Coexpression cluster: Cluster_68 (HCCA Clusters (HRR 50 & PCC 0.5))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0005975 carbohydrate metabolic process 20.59% (42/204) 2.34 0.0 0.0
GO:0071554 cell wall organization or biogenesis 20.1% (41/204) 2.41 0.0 0.0
GO:0005976 polysaccharide metabolic process 15.69% (32/204) 2.75 0.0 0.0
GO:0000271 polysaccharide biosynthetic process 11.27% (23/204) 3.47 0.0 0.0
GO:0031224 intrinsic component of membrane 29.9% (61/204) 1.7 0.0 0.0
GO:0045488 pectin metabolic process 10.29% (21/204) 3.35 0.0 0.0
GO:0010192 mucilage biosynthetic process 6.86% (14/204) 4.47 0.0 0.0
GO:0010393 galacturonan metabolic process 10.29% (21/204) 3.33 0.0 0.0
GO:0016021 integral component of membrane 25.98% (53/204) 1.7 0.0 0.0
GO:0016020 membrane 53.43% (109/204) 0.92 0.0 0.0
GO:0005911 cell-cell junction 25.49% (52/204) 1.67 0.0 0.0
GO:0070161 anchoring junction 25.49% (52/204) 1.66 0.0 0.0
GO:0009506 plasmodesma 25.0% (51/204) 1.68 0.0 0.0
GO:0016051 carbohydrate biosynthetic process 11.27% (23/204) 2.89 0.0 0.0
GO:0044264 cellular polysaccharide metabolic process 11.27% (23/204) 2.88 0.0 0.0
GO:0042546 cell wall biogenesis 9.8% (20/204) 3.08 0.0 0.0
GO:0044262 cellular carbohydrate metabolic process 12.75% (26/204) 2.54 0.0 0.0
GO:0033692 cellular polysaccharide biosynthetic process 8.33% (17/204) 3.32 0.0 0.0
GO:0010191 mucilage metabolic process 7.35% (15/204) 3.62 0.0 0.0
GO:0005802 trans-Golgi network 11.27% (23/204) 2.65 0.0 0.0
GO:0030054 cell junction 25.98% (53/204) 1.49 0.0 0.0
GO:0052546 cell wall pectin metabolic process 5.88% (12/204) 4.12 0.0 0.0
GO:0030243 cellulose metabolic process 5.88% (12/204) 4.04 0.0 0.0
GO:0044036 cell wall macromolecule metabolic process 8.82% (18/204) 3.02 0.0 0.0
GO:0055028 cortical microtubule 5.88% (12/204) 4.03 0.0 0.0
GO:0098791 Golgi apparatus subcompartment 11.76% (24/204) 2.46 0.0 0.0
GO:0110165 cellular anatomical entity 81.86% (167/204) 0.44 0.0 0.0
GO:0010383 cell wall polysaccharide metabolic process 7.84% (16/204) 3.21 0.0 0.0
GO:0034637 cellular carbohydrate biosynthetic process 8.33% (17/204) 3.01 0.0 0.0
GO:0005881 cytoplasmic microtubule 5.88% (12/204) 3.84 0.0 0.0
GO:0009505 plant-type cell wall 11.76% (24/204) 2.36 0.0 0.0
GO:0005575 cellular_component 81.86% (167/204) 0.42 0.0 0.0
GO:0044085 cellular component biogenesis 10.29% (21/204) 2.53 0.0 0.0
GO:0045489 pectin biosynthetic process 5.88% (12/204) 3.68 0.0 0.0
GO:0006073 cellular glucan metabolic process 7.84% (16/204) 2.98 0.0 0.0
GO:0051273 beta-glucan metabolic process 5.88% (12/204) 3.64 0.0 0.0
GO:0044042 glucan metabolic process 7.84% (16/204) 2.96 0.0 0.0
GO:0005618 cell wall 16.18% (33/204) 1.79 0.0 0.0
GO:0030312 external encapsulating structure 16.67% (34/204) 1.75 0.0 0.0
GO:0030244 cellulose biosynthetic process 4.9% (10/204) 4.05 0.0 0.0
GO:0051274 beta-glucan biosynthetic process 4.9% (10/204) 3.94 0.0 0.0
GO:0098588 bounding membrane of organelle 21.08% (43/204) 1.43 0.0 0.0
GO:0071669 plant-type cell wall organization or biogenesis 10.29% (21/204) 2.31 0.0 0.0
