Coexpression cluster: Cluster_16 (HCCA Clusters (HRR 50 & PCC 0.5))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0046785 microtubule polymerization 4.02% (7/174) 5.49 0.0 0.0
GO:0031109 microtubule polymerization or depolymerization 4.02% (7/174) 5.16 0.0 1e-06
GO:0051258 protein polymerization 4.02% (7/174) 4.37 0.0 4.4e-05
GO:0065003 protein-containing complex assembly 12.64% (22/174) 1.86 0.0 0.000125
GO:0022625 cytosolic large ribosomal subunit 5.17% (9/174) 3.32 0.0 0.000181
GO:0043933 protein-containing complex organization 13.22% (23/174) 1.72 1e-06 0.000224
GO:0044391 ribosomal subunit 6.32% (11/174) 2.65 2e-06 0.000456
GO:0002181 cytoplasmic translation 5.17% (9/174) 3.04 2e-06 0.000481
GO:0003735 structural constituent of ribosome 6.32% (11/174) 2.61 2e-06 0.000494
GO:0005198 structural molecule activity 7.47% (13/174) 2.32 3e-06 0.000497
GO:1990904 ribonucleoprotein complex 10.34% (18/174) 1.86 3e-06 0.000511
GO:0010090 trichome morphogenesis 4.02% (7/174) 3.57 2e-06 0.00052
GO:0022607 cellular component assembly 16.67% (29/174) 1.39 2e-06 0.000536
GO:0015934 large ribosomal subunit 5.17% (9/174) 3.06 2e-06 0.000559
GO:0006412 translation 6.32% (11/174) 2.41 8e-06 0.001429
GO:0042788 polysomal ribosome 4.6% (8/174) 2.95 1e-05 0.001638
GO:0043043 peptide biosynthetic process 6.32% (11/174) 2.33 1.5e-05 0.002171
GO:0022618 ribonucleoprotein complex assembly 5.17% (9/174) 2.59 2.1e-05 0.002978
GO:0071826 ribonucleoprotein complex subunit organization 5.17% (9/174) 2.51 3.3e-05 0.004435
GO:0051246 regulation of protein metabolic process 13.79% (24/174) 1.31 3.6e-05 0.004548
GO:0008017 microtubule binding 4.6% (8/174) 2.65 4.6e-05 0.005562
GO:0072375 medium-term memory 1.15% (2/174) 7.23 5.9e-05 0.006767
GO:0090630 activation of GTPase activity 1.72% (3/174) 5.07 9.3e-05 0.010266
GO:0042256 mature ribosome assembly 1.72% (3/174) 5.0 0.000109 0.011441
GO:0006417 regulation of translation 6.32% (11/174) 1.98 0.000126 0.012773
GO:0016410 N-acyltransferase activity 3.45% (6/174) 2.92 0.000154 0.014951
GO:0044271 cellular nitrogen compound biosynthetic process 12.07% (21/174) 1.28 0.00016 0.014965
GO:1901566 organonitrogen compound biosynthetic process 13.22% (23/174) 1.19 0.000186 0.016784
GO:0043604 amide biosynthetic process 6.32% (11/174) 1.9 0.000199 0.017372
GO:0015631 tubulin binding 4.6% (8/174) 2.34 0.000209 0.017601
GO:0034248 regulation of cellular amide metabolic process 6.32% (11/174) 1.88 0.000224 0.018244
GO:0005840 ribosome 5.17% (9/174) 2.11 0.000264 0.020231
GO:0000226 microtubule cytoskeleton organization 5.75% (10/174) 1.98 0.00026 0.020539
GO:0006518 peptide metabolic process 6.32% (11/174) 1.83 0.000313 0.022589
GO:0005622 intracellular anatomical structure 6.32% (11/174) 1.83 0.000313 0.022589
GO:0010608 post-transcriptional regulation of gene expression 6.9% (12/174) 1.7 0.000358 0.025117
GO:0008092 cytoskeletal protein binding 6.32% (11/174) 1.78 0.000421 0.025291
GO:0007010 cytoskeleton organization 6.9% (12/174) 1.68 0.000416 0.025606
GO:0055028 cortical microtubule 2.87% (5/174) 2.99 0.000438 0.025717
GO:1903754 cortical microtubule plus-end 1.15% (2/174) 6.0 0.000408 0.025748
GO:1904511 cytoplasmic microtubule plus-end 1.15% (2/174) 6.0 0.000408 0.025748
GO:2000112 regulation of cellular macromolecule biosynthetic process 6.9% (12/174) 1.69 0.000403 0.026765
GO:0016407 acetyltransferase activity 4.02% (7/174) 2.4 0.0004 0.027328
GO:0060582 cell fate determination involved in pattern specification 1.15% (2/174) 5.81 0.000542 0.031118
GO:0098556 cytoplasmic side of rough endoplasmic reticulum membrane 2.3% (4/174) 3.39 0.000606 0.034025
GO:0010468 regulation of gene expression 21.84% (38/174) 0.77 0.000632 0.034718
GO:0098554 cytoplasmic side of endoplasmic reticulum membrane 2.3% (4/174) 3.35 0.000661 0.035528
GO:0042273 ribosomal large subunit biogenesis 1.72% (3/174) 4.11 0.000704 0.036304
GO:1990403 embryonic brain development 1.15% (2/174) 5.64 0.000695 0.036567
GO:0007017 microtubule-based process 6.32% (11/174) 1.66 0.000827 0.039426
GO:0022613 ribonucleoprotein complex biogenesis 2.87% (5/174) 2.79 0.000821 0.039878
GO:0005881 cytoplasmic microtubule 2.87% (5/174) 2.8 0.000798 0.040337
GO:0006110 regulation of glycolytic process 1.72% (3/174) 4.04 0.000816 0.040421
GO:0090261 positive regulation of inclusion body assembly 1.15% (2/174) 5.49 0.000866 0.040511
GO:0051247 positive regulation of protein metabolic process 7.47% (13/174) 1.46 0.000981 0.045053
GO:0055057 neuroblast division 1.15% (2/174) 5.35 0.001055 0.046771
GO:0055059 asymmetric neuroblast division 1.15% (2/174) 5.35 0.001055 0.046771
GO:0016746 acyltransferase activity 5.75% (10/174) 1.71 0.001104 0.048094
GO:0034645 cellular macromolecule biosynthetic process 6.9% (12/174) 1.51 0.001132 0.048479
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_31 0.009 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_33 0.008 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_35 0.007 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_37 0.016 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_38 0.01 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_43 0.009 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_59 0.009 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_70 0.009 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_106 0.009 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_114 0.009 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_146 0.008 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_175 0.014 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_200 0.009 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_202 0.018 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_211 0.01 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_236 0.014 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_240 0.016 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_247 0.009 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_266 0.01 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_10 0.03 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_12 0.011 Orthogroups with 8 Potato genotypes Compare
Sequences (174) (download table)

InterPro Domains

GO Terms

Family Terms