Coexpression cluster: Cluster_117 (HCCA Clusters (HRR 50 & PCC 0.5))

View as:



Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0010074 maintenance of meristem identity 20.97% (13/62) 4.17 0.0 0.0
GO:0098727 maintenance of cell number 20.97% (13/62) 3.81 0.0 0.0
GO:0019827 stem cell population maintenance 20.97% (13/62) 3.83 0.0 0.0
GO:1901959 positive regulation of cutin biosynthetic process 8.06% (5/62) 7.45 0.0 0.0
GO:0060774 auxin mediated signaling pathway involved in phyllotactic patterning 8.06% (5/62) 7.04 0.0 0.0
GO:0080037 negative regulation of cytokinin-activated signaling pathway 8.06% (5/62) 6.98 0.0 0.0
GO:0060772 leaf phyllotactic patterning 8.06% (5/62) 6.87 0.0 0.0
GO:0060771 phyllotactic patterning 8.06% (5/62) 6.76 0.0 0.0
GO:0048830 adventitious root development 9.68% (6/62) 5.8 0.0 0.0
GO:0010078 maintenance of root meristem identity 11.29% (7/62) 4.91 0.0 0.0
GO:1990110 callus formation 11.29% (7/62) 4.87 0.0 0.0
GO:0045995 regulation of embryonic development 11.29% (7/62) 4.84 0.0 0.0
GO:0006110 regulation of glycolytic process 8.06% (5/62) 6.26 0.0 1e-06
GO:0003700 DNA-binding transcription factor activity 25.81% (16/62) 2.53 0.0 1e-06
GO:0001653 peptide receptor activity 9.68% (6/62) 5.3 0.0 1e-06
GO:0099402 plant organ development 27.42% (17/62) 2.36 0.0 1e-06
GO:0009956 radial pattern formation 9.68% (6/62) 5.14 0.0 1e-06
GO:0040019 positive regulation of embryonic development 8.06% (5/62) 5.89 0.0 1e-06
GO:0043470 regulation of carbohydrate catabolic process 8.06% (5/62) 5.79 0.0 2e-06
GO:0019432 triglyceride biosynthetic process 8.06% (5/62) 5.76 0.0 2e-06
GO:0010082 regulation of root meristem growth 9.68% (6/62) 4.93 0.0 2e-06
GO:0010449 root meristem growth 8.06% (5/62) 5.67 0.0 2e-06
GO:1903578 regulation of ATP metabolic process 8.06% (5/62) 5.69 0.0 2e-06
GO:0046460 neutral lipid biosynthetic process 8.06% (5/62) 5.62 0.0 3e-06
GO:0046463 acylglycerol biosynthetic process 8.06% (5/62) 5.62 0.0 3e-06
GO:1900542 regulation of purine nucleotide metabolic process 8.06% (5/62) 5.56 0.0 3e-06
GO:0000723 telomere maintenance 9.68% (6/62) 4.79 0.0 3e-06
GO:0032200 telomere organization 9.68% (6/62) 4.79 0.0 3e-06
GO:0080036 regulation of cytokinin-activated signaling pathway 8.06% (5/62) 5.49 0.0 4e-06
GO:0006641 triglyceride metabolic process 8.06% (5/62) 5.41 0.0 4e-06
GO:0140110 transcription regulator activity 25.81% (16/62) 2.25 0.0 4e-06
GO:0006140 regulation of nucleotide metabolic process 8.06% (5/62) 5.39 0.0 4e-06
GO:0010087 phloem or xylem histogenesis 16.13% (10/62) 3.2 0.0 4e-06
GO:0035266 meristem growth 8.06% (5/62) 5.26 0.0 7e-06
GO:2000280 regulation of root development 12.9% (8/62) 3.62 0.0 9e-06
GO:1901957 regulation of cutin biosynthetic process 8.06% (5/62) 5.13 0.0 1e-05
GO:0050793 regulation of developmental process 35.48% (22/62) 1.68 0.0 1.1e-05
GO:0003006 developmental process involved in reproduction 40.32% (25/62) 1.5 0.0 1.2e-05
GO:2000241 regulation of reproductive process 22.58% (14/62) 2.32 1e-06 1.5e-05