GO:0016757 glycosyltransferase activity 10.78% (22/204) 2.23 0.0 0.0
GO:0031984 organelle subcompartment 12.25% (25/204) 2.0 0.0 0.0
GO:0005886 plasma membrane 28.92% (59/204) 1.08 0.0 0.0
GO:0099513 polymeric cytoskeletal fiber 7.84% (16/204) 2.54 0.0 1e-06
GO:0034645 cellular macromolecule biosynthetic process 10.29% (21/204) 2.09 0.0 1e-06
GO:0099081 supramolecular polymer 7.84% (16/204) 2.46 0.0 2e-06
GO:0099512 supramolecular fiber 7.84% (16/204) 2.46 0.0 2e-06
GO:0009250 glucan biosynthetic process 4.9% (10/204) 3.38 0.0 2e-06
GO:0005768 endosome 12.25% (25/204) 1.81 0.0 3e-06
GO:0000902 cell morphogenesis 13.24% (27/204) 1.71 0.0 3e-06
GO:0071555 cell wall organization 10.78% (22/204) 1.96 0.0 3e-06
GO:0048359 mucilage metabolic process involved in seed coat development 4.9% (10/204) 3.33 0.0 3e-06
GO:0010395 rhamnogalacturonan I metabolic process 2.94% (6/204) 4.81 0.0 3e-06
GO:0031410 cytoplasmic vesicle 15.2% (31/204) 1.54 0.0 4e-06
GO:0000139 Golgi membrane 7.84% (16/204) 2.38 0.0 4e-06
GO:0005874 microtubule 6.86% (14/204) 2.6 0.0 4e-06
GO:0009987 cellular process 70.1% (143/204) 0.42 0.0 5e-06
GO:0097708 intracellular vesicle 15.2% (31/204) 1.5 0.0 6e-06
GO:0045229 external encapsulating structure organization 11.76% (24/204) 1.74 0.0 1e-05
GO:0016758 hexosyltransferase activity 8.33% (17/204) 2.18 0.0 1e-05
GO:0071840 cellular component organization or biogenesis 31.86% (65/204) 0.87 0.0 1.2e-05
GO:0097435 supramolecular fiber organization 6.37% (13/204) 2.58 0.0 1.2e-05
GO:0043229 intracellular organelle 57.35% (117/204) 0.52 0.0 1.2e-05
GO:0043226 organelle 57.35% (117/204) 0.51 1e-06 1.7e-05
GO:0016049 cell growth 12.75% (26/204) 1.58 1e-06 2.3e-05
GO:0070592 cell wall polysaccharide biosynthetic process 4.41% (9/204) 3.19 1e-06 2.4e-05
GO:0016740 transferase activity 28.43% (58/204) 0.92 1e-06 2.5e-05
GO:0043231 intracellular membrane-bounded organelle 51.47% (105/204) 0.56 1e-06 2.7e-05
GO:0010330 cellulose synthase complex 1.96% (4/204) 5.68 1e-06 3e-05
GO:0031982 vesicle 15.2% (31/204) 1.37 1e-06 3.8e-05
GO:0044038 cell wall macromolecule biosynthetic process 4.41% (9/204) 3.1 1e-06 3.8e-05
GO:0070589 cellular component macromolecule biosynthetic process 4.41% (9/204) 3.1 1e-06 3.8e-05
GO:0008092 cytoskeletal protein binding 7.84% (16/204) 2.09 1e-06 4.4e-05
GO:0003674 molecular_function 75.49% (154/204) 0.34 2e-06 4.5e-05
GO:0043227 membrane-bounded organelle 51.47% (105/204) 0.54 2e-06 4.6e-05
GO:0009059 macromolecule biosynthetic process 11.76% (24/204) 1.58 2e-06 5.2e-05
GO:0048354 mucilage biosynthetic process involved in seed coat development 2.94% (6/204) 3.92 3e-06 8.6e-05
GO:0005774 vacuolar membrane 13.24% (27/204) 1.42 3e-06 9.2e-05
GO:0009832 plant-type cell wall biogenesis 5.39% (11/204) 2.55 3e-06 9.6e-05
GO:0009834 plant-type secondary cell wall biogenesis 4.41% (9/204) 2.91 4e-06 9.9e-05
GO:0031090 organelle membrane 24.51% (50/204) 0.93 4e-06 0.000107
GO:0008150 biological_process 76.47% (156/204) 0.31 4e-06 0.000108
GO:0006004 fucose metabolic process 2.45% (5/204) 4.38 4e-06 0.000112
