Coexpression cluster: Cluster_27 (HCCA Clusters (HRR 50 & PCC 0.5))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0009532 plastid stroma 21.12% (34/161) 3.15 0.0 0.0
GO:0009570 chloroplast stroma 19.88% (32/161) 3.11 0.0 0.0
GO:0009657 plastid organization 15.53% (25/161) 3.42 0.0 0.0
GO:0042170 plastid membrane 16.77% (27/161) 2.96 0.0 0.0
GO:0009658 chloroplast organization 13.66% (22/161) 3.42 0.0 0.0
GO:0009536 plastid 24.22% (39/161) 2.04 0.0 0.0
GO:0009507 chloroplast 20.5% (33/161) 2.25 0.0 0.0
GO:0035639 purine ribonucleoside triphosphate binding 23.6% (38/161) 2.0 0.0 0.0
GO:0032555 purine ribonucleotide binding 23.6% (38/161) 1.9 0.0 0.0
GO:0017076 purine nucleotide binding 23.6% (38/161) 1.89 0.0 0.0
GO:1901363 heterocyclic compound binding 50.31% (81/161) 1.02 0.0 0.0
GO:0032553 ribonucleotide binding 23.6% (38/161) 1.86 0.0 0.0
GO:0043167 ion binding 41.61% (67/161) 1.2 0.0 0.0
GO:0097159 organic cyclic compound binding 50.31% (81/161) 1.01 0.0 0.0
GO:0005524 ATP binding 20.5% (33/161) 2.0 0.0 0.0
GO:0043168 anion binding 26.71% (43/161) 1.66 0.0 0.0
GO:0004812 aminoacyl-tRNA ligase activity 5.59% (9/161) 5.01 0.0 0.0
GO:0006418 tRNA aminoacylation for protein translation 5.59% (9/161) 5.01 0.0 0.0
GO:0016875 ligase activity, forming carbon-oxygen bonds 5.59% (9/161) 5.01 0.0 0.0
GO:0097367 carbohydrate derivative binding 23.6% (38/161) 1.77 0.0 0.0
GO:0043038 amino acid activation 5.59% (9/161) 4.92 0.0 0.0
GO:0043039 tRNA aminoacylation 5.59% (9/161) 4.92 0.0 0.0
GO:0036094 small molecule binding 30.43% (49/161) 1.44 0.0 0.0
GO:0032559 adenyl ribonucleotide binding 20.5% (33/161) 1.89 0.0 0.0
GO:0030554 adenyl nucleotide binding 20.5% (33/161) 1.89 0.0 0.0
GO:0034357 photosynthetic membrane 10.56% (17/161) 2.96 0.0 0.0
GO:0000166 nucleotide binding 27.95% (45/161) 1.46 0.0 0.0
GO:1901265 nucleoside phosphate binding 27.95% (45/161) 1.46 0.0 0.0
GO:0006996 organelle organization 23.6% (38/161) 1.6 0.0 0.0
GO:0031969 chloroplast membrane 8.7% (14/161) 3.18 0.0 0.0
GO:0042651 thylakoid membrane 9.94% (16/161) 2.89 0.0 0.0
GO:0003723 RNA binding 20.5% (33/161) 1.66 0.0 0.0
GO:0003729 mRNA binding 16.15% (26/161) 1.92 0.0 0.0
GO:0110165 cellular anatomical entity 81.37% (131/161) 0.44 0.0 0.0
GO:0006139 nucleobase-containing compound metabolic process 26.09% (42/161) 1.37 0.0 0.0
GO:0016043 cellular component organization 34.78% (56/161) 1.09 0.0 1e-06
GO:0034641 cellular nitrogen compound metabolic process 31.06% (50/161) 1.19 0.0 1e-06
GO:0030388 fructose 1,6-bisphosphate metabolic process 3.11% (5/161) 6.0 0.0 1e-06
GO:0006399 tRNA metabolic process 8.07% (13/161) 2.99 0.0 1e-06
GO:0005575 cellular_component 81.37% (131/161) 0.41 0.0 1e-06
GO:0046483 heterocycle metabolic process 29.81% (48/161) 1.18 0.0 2e-06
GO:0003674 molecular_function 80.12% (129/161) 0.42 0.0 2e-06
GO:0006094 gluconeogenesis 3.73% (6/161) 5.02 0.0 2e-06
GO:0009987 cellular process 73.29% (118/161) 0.49 0.0 2e-06
GO:0044237 cellular metabolic process 54.66% (88/161) 0.69 0.0 3e-06
GO:0005986 sucrose biosynthetic process 3.11% (5/161) 5.6 0.0 3e-06
GO:0031968 organelle outer membrane 6.21% (10/161) 3.36 0.0 3e-06
GO:0019867 outer membrane 6.21% (10/161) 3.34 0.0 4e-06
GO:0071840 cellular component organization or biogenesis 34.78% (56/161) 1.0 0.0 4e-06
GO:0016070 RNA metabolic process 18.01% (29/161) 1.59 0.0 5e-06