GO:0010492 maintenance of shoot apical meristem identity 8.06% (5/62) 4.91 1e-06 2e-05
GO:0007389 pattern specification process 19.35% (12/62) 2.55 1e-06 2.1e-05
GO:0045723 positive regulation of fatty acid biosynthetic process 8.06% (5/62) 4.88 1e-06 2.1e-05
GO:0040008 regulation of growth 22.58% (14/62) 2.27 1e-06 2.1e-05
GO:0010187 negative regulation of seed germination 8.06% (5/62) 4.84 1e-06 2.3e-05
GO:0032502 developmental process 56.45% (35/62) 1.06 1e-06 2.4e-05
GO:0006638 neutral lipid metabolic process 8.06% (5/62) 4.72 1e-06 3.2e-05
GO:0006639 acylglycerol metabolic process 8.06% (5/62) 4.73 1e-06 3.2e-05
GO:0048367 shoot system development 14.52% (9/62) 3.04 1e-06 3.3e-05
GO:0048829 root cap development 6.45% (4/62) 5.57 2e-06 3.5e-05
GO:0080092 regulation of pollen tube growth 9.68% (6/62) 4.06 2e-06 3.7e-05
GO:0009888 tissue development 19.35% (12/62) 2.44 2e-06 3.7e-05
GO:0022414 reproductive process 43.55% (27/62) 1.31 2e-06 3.7e-05
GO:0048856 anatomical structure development 46.77% (29/62) 1.23 2e-06 3.7e-05
GO:0003002 regionalization 16.13% (10/62) 2.75 2e-06 4.1e-05
GO:0045923 positive regulation of fatty acid metabolic process 8.06% (5/62) 4.59 2e-06 4.3e-05
GO:0048646 anatomical structure formation involved in morphogenesis 19.35% (12/62) 2.34 3e-06 6.5e-05
GO:0009791 post-embryonic development 22.58% (14/62) 2.06 5e-06 8.8e-05
GO:0080050 regulation of seed development 8.06% (5/62) 4.35 5e-06 9.3e-05
GO:0051239 regulation of multicellular organismal process 27.42% (17/62) 1.77 5e-06 9.5e-05
GO:0010769 regulation of cell morphogenesis involved in differentiation 9.68% (6/62) 3.76 6e-06 0.0001
GO:0062013 positive regulation of small molecule metabolic process 9.68% (6/62) 3.74 6e-06 0.000109
GO:0010311 lateral root formation 9.68% (6/62) 3.64 9e-06 0.000156
GO:0000976 transcription cis-regulatory region binding 20.97% (13/62) 2.08 9e-06 0.000156
GO:0001067 transcription regulatory region nucleic acid binding 20.97% (13/62) 2.08 9e-06 0.000157
GO:0048731 system development 16.13% (10/62) 2.49 1e-05 0.000165
GO:0032501 multicellular organismal process 41.94% (26/62) 1.22 1e-05 0.000166
GO:1905177 tracheary element differentiation 6.45% (4/62) 4.89 1.1e-05 0.000172
GO:0042304 regulation of fatty acid biosynthetic process 8.06% (5/62) 4.11 1.1e-05 0.000178
GO:1990837 sequence-specific double-stranded DNA binding 20.97% (13/62) 2.05 1.1e-05 0.000179
GO:0009744 response to sucrose 9.68% (6/62) 3.55 1.3e-05 0.000201
GO:0034285 response to disaccharide 9.68% (6/62) 3.53 1.4e-05 0.000209
GO:0010075 regulation of meristem growth 9.68% (6/62) 3.5 1.5e-05 0.000232
GO:0042277 peptide binding 9.68% (6/62) 3.5 1.6e-05 0.000233
GO:0005992 trehalose biosynthetic process 4.84% (3/62) 5.89 1.8e-05 0.000269
GO:0005991 trehalose metabolic process 4.84% (3/62) 5.8 2.2e-05 0.00032
GO:0010453 regulation of cell fate commitment 6.45% (4/62) 4.61 2.3e-05 0.000324
GO:0006561 proline biosynthetic process 4.84% (3/62) 5.76 2.4e-05 0.00034