GO:0003824 catalytic activity 48.04% (98/204) 0.54 6e-06 0.000151
GO:0009825 multidimensional cell growth 3.92% (8/204) 3.04 7e-06 0.00017
GO:0006833 water transport 3.43% (7/204) 3.33 7e-06 0.000172
GO:0008194 UDP-glycosyltransferase activity 6.86% (14/204) 2.08 7e-06 0.000184
GO:0019318 hexose metabolic process 3.92% (8/204) 3.02 7e-06 0.000185
GO:0032502 developmental process 41.18% (84/204) 0.61 8e-06 0.000198
GO:0051016 barbed-end actin filament capping 1.96% (4/204) 4.94 8e-06 0.000203
GO:0005996 monosaccharide metabolic process 4.41% (9/204) 2.75 9e-06 0.000222
GO:0043622 cortical microtubule organization 3.43% (7/204) 3.25 1e-05 0.00023
GO:0042044 fluid transport 3.43% (7/204) 3.25 1e-05 0.00023
GO:0019187 beta-1,4-mannosyltransferase activity 1.96% (4/204) 4.88 1e-05 0.000232
GO:0051753 mannan synthase activity 1.96% (4/204) 4.88 1e-05 0.000232
GO:0047617 acyl-CoA hydrolase activity 1.47% (3/204) 6.0 1.1e-05 0.000263
GO:2001006 regulation of cellulose biosynthetic process 2.45% (5/204) 4.05 1.3e-05 0.000305
GO:0040007 growth 13.24% (27/204) 1.3 1.6e-05 0.000355
GO:0010400 rhamnogalacturonan I side chain metabolic process 1.47% (3/204) 5.85 1.6e-05 0.000359
GO:0047259 glucomannan 4-beta-mannosyltransferase activity 1.47% (3/204) 5.85 1.6e-05 0.000359
GO:0032950 regulation of beta-glucan metabolic process 2.45% (5/204) 3.9 2.2e-05 0.000471
GO:0032951 regulation of beta-glucan biosynthetic process 2.45% (5/204) 3.9 2.2e-05 0.000471
GO:0009653 anatomical structure morphogenesis 18.14% (37/204) 1.03 2.4e-05 0.00052
GO:0009833 plant-type primary cell wall biogenesis 1.96% (4/204) 4.54 2.6e-05 0.000553
GO:0045010 actin nucleation 1.96% (4/204) 4.49 3e-05 0.000607
GO:0051693 actin filament capping 1.96% (4/204) 4.49 3e-05 0.000607
GO:0005576 extracellular region 11.76% (24/204) 1.34 2.9e-05 0.000613
GO:0099080 supramolecular complex 8.33% (17/204) 1.67 3.1e-05 0.000638
GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds 5.39% (11/204) 2.19 3.4e-05 0.000696
GO:0010410 hemicellulose metabolic process 3.92% (8/204) 2.71 3.6e-05 0.000714
GO:0000226 microtubule cytoskeleton organization 5.88% (12/204) 2.01 5.2e-05 0.001031
GO:0031225 anchored component of membrane 4.9% (10/204) 2.25 5.6e-05 0.001094
GO:0030835 negative regulation of actin filament depolymerization 1.96% (4/204) 4.26 5.7e-05 0.001098
GO:0043255 regulation of carbohydrate biosynthetic process 4.41% (9/204) 2.41 5.7e-05 0.001107
GO:0009664 plant-type cell wall organization 5.39% (11/204) 2.09 6.6e-05 0.001273
GO:0031122 cytoplasmic microtubule organization 3.43% (7/204) 2.82 6.7e-05 0.001281
GO:0007017 microtubule-based process 6.86% (14/204) 1.77 7.2e-05 0.001356
GO:0010497 plasmodesmata-mediated intercellular transport 2.45% (5/204) 3.55 7.3e-05 0.001356
GO:1900386 positive regulation of flavonol biosynthetic process 1.47% (3/204) 5.17 7.5e-05 0.001383
GO:0004565 beta-galactosidase activity 1.96% (4/204) 4.09 9.1e-05 0.001629
GO:0000030 mannosyltransferase activity 1.96% (4/204) 4.09 9.1e-05 0.001629
GO:0030245 cellulose catabolic process 1.47% (3/204) 5.08 9e-05 0.001646