GO:0016874 ligase activity 6.83% (11/161) 3.07 0.0 5e-06
GO:0019319 hexose biosynthetic process 3.73% (6/161) 4.73 0.0 5e-06
GO:0008150 biological_process 80.75% (130/161) 0.39 0.0 5e-06
GO:0008152 metabolic process 60.25% (97/161) 0.6 0.0 5e-06
GO:0009535 chloroplast thylakoid membrane 8.07% (13/161) 2.67 0.0 8e-06
GO:0055035 plastid thylakoid membrane 8.07% (13/161) 2.66 0.0 8e-06
GO:0044281 small molecule metabolic process 23.6% (38/161) 1.27 0.0 1.1e-05
GO:1901360 organic cyclic compound metabolic process 32.92% (53/161) 1.0 0.0 1.1e-05
GO:0006725 cellular aromatic compound metabolic process 30.43% (49/161) 1.01 1e-06 2.7e-05
GO:0008728 GTP diphosphokinase activity 1.86% (3/161) 7.19 1e-06 2.9e-05
GO:0031093 platelet alpha granule lumen 1.86% (3/161) 7.19 1e-06 2.9e-05
GO:0005739 mitochondrion 15.53% (25/161) 1.6 1e-06 3.2e-05
GO:0010027 thylakoid membrane organization 3.73% (6/161) 4.19 1e-06 4.3e-05
GO:0005741 mitochondrial outer membrane 4.35% (7/161) 3.73 1e-06 4.4e-05
GO:0015969 guanosine tetraphosphate metabolic process 1.86% (3/161) 6.92 1e-06 5.4e-05
GO:0006006 glucose metabolic process 3.73% (6/161) 4.1 1e-06 5.8e-05
GO:0071704 organic substance metabolic process 55.28% (89/161) 0.58 2e-06 6.9e-05
GO:0140101 catalytic activity, acting on a tRNA 5.59% (9/161) 3.02 2e-06 7.4e-05
GO:0070061 fructose binding 1.86% (3/161) 6.7 2e-06 8.9e-05
GO:0009668 plastid membrane organization 3.73% (6/161) 3.97 3e-06 9e-05
GO:0019750 chloroplast localization 3.73% (6/161) 3.97 3e-06 9e-05
GO:0051644 plastid localization 3.73% (6/161) 3.97 3e-06 9e-05
GO:0046872 metal ion binding 23.6% (38/161) 1.13 3e-06 9.5e-05
GO:0051536 iron-sulfur cluster binding 4.97% (8/161) 3.2 3e-06 0.0001
GO:0051540 metal cluster binding 4.97% (8/161) 3.2 3e-06 0.0001
GO:0044238 primary metabolic process 49.07% (79/161) 0.62 4e-06 0.000137
GO:0005488 binding 67.7% (109/161) 0.44 4e-06 0.000143
GO:0043169 cation binding 23.6% (38/161) 1.09 5e-06 0.000153
GO:0046351 disaccharide biosynthetic process 3.11% (5/161) 4.31 6e-06 0.000179
GO:0046364 monosaccharide biosynthetic process 3.73% (6/161) 3.77 6e-06 0.000181
GO:0035686 sperm fibrous sheath 1.86% (3/161) 6.34 6e-06 0.000182
GO:0005525 GTP binding 5.59% (9/161) 2.82 6e-06 0.000188
GO:0090304 nucleic acid metabolic process 19.25% (31/161) 1.22 7e-06 0.000231
GO:0003676 nucleic acid binding 27.95% (45/161) 0.94 8e-06 0.00024
GO:0042181 ketone biosynthetic process 3.73% (6/161) 3.68 8e-06 0.000241
GO:0042372 phylloquinone biosynthetic process 1.86% (3/161) 6.19 8e-06 0.000242
GO:0034035 purine ribonucleoside bisphosphate metabolic process 1.86% (3/161) 6.19 8e-06 0.000242
GO:0006807 nitrogen compound metabolic process 44.1% (71/161) 0.66 8e-06 0.000243
GO:0106074 aminoacyl-tRNA metabolism involved in translational fidelity 1.86% (3/161) 6.05 1.1e-05 0.000291
GO:0042371 vitamin K biosynthetic process 1.86% (3/161) 6.05 1.1e-05 0.000291
GO:0010343 singlet oxygen-mediated programmed cell death 1.86% (3/161) 6.05 1.1e-05 0.000291
GO:0004332 fructose-bisphosphate aldolase activity 1.86% (3/161) 6.05 1.1e-05 0.000291
GO:0019242 methylglyoxal biosynthetic process 1.86% (3/161) 6.05 1.1e-05 0.000291
GO:0034316 negative regulation of Arp2/3 complex-mediated actin nucleation 1.86% (3/161) 6.05 1.1e-05 0.000291
GO:0051126 negative regulation of actin nucleation 1.86% (3/161) 6.05 1.1e-05 0.000291