GO:1905393 plant organ formation 11.29% (7/62) 3.02 2.5e-05 0.00035
GO:0003690 double-stranded DNA binding 20.97% (13/62) 1.93 2.7e-05 0.000367
GO:0043467 regulation of generation of precursor metabolites and energy 8.06% (5/62) 3.84 2.7e-05 0.000367
GO:0045017 glycerolipid biosynthetic process 8.06% (5/62) 3.81 3e-05 0.000404
GO:0009628 response to abiotic stimulus 41.94% (26/62) 1.13 3.1e-05 0.000414
GO:0031155 regulation of reproductive fruiting body development 4.84% (3/62) 5.6 3.3e-05 0.000439
GO:0019217 regulation of fatty acid metabolic process 8.06% (5/62) 3.76 3.5e-05 0.000451
GO:0006560 proline metabolic process 4.84% (3/62) 5.56 3.6e-05 0.000463
GO:0033218 amide binding 9.68% (6/62) 3.23 4.3e-05 0.000548
GO:0075260 regulation of spore-bearing organ development 4.84% (3/62) 5.46 4.5e-05 0.000563
GO:0051510 regulation of unidimensional cell growth 9.68% (6/62) 3.21 4.7e-05 0.000589
GO:0009873 ethylene-activated signaling pathway 8.06% (5/62) 3.65 5e-05 0.000619
GO:0009831 plant-type cell wall modification involved in multidimensional cell growth 4.84% (3/62) 5.36 5.5e-05 0.000667
GO:0046889 positive regulation of lipid biosynthetic process 8.06% (5/62) 3.59 6.2e-05 0.000741
GO:0009064 glutamine family amino acid metabolic process 6.45% (4/62) 4.23 6.3e-05 0.00075
GO:0043565 sequence-specific DNA binding 20.97% (13/62) 1.8 6.7e-05 0.000792
GO:0006790 sulfur compound metabolic process 14.52% (9/62) 2.32 7.4e-05 0.000859
GO:0051093 negative regulation of developmental process 14.52% (9/62) 2.3 8.2e-05 0.000939
GO:0048364 root development 14.52% (9/62) 2.28 8.9e-05 0.001012
GO:0106310 protein serine kinase activity 9.68% (6/62) 3.04 9.2e-05 0.001032
GO:0045595 regulation of cell differentiation 12.9% (8/62) 2.46 9.7e-05 0.001068
GO:0045834 positive regulation of lipid metabolic process 8.06% (5/62) 3.45 9.6e-05 0.001074
GO:0009700 indole phytoalexin biosynthetic process 4.84% (3/62) 5.03 0.00011 0.001158
GO:0010120 camalexin biosynthetic process 4.84% (3/62) 5.03 0.00011 0.001158
GO:0046217 indole phytoalexin metabolic process 4.84% (3/62) 5.03 0.00011 0.001158
GO:0052317 camalexin metabolic process 4.84% (3/62) 5.03 0.00011 0.001158
GO:0048638 regulation of developmental growth 14.52% (9/62) 2.25 0.000108 0.001178
GO:0000160 phosphorelay signal transduction system 8.06% (5/62) 3.38 0.00012 0.001251
GO:0046351 disaccharide biosynthetic process 4.84% (3/62) 4.95 0.000128 0.001308
GO:0010228 vegetative to reproductive phase transition of meristem 8.06% (5/62) 3.36 0.000128 0.001318
GO:0051276 chromosome organization 9.68% (6/62) 2.91 0.000149 0.001506
GO:0009084 glutamine family amino acid biosynthetic process 4.84% (3/62) 4.82 0.000169 0.001698
GO:0050789 regulation of biological process 56.45% (35/62) 0.75 0.000177 0.001757
GO:0019748 secondary metabolic process 17.74% (11/62) 1.87 0.000179 0.001762
GO:0010088 phloem development 4.84% (3/62) 4.78 0.000185 0.001803
GO:0065001 specification of axis polarity 6.45% (4/62) 3.82 0.000189 0.001825