GO:0046658 anchored component of plasma membrane 3.92% (8/204) 2.52 9e-05 0.001647
GO:0010148 transpiration 1.96% (4/204) 4.06 9.9e-05 0.001763
GO:0055080 cation homeostasis 6.86% (14/204) 1.72 0.000108 0.001895
GO:0030837 negative regulation of actin filament polymerization 1.96% (4/204) 4.03 0.000108 0.001904
GO:0031226 intrinsic component of plasma membrane 5.88% (12/204) 1.89 0.000111 0.001935
GO:0048317 seed morphogenesis 1.96% (4/204) 4.0 0.000117 0.002021
GO:1901880 negative regulation of protein depolymerization 1.96% (4/204) 3.97 0.000127 0.002175
GO:0051238 sequestering of metal ion 1.96% (4/204) 3.94 0.000137 0.002337
GO:0008017 microtubule binding 3.92% (8/204) 2.42 0.00014 0.002364
GO:0030865 cortical cytoskeleton organization 3.43% (7/204) 2.63 0.00015 0.002507
GO:0017012 protein-phytochromobilin linkage 0.98% (2/204) 6.58 0.000162 0.002666
GO:0031517 red light photoreceptor activity 0.98% (2/204) 6.58 0.000162 0.002666
GO:0022414 reproductive process 27.94% (57/204) 0.67 0.000167 0.002736
GO:0010118 stomatal movement 3.92% (8/204) 2.38 0.000169 0.002751
GO:0051015 actin filament binding 2.94% (6/204) 2.88 0.000178 0.002856
GO:0045491 xylan metabolic process 2.94% (6/204) 2.88 0.000178 0.002856
GO:0010675 regulation of cellular carbohydrate metabolic process 4.41% (9/204) 2.17 0.0002 0.003165
GO:0015925 galactosidase activity 1.96% (4/204) 3.8 0.000199 0.003176
GO:0045492 xylan biosynthetic process 2.45% (5/204) 3.23 0.000204 0.003198
GO:0072507 divalent inorganic cation homeostasis 3.43% (7/204) 2.54 0.00022 0.003428
GO:0008810 cellulase activity 1.47% (3/204) 4.64 0.00023 0.003557
GO:0032272 negative regulation of protein polymerization 1.96% (4/204) 3.72 0.000245 0.00372
GO:0010438 cellular response to sulfur starvation 1.96% (4/204) 3.72 0.000245 0.00372
GO:1900384 regulation of flavonol biosynthetic process 1.96% (4/204) 3.72 0.000245 0.00372
GO:0030834 regulation of actin filament depolymerization 1.96% (4/204) 3.7 0.000262 0.003948
GO:0003831 beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase activity 0.98% (2/204) 6.26 0.000268 0.004017
GO:0098771 inorganic ion homeostasis 6.86% (14/204) 1.58 0.000282 0.00419
GO:0048511 rhythmic process 5.88% (12/204) 1.74 0.000289 0.004269
GO:0043242 negative regulation of protein-containing complex disassembly 1.96% (4/204) 3.65 0.000298 0.004373
GO:0009827 plant-type cell wall modification 3.92% (8/204) 2.26 0.000306 0.004459
GO:0016760 cellulose synthase (UDP-forming) activity 1.47% (3/204) 4.47 0.000333 0.00477
GO:0072699 protein localization to cortical microtubule cytoskeleton 1.47% (3/204) 4.47 0.000333 0.00477
GO:0016798 hydrolase activity, acting on glycosyl bonds 5.88% (12/204) 1.72 0.000333 0.004828
GO:0097502 mannosylation 1.47% (3/204) 4.41 0.000374 0.005312
GO:0004713 protein tyrosine kinase activity 3.43% (7/204) 2.41 0.000382 0.005394
GO:0009747 hexokinase-dependent signaling 0.98% (2/204) 6.0 0.000401 0.005597
GO:0019158 mannokinase activity 0.98% (2/204) 6.0 0.000401 0.005597