GO:0042548 regulation of photosynthesis, light reaction 3.11% (5/161) 4.14 1e-05 0.000293
GO:0043231 intracellular membrane-bounded organelle 51.55% (83/161) 0.56 1.1e-05 0.000302
GO:0031090 organelle membrane 25.47% (41/161) 0.99 1.1e-05 0.000302
GO:0032561 guanyl ribonucleotide binding 5.59% (9/161) 2.69 1.2e-05 0.000319
GO:0019001 guanyl nucleotide binding 5.59% (9/161) 2.68 1.3e-05 0.000339
GO:0006397 mRNA processing 6.83% (11/161) 2.33 1.4e-05 0.000363
GO:0042374 phylloquinone metabolic process 1.86% (3/161) 5.92 1.5e-05 0.000367
GO:0061827 sperm head 1.86% (3/161) 5.92 1.5e-05 0.000367
GO:0043227 membrane-bounded organelle 51.55% (83/161) 0.55 1.7e-05 0.000418
GO:0046716 muscle cell cellular homeostasis 1.86% (3/161) 5.81 1.9e-05 0.000467
GO:0009314 response to radiation 18.01% (29/161) 1.21 1.9e-05 0.000472
GO:0009416 response to light stimulus 17.39% (28/161) 1.22 2.3e-05 0.000545
GO:0009312 oligosaccharide biosynthetic process 3.11% (5/161) 3.89 2.4e-05 0.000562
GO:0016778 diphosphotransferase activity 1.86% (3/161) 5.7 2.4e-05 0.000571
GO:0042373 vitamin K metabolic process 1.86% (3/161) 5.6 3e-05 0.000699
GO:0009579 thylakoid 4.97% (8/161) 2.74 3e-05 0.000705
GO:0009117 nucleotide metabolic process 7.45% (12/161) 2.07 3.4e-05 0.000772
GO:0140098 catalytic activity, acting on RNA 7.45% (12/161) 2.06 3.6e-05 0.000817
GO:0034660 ncRNA metabolic process 9.32% (15/161) 1.78 3.7e-05 0.000819
GO:0009543 chloroplast thylakoid lumen 2.48% (4/161) 4.43 3.6e-05 0.000819
GO:0031978 plastid thylakoid lumen 2.48% (4/161) 4.43 3.6e-05 0.000819
GO:0035094 response to nicotine 1.86% (3/161) 5.51 3.7e-05 0.000821
GO:0006753 nucleoside phosphate metabolic process 7.45% (12/161) 2.04 4e-05 0.000865
GO:0010608 post-transcriptional regulation of gene expression 8.07% (13/161) 1.93 4.2e-05 0.000907
GO:0016830 carbon-carbon lyase activity 4.35% (7/161) 2.92 4.3e-05 0.000917
GO:0006936 muscle contraction 2.48% (4/161) 4.37 4.3e-05 0.000918
GO:0043489 RNA stabilization 3.11% (5/161) 3.68 4.8e-05 0.001011
GO:1990229 iron-sulfur cluster assembly complex 1.24% (2/161) 7.34 5e-05 0.00104
GO:0062157 mitochondrial ATP-gated potassium channel complex 1.24% (2/161) 7.34 5e-05 0.00104
GO:0019150 D-ribulokinase activity 1.24% (2/161) 7.34 5e-05 0.00104
GO:0044271 cellular nitrogen compound biosynthetic process 13.04% (21/161) 1.39 5.2e-05 0.001065
GO:0006002 fructose 6-phosphate metabolic process 1.86% (3/161) 5.34 5.3e-05 0.001086
GO:0009150 purine ribonucleotide metabolic process 5.59% (9/161) 2.38 6.8e-05 0.001363
GO:0030018 Z disc 2.48% (4/161) 4.2 6.9e-05 0.001386
GO:0002161 aminoacyl-tRNA editing activity 1.86% (3/161) 5.19 7.4e-05 0.001473
GO:1902369 negative regulation of RNA catabolic process 3.11% (5/161) 3.53 7.7e-05 0.001519
GO:0005985 sucrose metabolic process 3.11% (5/161) 3.52 8.1e-05 0.001577
GO:0042180 cellular ketone metabolic process 3.73% (6/161) 3.08 8.3e-05 0.001616
GO:0140640 catalytic activity, acting on a nucleic acid 8.7% (14/161) 1.75 8.5e-05 0.001632
GO:0032544 plastid translation 1.86% (3/161) 5.12 8.6e-05 0.001637
GO:1903830 magnesium ion transmembrane transport 1.86% (3/161) 5.12 8.6e-05 0.001637
GO:0006520 cellular amino acid metabolic process 7.45% (12/161) 1.92 8.9e-05 0.001677
GO:0031966 mitochondrial membrane 4.97% (8/161) 2.51 9.3e-05 0.00174
GO:0006163 purine nucleotide metabolic process 5.59% (9/161) 2.31 9.5e-05 0.001755