GO:0006970 response to osmotic stress 19.35% (12/62) 1.75 0.000194 0.001859
GO:0009743 response to carbohydrate 11.29% (7/62) 2.52 0.000212 0.002013
GO:0045770 positive regulation of asymmetric cell division 3.23% (2/62) 6.49 0.000223 0.002097
GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific 8.06% (5/62) 3.16 0.000248 0.002295
GO:0042547 cell wall modification involved in multidimensional cell growth 4.84% (3/62) 4.64 0.000246 0.002298
GO:0005634 nucleus 32.26% (20/62) 1.18 0.00025 0.0023
GO:0022604 regulation of cell morphogenesis 9.68% (6/62) 2.75 0.00027 0.002458
GO:0048229 gametophyte development 12.9% (8/62) 2.22 0.000304 0.002748
GO:0009312 oligosaccharide biosynthetic process 4.84% (3/62) 4.53 0.000308 0.002757
GO:1900056 negative regulation of leaf senescence 4.84% (3/62) 4.49 0.00033 0.002912
GO:0051094 positive regulation of developmental process 14.52% (9/62) 2.03 0.000329 0.002927
GO:0046486 glycerolipid metabolic process 8.06% (5/62) 3.06 0.000343 0.002977
GO:0019900 kinase binding 11.29% (7/62) 2.41 0.000341 0.002981
GO:0048437 floral organ development 8.06% (5/62) 3.05 0.000352 0.003026
GO:0048581 negative regulation of post-embryonic development 9.68% (6/62) 2.67 0.000356 0.003037
GO:0043231 intracellular membrane-bounded organelle 56.45% (35/62) 0.69 0.000421 0.003567
GO:0009755 hormone-mediated signaling pathway 16.13% (10/62) 1.83 0.000448 0.003764
GO:0090058 metaxylem development 3.23% (2/62) 5.98 0.000462 0.003853
GO:0065007 biological regulation 58.06% (36/62) 0.66 0.000498 0.004124
GO:0009934 regulation of meristem structural organization 4.84% (3/62) 4.27 0.000519 0.004266
GO:0009266 response to temperature stimulus 19.35% (12/62) 1.59 0.000523 0.004269
GO:0043227 membrane-bounded organelle 56.45% (35/62) 0.68 0.000533 0.004287
GO:0009734 auxin-activated signaling pathway 8.06% (5/62) 2.92 0.00053 0.00429
GO:0010410 hemicellulose metabolic process 6.45% (4/62) 3.42 0.00054 0.004312
GO:0019216 regulation of lipid metabolic process 9.68% (6/62) 2.53 0.000605 0.004791
GO:0010455 positive regulation of cell fate commitment 3.23% (2/62) 5.78 0.000613 0.00482
GO:0009651 response to salt stress 16.13% (10/62) 1.76 0.000647 0.005018
GO:0048608 reproductive structure development 12.9% (8/62) 2.05 0.000647 0.005049
GO:0048103 somatic stem cell division 3.23% (2/62) 5.72 0.000668 0.005106
GO:0046622 positive regulation of organ growth 3.23% (2/62) 5.72 0.000668 0.005106
GO:0048878 chemical homeostasis 16.13% (10/62) 1.75 0.00068 0.005163
GO:0042127 regulation of cell population proliferation 11.29% (7/62) 2.24 0.000695 0.005241
GO:0010981 regulation of cell wall macromolecule metabolic process 3.23% (2/62) 5.66 0.000725 0.00543
GO:1903224 regulation of endodermal cell differentiation 3.23% (2/62) 5.55 0.000847 0.006297
GO:0009968 negative regulation of signal transduction 12.9% (8/62) 1.99 0.000875 0.006465
GO:0009786 regulation of asymmetric cell division 3.23% (2/62) 5.49 0.000911 0.006684