GO:0031306 intrinsic component of mitochondrial outer membrane 1.47% (3/204) 4.36 0.000417 0.005746
GO:0031307 integral component of mitochondrial outer membrane 1.47% (3/204) 4.36 0.000417 0.005746
GO:0010962 regulation of glucan biosynthetic process 2.45% (5/204) 2.99 0.000449 0.006113
GO:2000067 regulation of root morphogenesis 1.96% (4/204) 3.49 0.000452 0.006117
GO:0044260 cellular macromolecule metabolic process 16.18% (33/204) 0.88 0.000447 0.006125
GO:0010496 intercellular transport 2.45% (5/204) 2.95 0.000502 0.006756
GO:0016759 cellulose synthase activity 1.47% (3/204) 4.26 0.000513 0.006817
GO:0072697 protein localization to cell cortex 1.47% (3/204) 4.26 0.000513 0.006817
GO:0007010 cytoskeleton organization 6.37% (13/204) 1.57 0.000518 0.006852
GO:0016772 transferase activity, transferring phosphorus-containing groups 12.25% (25/204) 1.04 0.000539 0.007085
GO:0004340 glucokinase activity 0.98% (2/204) 5.77 0.000559 0.007187
GO:0009883 red or far-red light photoreceptor activity 0.98% (2/204) 5.77 0.000559 0.007187
GO:0010617 circadian regulation of calcium ion oscillation 0.98% (2/204) 5.77 0.000559 0.007187
GO:0031516 far-red light photoreceptor activity 0.98% (2/204) 5.77 0.000559 0.007187
GO:0000904 cell morphogenesis involved in differentiation 7.35% (15/204) 1.42 0.000567 0.007241
GO:0016773 phosphotransferase activity, alcohol group as acceptor 10.78% (22/204) 1.11 0.000589 0.007484
GO:0015631 tubulin binding 3.92% (8/204) 2.11 0.000605 0.007639
GO:0010090 trichome morphogenesis 2.45% (5/204) 2.86 0.000667 0.00833
GO:0032885 regulation of polysaccharide biosynthetic process 2.45% (5/204) 2.86 0.000667 0.00833
GO:0030833 regulation of actin filament polymerization 1.96% (4/204) 3.33 0.000689 0.008559
GO:0080147 root hair cell development 2.45% (5/204) 2.84 0.000714 0.008818
GO:0016301 kinase activity 11.27% (23/204) 1.06 0.000728 0.008945
GO:0046835 carbohydrate phosphorylation 1.47% (3/204) 4.08 0.000744 0.008947
GO:0051211 anisotropic cell growth 1.47% (3/204) 4.08 0.000744 0.008947
GO:0017007 protein-bilin linkage 0.98% (2/204) 5.58 0.000743 0.009037
GO:0017009 protein-phycocyanobilin linkage 0.98% (2/204) 5.58 0.000743 0.009037
GO:0044238 primary metabolic process 42.65% (87/204) 0.42 0.000767 0.009174
GO:0009932 cell tip growth 5.39% (11/204) 1.66 0.000824 0.00976
GO:0009524 phragmoplast 3.43% (7/204) 2.22 0.000823 0.009793
GO:0016289 CoA hydrolase activity 1.47% (3/204) 4.0 0.000881 0.010373
GO:0009826 unidimensional cell growth 7.35% (15/204) 1.35 0.000897 0.010512
GO:1901879 regulation of protein depolymerization 1.96% (4/204) 3.22 0.000917 0.010684
GO:0055082 cellular chemical homeostasis 5.39% (11/204) 1.63 0.000963 0.011169
GO:0016043 cellular component organization 25.0% (51/204) 0.61 0.000972 0.011212
GO:0050801 ion homeostasis 6.86% (14/204) 1.4 0.001 0.011478
GO:0010005 cortical microtubule, transverse to long axis 1.47% (3/204) 3.92 0.001033 0.011794
GO:0035250 UDP-galactosyltransferase activity 1.47% (3/204) 3.88 0.001115 0.0126
GO:0010037 response to carbon dioxide 2.45% (5/204) 2.69 0.001114 0.01266