GO:0007339 binding of sperm to zona pellucida 1.86% (3/161) 5.05 0.0001 0.001823
GO:0035036 sperm-egg recognition 1.86% (3/161) 5.05 0.0001 0.001823
GO:0034315 regulation of Arp2/3 complex-mediated actin nucleation 1.86% (3/161) 4.98 0.000114 0.002061
GO:0051125 regulation of actin nucleation 1.86% (3/161) 4.98 0.000114 0.002061
GO:0009259 ribonucleotide metabolic process 5.59% (9/161) 2.26 0.000124 0.002216
GO:0006000 fructose metabolic process 1.86% (3/161) 4.92 0.00013 0.0023
GO:0050308 sugar-phosphatase activity 1.86% (3/161) 4.92 0.00013 0.0023
GO:0043226 organelle 54.66% (88/161) 0.44 0.000138 0.002421
GO:0019318 hexose metabolic process 3.73% (6/161) 2.95 0.00014 0.002433
GO:0019693 ribose phosphate metabolic process 5.59% (9/161) 2.23 0.000148 0.002542
GO:0055086 nucleobase-containing small molecule metabolic process 7.45% (12/161) 1.84 0.000148 0.002558
GO:0010109 regulation of photosynthesis 3.11% (5/161) 3.31 0.000157 0.002674
GO:0003012 muscle system process 2.48% (4/161) 3.88 0.000164 0.002778
GO:0009438 methylglyoxal metabolic process 1.86% (3/161) 4.75 0.000187 0.003123
GO:0009988 cell-cell recognition 1.86% (3/161) 4.75 0.000187 0.003123
GO:0043229 intracellular organelle 54.04% (87/161) 0.44 0.000201 0.003348
GO:0009526 plastid envelope 7.45% (12/161) 1.79 0.000206 0.003408
GO:0019253 reductive pentose-phosphate cycle 1.86% (3/161) 4.7 0.000208 0.00342
GO:0019637 organophosphate metabolic process 9.32% (15/161) 1.55 0.000212 0.003454
GO:0010117 photoprotection 1.86% (3/161) 4.65 0.000232 0.003732
GO:0003824 catalytic activity 46.58% (75/161) 0.5 0.000231 0.00375
GO:1904821 chloroplast disassembly 1.24% (2/161) 6.34 0.00025 0.004006
GO:0042362 fat-soluble vitamin biosynthetic process 1.86% (3/161) 4.55 0.000283 0.00448
GO:0051537 2 iron, 2 sulfur cluster binding 2.48% (4/161) 3.68 0.000282 0.004494
GO:1901576 organic substance biosynthetic process 25.47% (41/161) 0.78 0.000303 0.004768
GO:0098573 intrinsic component of mitochondrial membrane 2.48% (4/161) 3.64 0.000312 0.004845
GO:0015095 magnesium ion transmembrane transporter activity 1.86% (3/161) 4.51 0.000312 0.004868
GO:0043467 regulation of generation of precursor metabolites and energy 3.73% (6/161) 2.73 0.000317 0.004888
GO:0031977 thylakoid lumen 2.48% (4/161) 3.6 0.000344 0.005243
GO:0006450 regulation of translational fidelity 1.86% (3/161) 4.46 0.000342 0.005244
GO:0042549 photosystem II stabilization 1.24% (2/161) 6.12 0.000349 0.005297
GO:0019685 photosynthesis, dark reaction 1.86% (3/161) 4.42 0.000374 0.005568
GO:0046835 carbohydrate phosphorylation 1.86% (3/161) 4.42 0.000374 0.005568
GO:0009534 chloroplast thylakoid 3.11% (5/161) 3.05 0.000372 0.005601
GO:0031976 plastid thylakoid 3.11% (5/161) 3.03 0.000395 0.005856
GO:0009649 entrainment of circadian clock 1.86% (3/161) 4.38 0.000407 0.006002
GO:0005984 disaccharide metabolic process 3.11% (5/161) 2.99 0.000446 0.006535
GO:0009902 chloroplast relocation 2.48% (4/161) 3.5 0.000453 0.006557
GO:0051667 establishment of plastid localization 2.48% (4/161) 3.5 0.000453 0.006557
GO:0042132 fructose 1,6-bisphosphate 1-phosphatase activity 1.24% (2/161) 5.92 0.000464 0.006652
GO:0072521 purine-containing compound metabolic process 5.59% (9/161) 2.0 0.000464 0.006683
GO:0019200 carbohydrate kinase activity 1.86% (3/161) 4.3 0.000481 0.00681
GO:0015693 magnesium ion transport 1.86% (3/161) 4.3 0.000481 0.00681