GO:0009718 anthocyanin-containing compound biosynthetic process 4.84% (3/62) 3.98 0.000935 0.006814
GO:0046620 regulation of organ growth 4.84% (3/62) 3.94 0.001004 0.007269
GO:0006355 regulation of DNA-templated transcription 22.58% (14/62) 1.33 0.001026 0.007378
GO:0048831 regulation of shoot system development 9.68% (6/62) 2.37 0.001082 0.007482
GO:0010648 negative regulation of cell communication 12.9% (8/62) 1.94 0.001089 0.007486
GO:0023057 negative regulation of signaling 12.9% (8/62) 1.94 0.001079 0.007508
GO:0052314 phytoalexin metabolic process 4.84% (3/62) 3.9 0.001101 0.007523
GO:2001141 regulation of RNA biosynthetic process 22.58% (14/62) 1.32 0.001061 0.007528
GO:1903506 regulation of nucleic acid-templated transcription 22.58% (14/62) 1.32 0.001055 0.007535
GO:0052315 phytoalexin biosynthetic process 4.84% (3/62) 3.91 0.001077 0.007543
GO:0009725 response to hormone 25.81% (16/62) 1.2 0.001075 0.007579
GO:0090059 protoxylem development 3.23% (2/62) 5.35 0.001117 0.007586
GO:0010029 regulation of seed germination 8.06% (5/62) 2.66 0.001182 0.007879
GO:0009403 toxin biosynthetic process 4.84% (3/62) 3.86 0.001178 0.007898
GO:0009733 response to auxin 11.29% (7/62) 2.11 0.001172 0.007905
GO:0016143 S-glycoside metabolic process 8.06% (5/62) 2.64 0.001246 0.008108
GO:0019757 glycosinolate metabolic process 8.06% (5/62) 2.64 0.001246 0.008108
GO:0019760 glucosinolate metabolic process 8.06% (5/62) 2.64 0.001246 0.008108
GO:0046890 regulation of lipid biosynthetic process 8.06% (5/62) 2.64 0.001246 0.008108
GO:1902265 abscisic acid homeostasis 3.23% (2/62) 5.26 0.001266 0.008189
GO:0038023 signaling receptor activity 9.68% (6/62) 2.31 0.001327 0.008532
GO:0031328 positive regulation of cellular biosynthetic process 17.74% (11/62) 1.5 0.001475 0.009428
GO:0051240 positive regulation of multicellular organismal process 11.29% (7/62) 2.04 0.001515 0.009626
GO:0033612 receptor serine/threonine kinase binding 4.84% (3/62) 3.73 0.001548 0.009782
GO:0048481 plant ovule development 4.84% (3/62) 3.72 0.001579 0.009922
GO:0005783 endoplasmic reticulum 14.52% (9/62) 1.7 0.00164 0.010187
GO:0090567 reproductive shoot system development 8.06% (5/62) 2.55 0.001632 0.010194
GO:0009891 positive regulation of biosynthetic process 17.74% (11/62) 1.48 0.001695 0.010468
GO:0060089 molecular transducer activity 9.68% (6/62) 2.23 0.001718 0.01055
GO:1900140 regulation of seedling development 8.06% (5/62) 2.53 0.001769 0.010742
GO:0003677 DNA binding 20.97% (13/62) 1.31 0.001761 0.010753
GO:0005984 disaccharide metabolic process 4.84% (3/62) 3.63 0.001878 0.011155
GO:1901564 organonitrogen compound metabolic process 38.71% (24/62) 0.83 0.001857 0.011155
GO:0042592 homeostatic process 16.13% (10/62) 1.56 0.001875 0.011197
GO:0048869 cellular developmental process 19.35% (12/62) 1.37 0.001897 0.011205
GO:0048759 xylem vessel member cell differentiation 3.23% (2/62) 4.98 0.001857 0.011215
GO:0001558 regulation of cell growth 9.68% (6/62) 2.2 0.001944 0.011361
