GO:1901657 glycosyl compound metabolic process 5.51% (13/236) 1.26 0.003386 0.033546
GO:0010243 response to organonitrogen compound 8.47% (20/236) 0.97 0.0034 0.03355
GO:0015334 high-affinity oligopeptide transmembrane transporter activity 1.27% (3/236) 3.31 0.003455 0.03356
GO:0080142 regulation of salicylic acid biosynthetic process 1.27% (3/236) 3.31 0.003455 0.03356
GO:0002833 positive regulation of response to biotic stimulus 5.51% (13/236) 1.26 0.00345 0.033771
GO:0006631 fatty acid metabolic process 5.08% (12/236) 1.31 0.003627 0.03468
GO:0004398 histidine decarboxylase activity 0.85% (2/236) 4.46 0.003619 0.034739
GO:0045446 endothelial cell differentiation 0.85% (2/236) 4.46 0.003619 0.034739
GO:0044264 cellular polysaccharide metabolic process 4.24% (10/236) 1.47 0.003673 0.034982
GO:0009820 alkaloid metabolic process 4.24% (10/236) 1.46 0.003759 0.035669
GO:0005351 carbohydrate:proton symporter activity 1.27% (3/236) 3.26 0.003862 0.036362
GO:0005402 carbohydrate:cation symporter activity 1.27% (3/236) 3.26 0.003862 0.036362
GO:0072593 reactive oxygen species metabolic process 2.54% (6/236) 2.01 0.00404 0.0379
GO:0010055 atrichoblast differentiation 0.85% (2/236) 4.37 0.00412 0.03835
GO:0048530 fruit morphogenesis 0.85% (2/236) 4.37 0.00412 0.03835
GO:0008324 cation transmembrane transporter activity 5.08% (12/236) 1.29 0.004239 0.039317
GO:1902458 positive regulation of stomatal opening 1.27% (3/236) 3.2 0.004296 0.039547
GO:0002758 innate immune response-activating signal transduction 2.54% (6/236) 1.99 0.004283 0.039576
GO:1900426 positive regulation of defense response to bacterium 2.54% (6/236) 1.99 0.004367 0.040046
GO:0051139 metal cation:proton antiporter activity 1.27% (3/236) 3.18 0.004524 0.041336
GO:0009620 response to fungus 10.17% (24/236) 0.83 0.004648 0.042311
GO:0010105 negative regulation of ethylene-activated signaling pathway 1.69% (4/236) 2.58 0.004686 0.042344
GO:0070298 negative regulation of phosphorelay signal transduction system 1.69% (4/236) 2.58 0.004686 0.042344
GO:0005355 glucose transmembrane transporter activity 1.27% (3/236) 3.12 0.005001 0.045029
GO:0015770 sucrose transport 1.27% (3/236) 3.1 0.005251 0.046765
GO:0010329 auxin efflux transmembrane transporter activity 1.27% (3/236) 3.1 0.005251 0.046765
GO:0048527 lateral root development 2.97% (7/236) 1.75 0.005215 0.046782
GO:0015766 disaccharide transport 1.27% (3/236) 3.03 0.006044 0.049048
GO:0030957 Tat protein binding 1.27% (3/236) 3.03 0.006044 0.049048
GO:0003855 3-dehydroquinate dehydratase activity 0.42% (1/236) 7.37 0.006038 0.049321
GO:0004764 shikimate 3-dehydrogenase (NADP+) activity 0.42% (1/236) 7.37 0.006038 0.049321
GO:0019002 GMP binding 0.42% (1/236) 7.37 0.006038 0.049321
GO:0020005 symbiont-containing vacuole membrane 0.42% (1/236) 7.37 0.006038 0.049321
GO:0004648 O-phospho-L-serine:2-oxoglutarate aminotransferase activity 0.42% (1/236) 7.37 0.006038 0.049321
GO:0003856 3-dehydroquinate synthase activity 0.42% (1/236) 7.37 0.006038 0.049321
GO:0008446 GDP-mannose 4,6-dehydratase activity 0.42% (1/236) 7.37 0.006038 0.049321
GO:0008466 glycogenin glucosyltransferase activity 0.42% (1/236) 7.37 0.006038 0.049321
GO:0102751 UDP-alpha-D-glucose:glucosyl-glycogenin alpha-D-glucosyltransferase activity 0.42% (1/236) 7.37 0.006038 0.049321
GO:0060389 pathway-restricted SMAD protein phosphorylation 0.42% (1/236) 7.37 0.006038 0.049321
GO:1905035 negative regulation of antifungal innate immune response 0.42% (1/236) 7.37 0.006038 0.049321
GO:0035106 operant conditioning 0.42% (1/236) 7.37 0.006038 0.049321
GO:0022610 obsolete biological adhesion 0.42% (1/236) 7.37 0.006038 0.049321
GO:0008194 UDP-glycosyltransferase activity 4.24% (10/236) 1.38 0.005615 0.049647
GO:1901576 organic substance biosynthetic process 21.19% (50/236) 0.51 0.005596 0.049662
GO:0010218 response to far red light 2.12% (5/236) 2.15 0.005713 0.0498
GO:0042626 ATPase-coupled transmembrane transporter activity 2.54% (6/236) 1.88 0.006187 0.049877
GO:0002757 immune response-activating signal transduction 2.54% (6/236) 1.91 0.005662 0.049887
GO:0002239 response to oomycetes 3.39% (8/236) 1.56 0.006172 0.049923
GO:0016791 phosphatase activity 3.39% (8/236) 1.58 0.005707 0.049928
GO:0032102 negative regulation of response to external stimulus 3.39% (8/236) 1.58 0.005707 0.049928
GO:0080060 integument development 1.27% (3/236) 3.05 0.005772 0.049965
GO:0071916 dipeptide transmembrane transporter activity 1.27% (3/236) 3.05 0.005772 0.049965
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_33 0.007 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_54 0.007 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_60 0.014 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_67 0.007 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_78 0.007 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_129 0.007 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_142 0.007 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_156 0.011 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_180 0.007 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_208 0.008 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_224 0.007 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_264 0.007 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_2 0.007 Orthogroups with 8 Potato genotypes Compare
Sequences (236) (download table)

InterPro Domains

GO Terms

Family Terms