GO:0009941 chloroplast envelope 6.83% (11/161) 1.74 0.000501 0.00706
GO:0034654 nucleobase-containing compound biosynthetic process 6.83% (11/161) 1.74 0.000512 0.007169
GO:0009152 purine ribonucleotide biosynthetic process 3.11% (5/161) 2.94 0.000516 0.007197
GO:0048029 monosaccharide binding 2.48% (4/161) 3.4 0.000584 0.008101
GO:0006396 RNA processing 10.56% (17/161) 1.29 0.000638 0.008797
GO:0006164 purine nucleotide biosynthetic process 3.11% (5/161) 2.85 0.000682 0.00935
GO:0007005 mitochondrion organization 3.73% (6/161) 2.51 0.000689 0.0094
GO:0005996 monosaccharide metabolic process 3.73% (6/161) 2.5 0.000718 0.009738
GO:0006941 striated muscle contraction 1.86% (3/161) 4.08 0.00075 0.009814
GO:0009628 response to abiotic stimulus 29.81% (48/161) 0.64 0.000747 0.009821
GO:0044249 cellular biosynthetic process 23.6% (38/161) 0.75 0.000745 0.009845
GO:0016987 sigma factor activity 1.24% (2/161) 5.6 0.000742 0.009866
GO:0034705 potassium channel complex 1.24% (2/161) 5.6 0.000742 0.009866
GO:0031967 organelle envelope 8.07% (13/161) 1.51 0.000738 0.00991
GO:0031975 envelope 8.07% (13/161) 1.51 0.000738 0.00991
GO:0006775 fat-soluble vitamin metabolic process 1.86% (3/161) 4.05 0.000802 0.010448
GO:0051494 negative regulation of cytoskeleton organization 2.48% (4/161) 3.27 0.00083 0.010697
GO:1902904 negative regulation of supramolecular fiber organization 2.48% (4/161) 3.27 0.00083 0.010697
GO:0009903 chloroplast avoidance movement 1.86% (3/161) 4.02 0.000857 0.010939
GO:0019203 carbohydrate phosphatase activity 1.86% (3/161) 4.02 0.000857 0.010939
GO:0016787 hydrolase activity 18.63% (30/161) 0.86 0.000908 0.01142
GO:1901663 quinone biosynthetic process 1.86% (3/161) 3.98 0.000914 0.011441
GO:0009058 biosynthetic process 25.47% (41/161) 0.7 0.000908 0.011473
GO:0010239 chloroplast mRNA processing 1.24% (2/161) 5.46 0.000905 0.011493
GO:0042626 ATPase-coupled transmembrane transporter activity 3.73% (6/161) 2.43 0.000926 0.011538
GO:0009165 nucleotide biosynthetic process 3.73% (6/161) 2.43 0.000944 0.011703
GO:0044283 small molecule biosynthetic process 9.94% (16/161) 1.28 0.001002 0.012357
GO:1901293 nucleoside phosphate biosynthetic process 3.73% (6/161) 2.4 0.001037 0.012613
GO:0031154 culmination involved in sorocarp development 1.86% (3/161) 3.92 0.001035 0.01265
GO:0043627 response to estrogen 1.86% (3/161) 3.92 0.001035 0.01265
GO:0015440 ABC-type peptide transporter activity 1.24% (2/161) 5.34 0.001083 0.013108
GO:0006754 ATP biosynthetic process 1.86% (3/161) 3.89 0.0011 0.013246
GO:0009260 ribonucleotide biosynthetic process 3.11% (5/161) 2.69 0.001128 0.013522
GO:0007623 circadian rhythm 5.59% (9/161) 1.81 0.001201 0.014331
GO:0036473 cell death in response to oxidative stress 1.86% (3/161) 3.84 0.001235 0.014609
GO:0097468 programmed cell death in response to reactive oxygen species 1.86% (3/161) 3.84 0.001235 0.014609
GO:0061024 membrane organization 5.59% (9/161) 1.79 0.001282 0.014892
GO:0016311 dephosphorylation 4.35% (7/161) 2.11 0.001278 0.014905
GO:0009842 cyanelle 1.24% (2/161) 5.22 0.001276 0.014958
GO:0009533 chloroplast stromal thylakoid 1.24% (2/161) 5.22 0.001276 0.014958
GO:0051289 protein homotetramerization 2.48% (4/161) 3.09 0.001301 0.015045
GO:0051539 4 iron, 4 sulfur cluster binding 2.48% (4/161) 3.07 0.001388 0.015829
GO:0110053 regulation of actin filament organization 2.48% (4/161) 3.07 0.001388 0.015829