GO:0010383 cell wall polysaccharide metabolic process 6.45% (4/62) 2.93 0.001935 0.011371
GO:0022603 regulation of anatomical structure morphogenesis 11.29% (7/62) 1.97 0.001971 0.01146
GO:0046283 anthocyanin-containing compound metabolic process 4.84% (3/62) 3.6 0.001985 0.011477
GO:0048589 developmental growth 14.52% (9/62) 1.66 0.002028 0.011606
GO:0010557 positive regulation of macromolecule biosynthetic process 16.13% (10/62) 1.54 0.002021 0.011628
GO:0042325 regulation of phosphorylation 8.06% (5/62) 2.46 0.002148 0.012229
GO:0009719 response to endogenous stimulus 25.81% (16/62) 1.1 0.002182 0.012359
GO:0009790 embryo development 12.9% (8/62) 1.78 0.002215 0.012477
GO:1901348 positive regulation of secondary cell wall biogenesis 3.23% (2/62) 4.84 0.002243 0.01251
GO:1903340 positive regulation of cell wall organization or biogenesis 3.23% (2/62) 4.84 0.002243 0.01251
GO:0008610 lipid biosynthetic process 14.52% (9/62) 1.63 0.00226 0.012541
GO:0044262 cellular carbohydrate metabolic process 9.68% (6/62) 2.15 0.002324 0.012763
GO:0062012 regulation of small molecule metabolic process 9.68% (6/62) 2.15 0.002324 0.012763
GO:0009531 secondary cell wall 3.23% (2/62) 4.81 0.002345 0.012817
GO:0050794 regulation of cellular process 46.77% (29/62) 0.68 0.002519 0.013496
GO:0010565 regulation of cellular ketone metabolic process 8.06% (5/62) 2.41 0.00251 0.013513
GO:0006109 regulation of carbohydrate metabolic process 8.06% (5/62) 2.41 0.002492 0.013549
GO:0030154 cell differentiation 14.52% (9/62) 1.61 0.002504 0.01355
GO:0051252 regulation of RNA metabolic process 22.58% (14/62) 1.19 0.002549 0.013588
GO:0048317 seed morphogenesis 3.23% (2/62) 4.72 0.002664 0.014135
GO:0007275 multicellular organism development 17.74% (11/62) 1.39 0.002685 0.014176
GO:0090404 pollen tube tip 4.84% (3/62) 3.43 0.002793 0.014675
GO:0043436 oxoacid metabolic process 17.74% (11/62) 1.39 0.002822 0.014757
GO:0043229 intracellular organelle 58.06% (36/62) 0.54 0.002945 0.01533
GO:2000014 regulation of endosperm development 3.23% (2/62) 4.63 0.003002 0.015551
GO:0000493 box H/ACA snoRNP assembly 1.61% (1/62) 8.3 0.00317 0.016343
GO:0043226 organelle 58.06% (36/62) 0.53 0.003298 0.016925
GO:0035838 growing cell tip 4.84% (3/62) 3.33 0.003362 0.017171
GO:0090708 specification of plant organ axis polarity 3.23% (2/62) 4.52 0.003482 0.017703
GO:0034637 cellular carbohydrate biosynthetic process 6.45% (4/62) 2.65 0.003877 0.01953
GO:0051302 regulation of cell division 6.45% (4/62) 2.65 0.003877 0.01953
GO:0080060 integument development 3.23% (2/62) 4.39 0.00413 0.020705
GO:0006082 organic acid metabolic process 17.74% (11/62) 1.3 0.004329 0.021607
GO:0031325 positive regulation of cellular metabolic process 19.35% (12/62) 1.22 0.00444 0.022059
GO:0031127 alpha-(1,2)-fucosyltransferase activity 1.61% (1/62) 7.72 0.004751 0.022578
GO:0005458 GDP-mannose transmembrane transporter activity 1.61% (1/62) 7.72 0.004751 0.022578
GO:1990570 GDP-mannose transmembrane transport 1.61% (1/62) 7.72 0.004751 0.022578