GO:0010411 xyloglucan metabolic process 1.96% (4/204) 3.14 0.001143 0.01286
GO:0042545 cell wall modification 4.9% (10/204) 1.7 0.001168 0.01307
GO:0071668 plant-type cell wall assembly 0.98% (2/204) 5.26 0.001187 0.013151
GO:2001007 negative regulation of cellulose biosynthetic process 0.98% (2/204) 5.26 0.001187 0.013151
GO:0009058 biosynthetic process 24.02% (49/204) 0.61 0.001247 0.013755
GO:0003779 actin binding 2.94% (6/204) 2.32 0.001374 0.015085
GO:0019725 cellular homeostasis 5.88% (12/204) 1.48 0.001389 0.015174
GO:0048868 pollen tube development 1.96% (4/204) 3.06 0.001406 0.015288
GO:0010058 regulation of atrichoblast fate specification 0.98% (2/204) 5.12 0.001445 0.015414
GO:0010059 positive regulation of atrichoblast fate specification 0.98% (2/204) 5.12 0.001445 0.015414
GO:0008865 fructokinase activity 0.98% (2/204) 5.12 0.001445 0.015414
GO:0017006 protein-tetrapyrrole linkage 0.98% (2/204) 5.12 0.001445 0.015414
GO:0008064 regulation of actin polymerization or depolymerization 1.96% (4/204) 3.04 0.001464 0.015464
GO:0030832 regulation of actin filament length 1.96% (4/204) 3.04 0.001464 0.015464
GO:0031542 positive regulation of anthocyanin biosynthetic process 1.47% (3/204) 3.74 0.001482 0.015588
GO:0070085 glycosylation 2.94% (6/204) 2.28 0.001566 0.016393
GO:0055074 calcium ion homeostasis 2.45% (5/204) 2.57 0.001617 0.016844
GO:0071244 cellular response to carbon dioxide 1.96% (4/204) 3.0 0.001645 0.016985
GO:0005773 vacuole 9.31% (19/204) 1.09 0.001645 0.017057
GO:0051511 negative regulation of unidimensional cell growth 0.98% (2/204) 5.0 0.001728 0.017524
GO:0004396 hexokinase activity 0.98% (2/204) 5.0 0.001728 0.017524
GO:0010398 xylogalacturonan metabolic process 0.98% (2/204) 5.0 0.001728 0.017524
GO:0005794 Golgi apparatus 8.33% (17/204) 1.16 0.001707 0.017542
GO:0051493 regulation of cytoskeleton organization 3.43% (7/204) 2.04 0.00174 0.017561
GO:0007623 circadian rhythm 4.9% (10/204) 1.62 0.001763 0.017716
GO:0008152 metabolic process 50.0% (102/204) 0.33 0.001829 0.018218
GO:0030003 cellular cation homeostasis 4.41% (9/204) 1.72 0.001821 0.018222
GO:0031333 negative regulation of protein-containing complex assembly 1.96% (4/204) 2.95 0.001842 0.018265
GO:1903338 regulation of cell wall organization or biogenesis 2.94% (6/204) 2.22 0.00193 0.019055
GO:1903085 regulation of sinapate ester biosynthetic process 1.47% (3/204) 3.58 0.002038 0.01928
GO:1903086 negative regulation of sinapate ester biosynthetic process 1.47% (3/204) 3.58 0.002038 0.01928
GO:0051494 negative regulation of cytoskeleton organization 1.96% (4/204) 2.92 0.001982 0.019396
GO:1902904 negative regulation of supramolecular fiber organization 1.96% (4/204) 2.92 0.001982 0.019396
GO:0010061 regulation of trichoblast fate specification 0.98% (2/204) 4.88 0.002036 0.01942
GO:0010063 positive regulation of trichoblast fate specification 0.98% (2/204) 4.88 0.002036 0.01942
GO:1903888 regulation of plant epidermal cell differentiation 0.98% (2/204) 4.88 0.002036 0.01942
