Coexpression cluster: Cluster_14 (HCCA Clusters (HRR 50 & PCC 0.5))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0009055 electron transfer activity 25.74% (26/101) 5.91 0.0 0.0
GO:0022900 electron transport chain 24.75% (25/101) 5.32 0.0 0.0
GO:0034357 photosynthetic membrane 26.73% (27/101) 4.3 0.0 0.0
GO:0009535 chloroplast thylakoid membrane 25.74% (26/101) 4.34 0.0 0.0
GO:0055035 plastid thylakoid membrane 25.74% (26/101) 4.33 0.0 0.0
GO:0042651 thylakoid membrane 25.74% (26/101) 4.26 0.0 0.0
GO:0006091 generation of precursor metabolites and energy 24.75% (25/101) 4.12 0.0 0.0
GO:0042170 plastid membrane 25.74% (26/101) 3.58 0.0 0.0
GO:0015453 oxidoreduction-driven active transmembrane transporter activity 12.87% (13/101) 5.99 0.0 0.0
GO:0008137 NADH dehydrogenase (ubiquinone) activity 10.89% (11/101) 6.53 0.0 0.0
GO:0003955 NAD(P)H dehydrogenase (quinone) activity 10.89% (11/101) 6.03 0.0 0.0
GO:0050136 NADH dehydrogenase (quinone) activity 10.89% (11/101) 6.03 0.0 0.0
GO:0003954 NADH dehydrogenase activity 10.89% (11/101) 5.99 0.0 0.0
GO:0042773 ATP synthesis coupled electron transport 7.92% (8/101) 7.14 0.0 0.0
GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor 10.89% (11/101) 5.4 0.0 0.0
GO:0016168 chlorophyll binding 9.9% (10/101) 5.77 0.0 0.0
GO:0018298 obsolete protein-chromophore linkage 9.9% (10/101) 5.44 0.0 0.0
GO:0015399 primary active transmembrane transporter activity 14.85% (15/101) 4.0 0.0 0.0
GO:0022904 respiratory electron transport chain 9.9% (10/101) 5.36 0.0 0.0
GO:0048038 quinone binding 7.92% (8/101) 6.2 0.0 0.0
GO:0009521 photosystem 9.9% (10/101) 5.14 0.0 0.0
GO:0098796 membrane protein complex 17.82% (18/101) 3.19 0.0 0.0
GO:0016651 oxidoreductase activity, acting on NAD(P)H 10.89% (11/101) 4.54 0.0 0.0
GO:0046906 tetrapyrrole binding 14.85% (15/101) 3.58 0.0 0.0
GO:0019684 photosynthesis, light reaction 5.94% (6/101) 6.79 0.0 0.0
GO:0016021 integral component of membrane 29.7% (30/101) 1.89 0.0 0.0
GO:0016491 oxidoreductase activity 26.73% (27/101) 2.0 0.0 0.0
GO:0045156 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity 4.95% (5/101) 6.83 0.0 0.0
GO:0009772 photosynthetic electron transport in photosystem II 4.95% (5/101) 6.67 0.0 0.0
GO:0009575 chromoplast stroma 4.95% (5/101) 6.33 0.0 0.0
GO:0031224 intrinsic component of membrane 29.7% (30/101) 1.69 0.0 0.0
GO:0022804 active transmembrane transporter activity 14.85% (15/101) 2.72 0.0 0.0
GO:0009522 photosystem I 5.94% (6/101) 5.32 0.0 0.0
GO:0015979 photosynthesis 6.93% (7/101) 4.72 0.0 0.0
GO:0009767 photosynthetic electron transport chain 5.94% (6/101) 5.18 0.0 0.0
GO:0015988 energy coupled proton transmembrane transport, against electrochemical gradient 3.96% (4/101) 6.9 0.0 0.0
GO:0015990 electron transport coupled proton transport 3.96% (4/101) 6.9 0.0 0.0
GO:0015986 proton motive force-driven ATP synthesis 4.95% (5/101) 5.75 0.0 1e-06
GO:0006754 ATP biosynthetic process 4.95% (5/101) 5.3 0.0 3e-06
GO:0022857 transmembrane transporter activity 17.82% (18/101) 2.04 0.0 4e-06
GO:0009206 purine ribonucleoside triphosphate biosynthetic process 4.95% (5/101) 5.06 0.0 6e-06
GO:0009145 purine nucleoside triphosphate biosynthetic process 4.95% (5/101) 5.01 1e-06 7e-06
GO:0051539 4 iron, 4 sulfur cluster binding 5.94% (6/101) 4.32 1e-06 8e-06
GO:0031090 organelle membrane 31.68% (32/101) 1.3 1e-06 8e-06
GO:0005215 transporter activity 17.82% (18/101) 1.97 1e-06 8e-06
GO:0009201 ribonucleoside triphosphate biosynthetic process 4.95% (5/101) 4.77 1e-06 1.4e-05
GO:0051536 iron-sulfur cluster binding 6.93% (7/101) 3.68 1e-06 1.5e-05