GO:0003867 4-aminobutyrate transaminase activity 1.61% (1/62) 7.72 0.004751 0.022578
GO:0009447 putrescine catabolic process 1.61% (1/62) 7.72 0.004751 0.022578
GO:0034387 4-aminobutyrate:pyruvate transaminase activity 1.61% (1/62) 7.72 0.004751 0.022578
GO:0045303 diaminobutyrate-2-oxoglutarate transaminase activity 1.61% (1/62) 7.72 0.004751 0.022578
GO:0102351 gamma-aminobutyrate transaminase (glyoxylate dependent) activity 1.61% (1/62) 7.72 0.004751 0.022578
GO:0009909 regulation of flower development 8.06% (5/62) 2.19 0.004833 0.022868
GO:0044238 primary metabolic process 48.39% (30/62) 0.6 0.004868 0.022932
GO:0017145 stem cell division 3.23% (2/62) 4.3 0.004684 0.023064
GO:0044036 cell wall macromolecule metabolic process 6.45% (4/62) 2.57 0.004678 0.023134
GO:0010556 regulation of macromolecule biosynthetic process 22.58% (14/62) 1.08 0.004991 0.023313
GO:0009554 megasporogenesis 3.23% (2/62) 4.26 0.004974 0.023333
GO:0010199 organ boundary specification between lateral organs and the meristem 3.23% (2/62) 4.23 0.005122 0.023822
GO:0009311 oligosaccharide metabolic process 4.84% (3/62) 3.11 0.005145 0.023828
GO:0009737 response to abscisic acid 12.9% (8/62) 1.57 0.005187 0.02392
GO:2000067 regulation of root morphogenesis 3.23% (2/62) 4.21 0.005272 0.02421
GO:0051241 negative regulation of multicellular organismal process 9.68% (6/62) 1.9 0.005321 0.024332
GO:0009404 toxin metabolic process 4.84% (3/62) 3.08 0.005409 0.024634
GO:0019219 regulation of nucleobase-containing compound metabolic process 22.58% (14/62) 1.07 0.005444 0.024689
GO:0042440 pigment metabolic process 6.45% (4/62) 2.5 0.005582 0.025212
GO:0040007 growth 14.52% (9/62) 1.43 0.005798 0.02608
GO:0043170 macromolecule metabolic process 37.1% (23/62) 0.73 0.006059 0.02714
GO:0044281 small molecule metabolic process 20.97% (13/62) 1.1 0.006333 0.027911
GO:0047501 (+)-neomenthol dehydrogenase activity 1.61% (1/62) 7.3 0.00633 0.02801
GO:0004015 adenosylmethionine-8-amino-7-oxononanoate transaminase activity 1.61% (1/62) 7.3 0.00633 0.02801
GO:0042400 ectoine catabolic process 1.61% (1/62) 7.3 0.00633 0.02801
GO:0019220 regulation of phosphate metabolic process 8.06% (5/62) 2.08 0.006602 0.028979
GO:0044260 cellular macromolecule metabolic process 19.35% (12/62) 1.14 0.006967 0.030459
GO:0051174 regulation of phosphorus metabolic process 8.06% (5/62) 2.06 0.007049 0.030697
GO:0048653 anther development 4.84% (3/62) 2.92 0.007406 0.031993
GO:0033993 response to lipid 19.35% (12/62) 1.13 0.007404 0.032114
GO:0006259 DNA metabolic process 9.68% (6/62) 1.79 0.007594 0.032679
GO:0010093 specification of floral organ identity 3.23% (2/62) 3.93 0.007756 0.033245
GO:0042435 indole-containing compound biosynthetic process 4.84% (3/62) 2.89 0.007901 0.033733
GO:0009664 plant-type cell wall organization 6.45% (4/62) 2.35 0.008002 0.034031
GO:0048585 negative regulation of response to stimulus 14.52% (9/62) 1.35 0.00814 0.03435
GO:0090701 specification of plant organ identity 3.23% (2/62) 3.89 0.00812 0.034401