GO:0046390 ribose phosphate biosynthetic process 3.11% (5/161) 2.62 0.001387 0.01596
GO:1901661 quinone metabolic process 1.86% (3/161) 3.75 0.001458 0.016561
GO:0006739 NADP metabolic process 1.86% (3/161) 3.73 0.001538 0.017387
GO:1902903 regulation of supramolecular fiber organization 3.11% (5/161) 2.59 0.001548 0.01743
GO:0090079 translation regulator activity, nucleic acid binding 3.11% (5/161) 2.58 0.001582 0.017734
GO:0060249 anatomical structure homeostasis 2.48% (4/161) 3.0 0.00162 0.018085
GO:0010960 magnesium ion homeostasis 1.24% (2/161) 5.02 0.001709 0.018991
GO:0009206 purine ribonucleoside triphosphate biosynthetic process 1.86% (3/161) 3.65 0.001792 0.019831
GO:0009853 photorespiration 1.86% (3/161) 3.63 0.001883 0.020742
GO:0016725 oxidoreductase activity, acting on CH or CH2 groups 1.24% (2/161) 4.92 0.001948 0.021369
GO:0009145 purine nucleoside triphosphate biosynthetic process 1.86% (3/161) 3.6 0.001976 0.021583
GO:0016832 aldehyde-lyase activity 1.86% (3/161) 3.58 0.002072 0.022536
GO:0016226 iron-sulfur cluster assembly 1.86% (3/161) 3.55 0.002171 0.023316
GO:0031163 metallo-sulfur cluster assembly 1.86% (3/161) 3.55 0.002171 0.023316
GO:0006796 phosphate-containing compound metabolic process 15.53% (25/161) 0.88 0.002168 0.023482
GO:0009311 oligosaccharide metabolic process 3.11% (5/161) 2.47 0.002202 0.023555
GO:0048511 rhythmic process 5.59% (9/161) 1.67 0.002282 0.024206
GO:0019725 cellular homeostasis 6.21% (10/161) 1.56 0.002281 0.024298
GO:0031930 mitochondria-nucleus signaling pathway 1.86% (3/161) 3.49 0.002484 0.02625
GO:0043487 regulation of RNA stability 3.11% (5/161) 2.43 0.002522 0.026434
GO:0005622 intracellular anatomical structure 5.59% (9/161) 1.65 0.002512 0.026435
GO:0016071 mRNA metabolic process 6.83% (11/161) 1.45 0.002553 0.026651
GO:0048255 mRNA stabilization 1.86% (3/161) 3.46 0.002595 0.026867
GO:0019752 carboxylic acid metabolic process 11.8% (19/161) 1.02 0.00259 0.026922
GO:0006793 phosphorus metabolic process 15.53% (25/161) 0.86 0.002725 0.027983
GO:0072507 divalent inorganic cation homeostasis 3.11% (5/161) 2.4 0.00272 0.028048
GO:0055085 transmembrane transport 9.32% (15/161) 1.18 0.002788 0.028524
GO:0140657 ATP-dependent activity 6.21% (10/161) 1.5 0.00307 0.031035
GO:0032592 integral component of mitochondrial membrane 1.86% (3/161) 3.38 0.003067 0.031131
GO:0046184 aldehyde biosynthetic process 1.86% (3/161) 3.38 0.003067 0.031131
GO:0009110 vitamin biosynthetic process 2.48% (4/161) 2.74 0.003123 0.031449
GO:0009201 ribonucleoside triphosphate biosynthetic process 1.86% (3/161) 3.36 0.003193 0.032028
GO:0019899 enzyme binding 11.18% (18/161) 1.03 0.003281 0.032663
GO:0140359 ABC-type transporter activity 2.48% (4/161) 2.72 0.00328 0.032774
GO:0031323 regulation of cellular metabolic process 24.84% (40/161) 0.61 0.003521 0.034908
GO:0046428 1,4-dihydroxy-2-naphthoate octaprenyltransferase activity 0.62% (1/161) 7.92 0.004119 0.034929
GO:0008996 ribonuclease G activity 0.62% (1/161) 7.92 0.004119 0.034929
GO:1902280 regulation of RNA helicase activity 0.62% (1/161) 7.92 0.004119 0.034929
GO:1990061 bacterial degradosome 0.62% (1/161) 7.92 0.004119 0.034929
GO:0004355 glutamate synthase (NADPH) activity 0.62% (1/161) 7.92 0.004119 0.034929
GO:1901918 negative regulation of exoribonuclease activity 0.62% (1/161) 7.92 0.004119 0.034929