GO:0051540 metal cluster binding 6.93% (7/101) 3.68 1e-06 1.5e-05
GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) 2.97% (3/101) 7.01 1e-06 1.6e-05
GO:0009142 nucleoside triphosphate biosynthetic process 4.95% (5/101) 4.53 3e-06 2.9e-05
GO:0010242 oxygen evolving activity 2.97% (3/101) 6.72 3e-06 3e-05
GO:0015078 proton transmembrane transporter activity 6.93% (7/101) 3.14 1.6e-05 0.000166
GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain 2.97% (3/101) 5.86 1.8e-05 0.000191
GO:0015252 proton channel activity 2.97% (3/101) 5.54 3.7e-05 0.000368
GO:0046933 proton-transporting ATP synthase activity, rotational mechanism 2.97% (3/101) 5.54 3.7e-05 0.000368
GO:0009152 purine ribonucleotide biosynthetic process 4.95% (5/101) 3.61 5.9e-05 0.000574
GO:0009523 photosystem II 3.96% (4/101) 4.24 6.3e-05 0.000605
GO:0046034 ATP metabolic process 4.95% (5/101) 3.56 7e-05 0.000661
GO:0006164 purine nucleotide biosynthetic process 4.95% (5/101) 3.53 7.8e-05 0.000729
GO:0009205 purine ribonucleoside triphosphate metabolic process 4.95% (5/101) 3.47 9.5e-05 0.000868
GO:0009570 chloroplast stroma 9.9% (10/101) 2.11 0.000113 0.001013
GO:0009144 purine nucleoside triphosphate metabolic process 4.95% (5/101) 3.4 0.000117 0.001036
GO:0009199 ribonucleoside triphosphate metabolic process 4.95% (5/101) 3.36 0.000133 0.001139
GO:0009260 ribonucleotide biosynthetic process 4.95% (5/101) 3.36 0.000133 0.001139
GO:0031360 intrinsic component of thylakoid membrane 1.98% (2/101) 6.79 0.000138 0.001143
GO:0031361 integral component of thylakoid membrane 1.98% (2/101) 6.79 0.000138 0.001143
GO:0009532 plastid stroma 9.9% (10/101) 2.06 0.000152 0.001247
GO:0046390 ribose phosphate biosynthetic process 4.95% (5/101) 3.3 0.000165 0.001333
GO:0009141 nucleoside triphosphate metabolic process 4.95% (5/101) 3.17 0.000248 0.001969
GO:0005751 mitochondrial respiratory chain complex IV 1.98% (2/101) 6.27 0.000293 0.002265
GO:1902600 proton transmembrane transport 3.96% (4/101) 3.67 0.000292 0.002285
GO:0045277 respiratory chain complex IV 1.98% (2/101) 6.01 0.000429 0.003265
GO:0072522 purine-containing compound biosynthetic process 4.95% (5/101) 2.97 0.000468 0.003512
GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1) 1.98% (2/101) 5.9 0.000506 0.003748
GO:0006123 mitochondrial electron transport, cytochrome c to oxygen 1.98% (2/101) 5.79 0.00059 0.004307
GO:0004129 cytochrome-c oxidase activity 1.98% (2/101) 5.69 0.000679 0.004833
GO:0016675 oxidoreductase activity, acting on a heme group of donors 1.98% (2/101) 5.69 0.000679 0.004833
GO:0009165 nucleotide biosynthetic process 4.95% (5/101) 2.84 0.000711 0.004996
GO:0009635 response to herbicide 2.97% (3/101) 4.09 0.000743 0.005153
GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor 2.97% (3/101) 4.07 0.000775 0.005244
GO:1901293 nucleoside phosphate biosynthetic process 4.95% (5/101) 2.81 0.000772 0.005287
GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors 2.97% (3/101) 3.77 0.001418 0.009478
GO:0070469 respirasome 1.98% (2/101) 5.01 0.001758 0.011608
GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain 1.98% (2/101) 4.9 0.002063 0.013147
GO:0080016 (-)-E-beta-caryophyllene synthase activity 1.98% (2/101) 4.9 0.002063 0.013147
GO:0022890 inorganic cation transmembrane transporter activity 6.93% (7/101) 1.98 0.002045 0.013339
GO:0000276 mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) 0.99% (1/101) 8.6 0.002584 0.01591
GO:0046684 response to pyrethroid 0.99% (1/101) 8.6 0.002584 0.01591
GO:0032991 protein-containing complex 22.77% (23/101) 0.88 0.00253 0.015937
