Coexpression cluster: Cluster_5 (HCCA Clusters (HRR 50 & PCC 0.5))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:1901570 fatty acid derivative biosynthetic process 5.43% (7/129) 3.91 0.0 0.000273
GO:0010166 wax metabolic process 5.43% (7/129) 4.0 0.0 0.000275
GO:0010025 wax biosynthetic process 5.43% (7/129) 4.12 0.0 0.000305
GO:1901568 fatty acid derivative metabolic process 5.43% (7/129) 3.32 7e-06 0.003178
GO:0005634 nucleus 27.91% (36/129) 0.97 4e-05 0.013842
GO:0010345 suberin biosynthetic process 4.65% (6/129) 3.14 6.6e-05 0.019034
GO:0065001 specification of axis polarity 3.88% (5/129) 3.09 0.000323 0.025352
GO:0043227 membrane-bounded organelle 50.39% (65/129) 0.51 0.000305 0.026358
GO:0010154 fruit development 3.1% (4/129) 3.63 0.000322 0.026458
GO:0001067 transcription regulatory region nucleic acid binding 13.18% (17/129) 1.41 0.00023 0.026525
GO:0043565 sequence-specific DNA binding 14.73% (19/129) 1.29 0.000265 0.026872
GO:0090706 specification of plant organ position 1.55% (2/129) 6.24 0.000299 0.02715
GO:0003690 double-stranded DNA binding 13.95% (18/129) 1.34 0.000252 0.027204
GO:0000976 transcription cis-regulatory region binding 13.18% (17/129) 1.41 0.000221 0.027246
GO:1990837 sequence-specific double-stranded DNA binding 13.18% (17/129) 1.38 0.000289 0.027683
GO:0043231 intracellular membrane-bounded organelle 50.39% (65/129) 0.53 0.000214 0.028449
GO:0003006 developmental process involved in reproduction 26.36% (34/129) 0.89 0.000208 0.029943
GO:0009725 response to hormone 22.48% (29/129) 1.0 0.000192 0.03012
GO:0009944 polarity specification of adaxial/abaxial axis 3.1% (4/129) 3.48 0.000482 0.032006
GO:0003677 DNA binding 18.6% (24/129) 1.14 0.00019 0.032803
GO:0009831 plant-type cell wall modification involved in multidimensional cell growth 2.33% (3/129) 4.3 0.000481 0.033194
GO:2000024 regulation of leaf development 3.1% (4/129) 3.85 0.000178 0.034171
GO:0010450 inflorescence meristem growth 1.55% (2/129) 5.92 0.000478 0.034395
GO:0047196 long-chain-alcohol O-fatty-acyltransferase activity 1.55% (2/129) 5.92 0.000478 0.034395
GO:0009719 response to endogenous stimulus 22.48% (29/129) 0.9 0.000591 0.037779
GO:0019748 secondary metabolic process 13.18% (17/129) 1.44 0.000177 0.038247
GO:0006970 response to osmotic stress 14.73% (19/129) 1.35 0.000158 0.03888
GO:0010074 maintenance of meristem identity 5.43% (7/129) 2.22 0.000828 0.040849
GO:0048832 specification of plant organ number 2.33% (3/129) 4.07 0.00077 0.041567
GO:0048833 specification of floral organ number 2.33% (3/129) 4.07 0.00077 0.041567
GO:0044550 secondary metabolite biosynthetic process 10.08% (13/129) 1.47 0.000871 0.041798
GO:0004144 diacylglycerol O-acyltransferase activity 1.55% (2/129) 5.54 0.000823 0.041811
GO:0050793 regulation of developmental process 20.93% (27/129) 0.92 0.000809 0.042322
GO:0048608 reproductive structure development 9.3% (12/129) 1.58 0.000712 0.0424
GO:0019827 stem cell population maintenance 6.2% (8/129) 2.07 0.000695 0.042872
GO:0019222 regulation of metabolic process 31.01% (40/129) 0.69 0.000928 0.043328
GO:0030912 response to deep water 1.55% (2/129) 5.44 0.000958 0.04355
GO:0098727 maintenance of cell number 6.2% (8/129) 2.05 0.00076 0.04373
GO:0048316 seed development 4.65% (6/129) 2.41 0.000991 0.043898
GO:0031323 regulation of cellular metabolic process 27.13% (35/129) 0.73 0.001261 0.049478
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_25 0.01 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_147 0.007 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_288 0.009 Orthogroups with 8 Potato genotypes Compare
Sequences (129) (download table)

InterPro Domains

GO Terms

Family Terms