GO:1903890 positive regulation of plant epidermal cell differentiation 0.98% (2/204) 4.88 0.002036 0.01942
GO:0019586 galacturonate metabolic process 0.98% (2/204) 4.88 0.002036 0.01942
GO:0055065 metal ion homeostasis 4.9% (10/204) 1.59 0.002024 0.019726
GO:0032271 regulation of protein polymerization 1.96% (4/204) 2.9 0.002129 0.020053
GO:0009226 nucleotide-sugar biosynthetic process 1.47% (3/204) 3.55 0.002163 0.020289
GO:0009625 response to insect 2.45% (5/204) 2.46 0.002268 0.021192
GO:1900377 negative regulation of secondary metabolite biosynthetic process 1.47% (3/204) 3.52 0.002292 0.021325
GO:0042660 positive regulation of cell fate specification 0.98% (2/204) 4.77 0.002367 0.021841
GO:0006063 uronic acid metabolic process 0.98% (2/204) 4.77 0.002367 0.021841
GO:0044087 regulation of cellular component biogenesis 5.39% (11/204) 1.46 0.002427 0.022303
GO:0010439 regulation of glucosinolate biosynthetic process 1.96% (4/204) 2.84 0.002445 0.022379
GO:0032387 negative regulation of intracellular transport 1.47% (3/204) 3.47 0.002565 0.023194
GO:0097272 ammonium homeostasis 1.47% (3/204) 3.47 0.002565 0.023194
GO:0097275 cellular ammonium homeostasis 1.47% (3/204) 3.47 0.002565 0.023194
GO:0006873 cellular ion homeostasis 4.41% (9/204) 1.64 0.002645 0.023827
GO:0051275 beta-glucan catabolic process 1.47% (3/204) 3.44 0.002708 0.024297
GO:0004672 protein kinase activity 9.31% (19/204) 1.03 0.002721 0.024316
GO:0016310 phosphorylation 9.8% (20/204) 0.99 0.002765 0.024617
GO:0043170 macromolecule metabolic process 30.88% (63/204) 0.47 0.002963 0.026273
GO:0009073 aromatic amino acid family biosynthetic process 1.96% (4/204) 2.76 0.002977 0.026295
GO:0031539 positive regulation of anthocyanin metabolic process 1.47% (3/204) 3.36 0.003168 0.027871
GO:0110053 regulation of actin filament organization 1.96% (4/204) 2.72 0.003271 0.028667
GO:0043680 filiform apparatus 1.47% (3/204) 3.33 0.003331 0.029081
GO:0009507 chloroplast 8.82% (18/204) 1.03 0.003399 0.029559
GO:0070726 cell wall assembly 0.98% (2/204) 4.49 0.003501 0.030327
GO:0060089 molecular transducer activity 5.39% (11/204) 1.39 0.003535 0.030502
GO:0044380 protein localization to cytoskeleton 1.47% (3/204) 3.28 0.003673 0.031339
GO:0072698 protein localization to microtubule cytoskeleton 1.47% (3/204) 3.28 0.003673 0.031339
GO:0010214 seed coat development 2.94% (6/204) 2.04 0.003658 0.031445
GO:0032881 regulation of polysaccharide metabolic process 2.94% (6/204) 2.03 0.003722 0.031515
GO:0044249 cellular biosynthetic process 21.08% (43/204) 0.59 0.003721 0.031631
GO:0005522 profilin binding 0.98% (2/204) 4.41 0.003925 0.031808
GO:0034406 cell wall beta-glucan metabolic process 0.98% (2/204) 4.41 0.003925 0.031808
GO:0034410 cell wall beta-glucan biosynthetic process 0.98% (2/204) 4.41 0.003925 0.031808
GO:0052324 plant-type cell wall cellulose biosynthetic process 0.98% (2/204) 4.41 0.003925 0.031808
GO:0052541 plant-type cell wall cellulose metabolic process 0.98% (2/204) 4.41 0.003925 0.031808
GO:0032504 multicellular organism reproduction 0.98% (2/204) 4.41 0.003925 0.031808