GO:0070069 cytochrome complex 1.98% (2/101) 4.69 0.002743 0.016702
GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism 1.98% (2/101) 4.55 0.003313 0.019733
GO:0046961 proton-transporting ATPase activity, rotational mechanism 1.98% (2/101) 4.55 0.003313 0.019733
GO:0042625 ATPase-coupled ion transmembrane transporter activity 1.98% (2/101) 4.51 0.003514 0.020706
GO:0098798 mitochondrial protein-containing complex 3.96% (4/101) 2.68 0.00366 0.021336
GO:0020037 heme binding 4.95% (5/101) 2.25 0.004137 0.023861
GO:0000287 magnesium ion binding 4.95% (5/101) 2.23 0.004444 0.02537
GO:0009150 purine ribonucleotide metabolic process 4.95% (5/101) 2.2 0.004816 0.027208
GO:0030785 [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity 0.99% (1/101) 7.6 0.005161 0.028003
GO:0015842 aminergic neurotransmitter loading into synaptic vesicle 0.99% (1/101) 7.6 0.005161 0.028003
GO:0042416 dopamine biosynthetic process 0.99% (1/101) 7.6 0.005161 0.028003
GO:0009539 photosystem II reaction center 0.99% (1/101) 7.6 0.005161 0.028003
GO:0008324 cation transmembrane transporter activity 6.93% (7/101) 1.73 0.005292 0.028429
GO:0005506 iron ion binding 4.95% (5/101) 2.15 0.005571 0.029642
GO:0006163 purine nucleotide metabolic process 4.95% (5/101) 2.14 0.005786 0.030489
GO:0090377 seed trichome initiation 1.98% (2/101) 4.07 0.006354 0.03316
GO:0005743 mitochondrial inner membrane 2.97% (3/101) 2.99 0.006513 0.033672
GO:0009259 ribonucleotide metabolic process 4.95% (5/101) 2.09 0.006704 0.034335
GO:0009636 response to toxic substance 3.96% (4/101) 2.41 0.006983 0.035434
GO:0019693 ribose phosphate metabolic process 4.95% (5/101) 2.05 0.007392 0.037161
GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity 1.98% (2/101) 3.95 0.00747 0.037213
GO:0098700 neurotransmitter loading into synaptic vesicle 0.99% (1/101) 7.01 0.007732 0.038172
GO:0098800 inner mitochondrial membrane protein complex 2.97% (3/101) 2.89 0.007947 0.038885
GO:0015318 inorganic molecular entity transmembrane transporter activity 6.93% (7/101) 1.58 0.009268 0.044948
GO:0019646 aerobic electron transport chain 1.98% (2/101) 3.76 0.009619 0.045836
GO:0047461 (+)-delta-cadinene synthase activity 1.98% (2/101) 3.76 0.009619 0.045836
GO:0005261 cation channel activity 2.97% (3/101) 2.76 0.010022 0.047345
GO:0051597 response to methylmercury 0.99% (1/101) 6.6 0.010296 0.047816
GO:0048442 sepal development 1.98% (2/101) 3.71 0.010277 0.048137
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_20 0.007 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_28 0.007 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_53 0.008 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_85 0.024 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_91 0.007 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_109 0.126 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_111 0.007 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_114 0.007 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_127 0.026 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_145 0.007 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_148 0.008 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_170 0.009 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_178 0.008 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_184 0.007 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_204 0.082 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_319 0.012 Orthogroups with 8 Potato genotypes Compare
Sequences (101) (download table)

InterPro Domains

GO Terms

Family Terms