GO:0070894 regulation of transposon integration 0.62% (1/161) 7.92 0.004119 0.034929
GO:0008935 1,4-dihydroxy-2-naphthoyl-CoA synthase activity 0.62% (1/161) 7.92 0.004119 0.034929
GO:0009673 low-affinity phosphate transmembrane transporter activity 0.62% (1/161) 7.92 0.004119 0.034929
GO:0050278 sedoheptulose-bisphosphatase activity 0.62% (1/161) 7.92 0.004119 0.034929
GO:0008273 calcium, potassium:sodium antiporter activity 0.62% (1/161) 7.92 0.004119 0.034929
GO:0014829 vascular associated smooth muscle contraction 0.62% (1/161) 7.92 0.004119 0.034929
GO:0035050 embryonic heart tube development 0.62% (1/161) 7.92 0.004119 0.034929
GO:0036376 sodium ion export across plasma membrane 0.62% (1/161) 7.92 0.004119 0.034929
GO:0044557 relaxation of smooth muscle 0.62% (1/161) 7.92 0.004119 0.034929
GO:0051481 negative regulation of cytosolic calcium ion concentration 0.62% (1/161) 7.92 0.004119 0.034929
GO:0098703 calcium ion import across plasma membrane 0.62% (1/161) 7.92 0.004119 0.034929
GO:0099580 ion antiporter activity involved in regulation of postsynaptic membrane potential 0.62% (1/161) 7.92 0.004119 0.034929
GO:0099608 regulation of action potential firing pattern 0.62% (1/161) 7.92 0.004119 0.034929
GO:1905060 calcium:cation antiporter activity involved in regulation of postsynaptic cytosolic calcium ion concentration 0.62% (1/161) 7.92 0.004119 0.034929
GO:0017020 myosin phosphatase regulator activity 0.62% (1/161) 7.92 0.004119 0.034929
GO:0018786 haloalkane dehalogenase activity 0.62% (1/161) 7.92 0.004119 0.034929
GO:0033354 chlorophyll cycle 0.62% (1/161) 7.92 0.004119 0.034929
GO:0090415 7-hydroxymethyl chlorophyll a reductase activity 0.62% (1/161) 7.92 0.004119 0.034929
GO:0060917 regulation of (1->6)-beta-D-glucan biosynthetic process 0.62% (1/161) 7.92 0.004119 0.034929
GO:0046977 TAP binding 0.62% (1/161) 7.92 0.004119 0.034929
GO:0004760 serine-pyruvate transaminase activity 0.62% (1/161) 7.92 0.004119 0.034929
GO:0047303 glycine-oxaloacetate transaminase activity 0.62% (1/161) 7.92 0.004119 0.034929
GO:0050281 serine-glyoxylate transaminase activity 0.62% (1/161) 7.92 0.004119 0.034929
GO:0000049 tRNA binding 1.86% (3/161) 3.3 0.003589 0.035449
GO:0031330 negative regulation of cellular catabolic process 3.11% (5/161) 2.3 0.003624 0.035655
GO:0050660 flavin adenine dinucleotide binding 2.48% (4/161) 2.62 0.00424 0.035839
GO:0031983 vesicle lumen 1.86% (3/161) 3.28 0.003727 0.035854
GO:0034774 secretory granule lumen 1.86% (3/161) 3.28 0.003727 0.035854
GO:0060205 cytoplasmic vesicle lumen 1.86% (3/161) 3.28 0.003727 0.035854
GO:0032543 mitochondrial translation 1.24% (2/161) 4.46 0.003689 0.035892
GO:0031138 negative regulation of conjugation with cellular fusion 1.24% (2/161) 4.46 0.003689 0.035892
GO:0072522 purine-containing compound biosynthetic process 3.11% (5/161) 2.3 0.003686 0.036135
GO:0010196 nonphotochemical quenching 1.24% (2/161) 4.34 0.004385 0.036228
GO:1990066 energy quenching 1.24% (2/161) 4.34 0.004385 0.036228
GO:0000178 exosome (RNase complex) 1.24% (2/161) 4.34 0.004385 0.036228
GO:1905354 exoribonuclease complex 1.24% (2/161) 4.34 0.004385 0.036228
GO:0009643 photosynthetic acclimation 1.24% (2/161) 4.34 0.004385 0.036228
GO:0070063 RNA polymerase binding 1.86% (3/161) 3.2 0.004313 0.036337
GO:0022857 transmembrane transporter activity 9.32% (15/161) 1.11 0.004365 0.036657