GO:0010411 xyloglucan metabolic process 3.23% (2/62) 3.86 0.008492 0.035699
GO:0044272 sulfur compound biosynthetic process 6.45% (4/62) 2.31 0.008802 0.03686
GO:0051781 positive regulation of cell division 3.23% (2/62) 3.81 0.009064 0.037811
GO:0071669 plant-type cell wall organization or biogenesis 8.06% (5/62) 1.96 0.009329 0.038771
GO:0031429 box H/ACA snoRNP complex 1.61% (1/62) 6.72 0.00948 0.038807
GO:0034513 box H/ACA snoRNA binding 1.61% (1/62) 6.72 0.00948 0.038807
GO:0072588 box H/ACA RNP complex 1.61% (1/62) 6.72 0.00948 0.038807
GO:0042399 ectoine metabolic process 1.61% (1/62) 6.72 0.00948 0.038807
GO:0042659 regulation of cell fate specification 3.23% (2/62) 3.75 0.009852 0.04018
GO:0065008 regulation of biological quality 22.58% (14/62) 0.97 0.009931 0.040203
GO:1905392 plant organ morphogenesis 8.06% (5/62) 1.94 0.009898 0.040216
GO:0098791 Golgi apparatus subcompartment 8.06% (5/62) 1.92 0.010339 0.041396
GO:1901363 heterocyclic compound binding 38.71% (24/62) 0.65 0.010384 0.041423
GO:0005575 cellular_component 75.81% (47/62) 0.31 0.010331 0.041513
GO:0097305 response to alcohol 12.9% (8/62) 1.4 0.010295 0.041521
GO:0051286 cell tip 4.84% (3/62) 2.73 0.010667 0.042398
GO:0031120 snRNA pseudouridine synthesis 1.61% (1/62) 6.49 0.011051 0.043765
GO:0097159 organic cyclic compound binding 38.71% (24/62) 0.64 0.011326 0.044692
GO:1900055 regulation of leaf senescence 4.84% (3/62) 2.69 0.011384 0.044757
GO:0010033 response to organic substance 30.65% (19/62) 0.75 0.011959 0.04685
GO:0060187 cell pole 4.84% (3/62) 2.66 0.012019 0.046919
GO:1901605 alpha-amino acid metabolic process 6.45% (4/62) 2.17 0.012083 0.046998
GO:0047037 salutaridine reductase (NADPH) activity 1.61% (1/62) 6.3 0.01262 0.048062
GO:0052581 (-)-isopiperitenone reductase activity 1.61% (1/62) 6.3 0.01262 0.048062
GO:0010265 SCF complex assembly 1.61% (1/62) 6.3 0.01262 0.048062
GO:0008417 fucosyltransferase activity 1.61% (1/62) 6.3 0.01262 0.048062
GO:0005975 carbohydrate metabolic process 11.29% (7/62) 1.48 0.012527 0.048553
GO:0010047 fruit dehiscence 3.23% (2/62) 3.56 0.012615 0.048721
GO:0030427 site of polarized growth 4.84% (3/62) 2.62 0.013011 0.049378
GO:0009944 polarity specification of adaxial/abaxial axis 3.23% (2/62) 3.53 0.013067 0.049418
GO:0044255 cellular lipid metabolic process 14.52% (9/62) 1.24 0.013167 0.049456
GO:0010604 positive regulation of macromolecule metabolic process 17.74% (11/62) 1.08 0.013156 0.049585
GO:0044283 small molecule biosynthetic process 11.29% (7/62) 1.46 0.013263 0.049646
GO:0042538 hyperosmotic salinity response 4.84% (3/62) 2.6 0.013351 0.049805
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_210 0.007 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_253 0.009 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_80 0.009 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_100 0.007 Orthogroups with 8 Potato genotypes Compare
Sequences (62) (download table)

InterPro Domains

GO Terms

Family Terms