GO:0005536 glucose binding 0.98% (2/204) 4.41 0.003925 0.031808
GO:0000155 phosphorelay sensor kinase activity 0.98% (2/204) 4.41 0.003925 0.031808
GO:0009960 endosperm development 1.96% (4/204) 2.66 0.003804 0.03209
GO:0030308 negative regulation of cell growth 2.45% (5/204) 2.28 0.00386 0.032326
GO:0015691 cadmium ion transport 1.47% (3/204) 3.26 0.003852 0.032374
GO:0051234 establishment of localization 18.14% (37/204) 0.65 0.003895 0.032495
GO:0006109 regulation of carbohydrate metabolic process 4.41% (9/204) 1.54 0.00413 0.033348
GO:0051235 maintenance of location 2.45% (5/204) 2.25 0.004291 0.034527
GO:0016722 oxidoreductase activity, acting on metal ions 0.98% (2/204) 4.33 0.004372 0.035051
GO:0060560 developmental growth involved in morphogenesis 7.84% (16/204) 1.07 0.004432 0.035281
GO:0009225 nucleotide-sugar metabolic process 1.47% (3/204) 3.19 0.004419 0.035304
GO:0048878 chemical homeostasis 9.31% (19/204) 0.96 0.004461 0.035389
GO:0000162 tryptophan biosynthetic process 1.47% (3/204) 3.17 0.004619 0.036386
GO:0046219 indolalkylamine biosynthetic process 1.47% (3/204) 3.17 0.004619 0.036386
GO:0009536 plastid 10.78% (22/204) 0.87 0.004751 0.037302
GO:0009757 hexose mediated signaling 0.98% (2/204) 4.26 0.004841 0.037483
GO:0010255 glucose mediated signaling pathway 0.98% (2/204) 4.26 0.004841 0.037483
GO:0010244 response to low fluence blue light stimulus by blue low-fluence system 0.98% (2/204) 4.26 0.004841 0.037483
GO:0052793 pectin acetylesterase activity 0.98% (2/204) 4.26 0.004841 0.037483
GO:0019276 UDP-N-acetylgalactosamine metabolic process 0.49% (1/204) 7.58 0.005219 0.04
GO:0052630 UDP-N-acetylgalactosamine diphosphorylase activity 0.49% (1/204) 7.58 0.005219 0.04
GO:0007107 membrane addition at site of cytokinesis 0.49% (1/204) 7.58 0.005219 0.04
GO:0010071 root meristem specification 0.98% (2/204) 4.19 0.005332 0.040592
GO:0007368 determination of left/right symmetry 0.98% (2/204) 4.19 0.005332 0.040592
GO:0019320 hexose catabolic process 0.98% (2/204) 4.12 0.005845 0.044201
GO:0140299 small molecule sensor activity 0.98% (2/204) 4.12 0.005845 0.044201
GO:0048856 anatomical structure development 27.45% (56/204) 0.46 0.005944 0.044646
GO:0032592 integral component of mitochondrial membrane 1.47% (3/204) 3.04 0.005931 0.044701
GO:0006810 transport 17.16% (35/204) 0.63 0.005997 0.044899
GO:0043244 regulation of protein-containing complex disassembly 1.96% (4/204) 2.47 0.006048 0.04513
GO:0048363 mucilage pectin metabolic process 1.47% (3/204) 3.02 0.006169 0.045885
GO:0022603 regulation of anatomical structure morphogenesis 6.37% (13/204) 1.15 0.006381 0.047149
GO:0010455 positive regulation of cell fate commitment 0.98% (2/204) 4.06 0.00638 0.047296
GO:0010091 trichome branching 2.45% (5/204) 2.1 0.006479 0.047717
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_110 0.008 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_115 0.007 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_129 0.007 Orthogroups with 8 Potato genotypes Compare
Sequences (204) (download table)

InterPro Domains

GO Terms

Family Terms