GO:1901564 organonitrogen compound metabolic process 31.06% (50/161) 0.51 0.003854 0.036931
GO:1902373 negative regulation of mRNA catabolic process 1.86% (3/161) 3.26 0.003869 0.03694
GO:0000086 G2/M transition of mitotic cell cycle 1.24% (2/161) 4.4 0.00403 0.037779
GO:1901529 positive regulation of anion channel activity 1.24% (2/161) 4.4 0.00403 0.037779
GO:1903961 positive regulation of anion transmembrane transport 1.24% (2/161) 4.4 0.00403 0.037779
GO:0043170 macromolecule metabolic process 31.68% (51/161) 0.5 0.003986 0.037922
GO:0015399 primary active transmembrane transporter activity 3.73% (6/161) 2.01 0.004013 0.038034
GO:0051262 protein tetramerization 2.48% (4/161) 2.58 0.004632 0.038148
GO:0008494 translation activator activity 1.24% (2/161) 4.28 0.004753 0.038775
GO:0034703 cation channel complex 1.24% (2/161) 4.28 0.004753 0.038775
GO:0010206 photosystem II repair 1.24% (2/161) 4.28 0.004753 0.038775
GO:0010359 regulation of anion channel activity 2.48% (4/161) 2.57 0.004836 0.039207
GO:0046034 ATP metabolic process 2.48% (4/161) 2.57 0.004836 0.039207
GO:0006875 cellular metal ion homeostasis 3.73% (6/161) 1.95 0.004878 0.039301
GO:0051259 protein complex oligomerization 3.73% (6/161) 1.95 0.004878 0.039301
GO:0016462 pyrophosphatase activity 4.35% (7/161) 1.75 0.005063 0.040664
GO:0055065 metal ion homeostasis 4.97% (8/161) 1.61 0.005084 0.0407
GO:0044839 cell cycle G2/M phase transition 1.24% (2/161) 4.22 0.005135 0.040734
GO:1903793 positive regulation of anion transport 1.24% (2/161) 4.22 0.005135 0.040734
GO:0009528 plastid inner membrane 2.48% (4/161) 2.54 0.005154 0.040761
GO:0009142 nucleoside triphosphate biosynthetic process 1.86% (3/161) 3.12 0.00512 0.040863
GO:0034059 response to anoxia 1.86% (3/161) 3.1 0.005291 0.041715
GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 4.35% (7/161) 1.73 0.005449 0.04283
GO:0070062 extracellular exosome 1.86% (3/161) 3.08 0.005466 0.042831
GO:0003924 GTPase activity 3.11% (5/161) 2.15 0.005608 0.04381
GO:1903959 regulation of anion transmembrane transport 2.48% (4/161) 2.5 0.005715 0.044513
GO:0006082 organic acid metabolic process 13.04% (21/161) 0.86 0.005813 0.045137
GO:0042726 flavin-containing compound metabolic process 1.24% (2/161) 4.12 0.00594 0.04599
GO:0072655 establishment of protein localization to mitochondrion 1.86% (3/161) 3.03 0.006011 0.0464
GO:0009205 purine ribonucleoside triphosphate metabolic process 2.48% (4/161) 2.47 0.006071 0.046716
GO:0017111 ribonucleoside triphosphate phosphatase activity 3.73% (6/161) 1.88 0.006163 0.047284
GO:0045182 translation regulator activity 3.11% (5/161) 2.11 0.006319 0.048341
GO:0002020 protease binding 1.86% (3/161) 3.0 0.006392 0.048756
GO:0070585 protein localization to mitochondrion 1.86% (3/161) 2.98 0.006588 0.049662
GO:0006096 glycolytic process 1.86% (3/161) 2.98 0.006588 0.049662
GO:0006757 ATP generation from ADP 1.86% (3/161) 2.98 0.006588 0.049662
GO:0016817 hydrolase activity, acting on acid anhydrides 4.35% (7/161) 1.68 0.006608 0.049669
GO:0043436 oxoacid metabolic process 12.42% (20/161) 0.87 0.006562 0.049903
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_88 0.009 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_177 0.008 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_227 0.007 Orthogroups with 8 Potato genotypes Compare
Sequences (161) (download table)

InterPro Domains

GO Terms

Family Terms