Coexpression cluster: Cluster_23 (HCCA Clusters (HRR 50 & PCC 0.5))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0090378 seed trichome elongation 7.14% (5/70) 5.45 0.0 0.00016
GO:0006869 lipid transport 11.43% (8/70) 3.51 1e-06 0.000249
GO:0022412 cellular process involved in reproduction in multicellular organism 15.71% (11/70) 2.81 0.0 0.000301
GO:0033383 geranyl diphosphate metabolic process 5.71% (4/70) 5.24 4e-06 0.001422
GO:0003006 developmental process involved in reproduction 35.71% (25/70) 1.33 6e-06 0.001661
GO:0010334 sesquiterpene synthase activity 5.71% (4/70) 4.68 1.9e-05 0.004465
GO:0022414 reproductive process 38.57% (27/70) 1.13 2.7e-05 0.00554
GO:0016838 carbon-oxygen lyase activity, acting on phosphates 5.71% (4/70) 4.01 0.000117 0.009831
GO:0050184 phosphatidylcholine desaturase activity 2.86% (2/70) 6.96 0.000113 0.010075
GO:0102855 1-18:1-2-18:2-phosphatidylcholine desaturase activity 2.86% (2/70) 6.96 0.000113 0.010075
GO:0102857 1-18:1-2-18:3-phosphatidylcholinedesaturase activity 2.86% (2/70) 6.96 0.000113 0.010075
GO:0102860 1-18:1-2-18:2-phosphatidylcholine synthase activity 2.86% (2/70) 6.96 0.000113 0.010075
GO:0102861 1-18:2-2-18:1-phosphatidylcholine desaturase activity (SN2-18:2 forming) 2.86% (2/70) 6.96 0.000113 0.010075
GO:0102871 1-16:0-2-18:1-phosphatidylcholine desaturase activity 2.86% (2/70) 6.96 0.000113 0.010075
GO:0045485 omega-6 fatty acid desaturase activity 2.86% (2/70) 6.67 0.000172 0.010683
GO:0050183 phosphatidylcholine 12-monooxygenase activity 2.86% (2/70) 6.67 0.000172 0.010683
GO:0102985 delta12-fatty-acid desaturase activity 2.86% (2/70) 6.67 0.000172 0.010683
GO:0102987 palmitoleic acid delta 12 desaturase activity 2.86% (2/70) 6.67 0.000172 0.010683
GO:0047461 (+)-delta-cadinene synthase activity 4.29% (3/70) 4.88 0.00015 0.011912
GO:0048442 sepal development 4.29% (3/70) 4.83 0.000166 0.012506
GO:1901926 cadinene metabolic process 4.29% (3/70) 5.07 0.000101 0.014492
GO:1901928 cadinene biosynthetic process 4.29% (3/70) 5.07 0.000101 0.014492
GO:0003674 molecular_function 80.0% (56/70) 0.42 0.000257 0.014659
GO:0032502 developmental process 47.14% (33/70) 0.8 0.000247 0.014674
GO:0010333 terpene synthase activity 5.71% (4/70) 4.13 8.5e-05 0.015188
GO:0036109 alpha-linolenic acid metabolic process 2.86% (2/70) 6.32 0.000284 0.015582
GO:0048480 stigma development 4.29% (3/70) 4.44 0.000366 0.019351
GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water 4.29% (3/70) 4.39 0.000409 0.020877
GO:0051761 sesquiterpene metabolic process 5.71% (4/70) 3.33 0.000692 0.030898
GO:0051762 sesquiterpene biosynthetic process 5.71% (4/70) 3.33 0.000692 0.030898
GO:0006629 lipid metabolic process 20.0% (14/70) 1.41 0.000631 0.031058
GO:0009058 biosynthetic process 31.43% (22/70) 1.0 0.000754 0.031647
GO:0008150 biological_process 80.0% (56/70) 0.38 0.000737 0.031896
GO:0016491 oxidoreductase activity 18.57% (13/70) 1.47 0.000681 0.032419
GO:0009826 unidimensional cell growth 11.43% (8/70) 1.99 0.000894 0.03649
GO:0009734 auxin-activated signaling pathway 7.14% (5/70) 2.74 0.000924 0.036669
GO:1901576 organic substance biosynthetic process 30.0% (21/70) 1.01 0.000953 0.036763
GO:0003700 DNA-binding transcription factor activity 14.29% (10/70) 1.68 0.001042 0.039176
GO:0048653 anther development 5.71% (4/70) 3.16 0.001076 0.03939
GO:0060560 developmental growth involved in morphogenesis 12.86% (9/70) 1.78 0.001168 0.040672
GO:0044249 cellular biosynthetic process 28.57% (20/70) 1.03 0.001154 0.041187
GO:0009791 post-embryonic development 15.71% (11/70) 1.53 0.001324 0.042964
GO:0050896 response to stimulus 57.14% (40/70) 0.56 0.001363 0.04326
GO:0009639 response to red or far red light 8.57% (6/70) 2.28 0.00149 0.043431
GO:0140110 transcription regulator activity 15.71% (11/70) 1.54 0.001289 0.043833
GO:0048589 developmental growth 14.29% (10/70) 1.63 0.001322 0.043914
GO:0003690 double-stranded DNA binding 15.71% (11/70) 1.52 0.001454 0.04417
GO:0008610 lipid biosynthetic process 14.29% (10/70) 1.61 0.00149 0.044323
GO:0009725 response to hormone 24.29% (17/70) 1.11 0.001578 0.04506
GO:0048608 reproductive structure development 11.43% (8/70) 1.88 0.001453 0.045097
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_25 0.012 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_45 0.009 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_66 0.008 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_76 0.008 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_80 0.009 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_91 0.008 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_94 0.013 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_95 0.007 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_136 0.008 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_149 0.009 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_193 0.009 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_200 0.008 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_225 0.008 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_255 0.008 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_258 0.018 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_9 0.009 Orthogroups with 8 Potato genotypes Compare
Sequences (70) (download table)

InterPro Domains

GO Terms

Family Terms