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  5. SOLTUB.AGRIA.G00000011213

SOLTUB.AGRIA.G00000011213


Description : Nadh dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial


Gene families : OG_02_0032301 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000011213
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_217


Type GO Term Name Evidence Source
CC GO:0005747 mitochondrial respiratory chain complex I IEA AHRD
BP GO:0006120 mitochondrial electron transport, NADH to ubiquinone IEA AHRD
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Type GO Term Name Evidence Source
BP GO:0000082 G1/S transition of mitotic cell cycle IEP Predict GO terms from Neighborhoods
CC GO:0000152 nuclear ubiquitin ligase complex IEP Predict GO terms from Neighborhoods
CC GO:0000153 cytoplasmic ubiquitin ligase complex IEP Predict GO terms from Neighborhoods
BP GO:0000578 embryonic axis specification IEP Predict GO terms from Neighborhoods
MF GO:0004520 endodeoxyribonuclease activity IEP Predict GO terms from Neighborhoods
MF GO:0004536 deoxyribonuclease activity IEP Predict GO terms from Neighborhoods
CC GO:0005680 anaphase-promoting complex IEP Predict GO terms from Neighborhoods
CC GO:0005682 U5 snRNP IEP Predict GO terms from Neighborhoods
CC GO:0005685 U1 snRNP IEP Predict GO terms from Neighborhoods
CC GO:0005688 U6 snRNP IEP Predict GO terms from Neighborhoods
CC GO:0005689 U12-type spliceosomal complex IEP Predict GO terms from Neighborhoods
CC GO:0005732 sno(s)RNA-containing ribonucleoprotein complex IEP Predict GO terms from Neighborhoods
CC GO:0005749 mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone) IEP Predict GO terms from Neighborhoods
CC GO:0005750 mitochondrial respiratory chain complex III IEP Predict GO terms from Neighborhoods
BP GO:0006099 tricarboxylic acid cycle IEP Predict GO terms from Neighborhoods
BP GO:0006122 mitochondrial electron transport, ubiquinol to cytochrome c IEP Predict GO terms from Neighborhoods
BP GO:0006281 DNA repair IEP Predict GO terms from Neighborhoods
BP GO:0006919 activation of cysteine-type endopeptidase activity involved in apoptotic process IEP Predict GO terms from Neighborhoods
MF GO:0008187 poly-pyrimidine tract binding IEP Predict GO terms from Neighborhoods
MF GO:0008190 eukaryotic initiation factor 4E binding IEP Predict GO terms from Neighborhoods
MF GO:0008266 poly(U) RNA binding IEP Predict GO terms from Neighborhoods
BP GO:0008589 regulation of smoothened signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0008595 anterior/posterior axis specification, embryo IEP Predict GO terms from Neighborhoods
BP GO:0008631 intrinsic apoptotic signaling pathway in response to oxidative stress IEP Predict GO terms from Neighborhoods
BP GO:0008637 apoptotic mitochondrial changes IEP Predict GO terms from Neighborhoods
MF GO:0008821 crossover junction endodeoxyribonuclease activity IEP Predict GO terms from Neighborhoods
BP GO:0009948 anterior/posterior axis specification IEP Predict GO terms from Neighborhoods
BP GO:0010257 NADH dehydrogenase complex assembly IEP Predict GO terms from Neighborhoods
BP GO:0010950 positive regulation of endopeptidase activity IEP Predict GO terms from Neighborhoods
BP GO:0010952 positive regulation of peptidase activity IEP Predict GO terms from Neighborhoods
BP GO:0014041 regulation of neuron maturation IEP Predict GO terms from Neighborhoods
BP GO:0014042 positive regulation of neuron maturation IEP Predict GO terms from Neighborhoods
BP GO:0016344 meiotic chromosome movement towards spindle pole IEP Predict GO terms from Neighborhoods
MF GO:0016889 endodeoxyribonuclease activity, producing 3'-phosphomonoesters IEP Predict GO terms from Neighborhoods
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Predict GO terms from Neighborhoods
MF GO:0017069 snRNA binding IEP Predict GO terms from Neighborhoods
MF GO:0017070 U6 snRNA binding IEP Predict GO terms from Neighborhoods
MF GO:0019788 NEDD8 transferase activity IEP Predict GO terms from Neighborhoods
BP GO:0019915 lipid storage IEP Predict GO terms from Neighborhoods
BP GO:0021535 cell migration in hindbrain IEP Predict GO terms from Neighborhoods
BP GO:0021795 cerebral cortex cell migration IEP Predict GO terms from Neighborhoods
BP GO:0021799 cerebral cortex radially oriented cell migration IEP Predict GO terms from Neighborhoods
BP GO:0021885 forebrain cell migration IEP Predict GO terms from Neighborhoods
BP GO:0021932 hindbrain radial glia guided cell migration IEP Predict GO terms from Neighborhoods
BP GO:0021942 radial glia guided migration of Purkinje cell IEP Predict GO terms from Neighborhoods
BP GO:0022029 telencephalon cell migration IEP Predict GO terms from Neighborhoods
BP GO:0030178 negative regulation of Wnt signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0030490 maturation of SSU-rRNA IEP Predict GO terms from Neighborhoods
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Predict GO terms from Neighborhoods
MF GO:0030674 protein-macromolecule adaptor activity IEP Predict GO terms from Neighborhoods
CC GO:0030875 rDNA protrusion IEP Predict GO terms from Neighborhoods
CC GO:0030891 VCB complex IEP Predict GO terms from Neighborhoods
BP GO:0031146 SCF-dependent proteasomal ubiquitin-dependent protein catabolic process IEP Predict GO terms from Neighborhoods
MF GO:0031369 translation initiation factor binding IEP Predict GO terms from Neighborhoods
BP GO:0031398 positive regulation of protein ubiquitination IEP Predict GO terms from Neighborhoods
CC GO:0031462 Cul2-RING ubiquitin ligase complex IEP Predict GO terms from Neighborhoods
CC GO:0031463 Cul3-RING ubiquitin ligase complex IEP Predict GO terms from Neighborhoods
CC GO:0031464 Cul4A-RING E3 ubiquitin ligase complex IEP Predict GO terms from Neighborhoods
CC GO:0031465 Cul4B-RING E3 ubiquitin ligase complex IEP Predict GO terms from Neighborhoods
CC GO:0031466 Cul5-RING ubiquitin ligase complex IEP Predict GO terms from Neighborhoods
CC GO:0031467 Cul7-RING ubiquitin ligase complex IEP Predict GO terms from Neighborhoods
BP GO:0032981 mitochondrial respiratory chain complex I assembly IEP Predict GO terms from Neighborhoods
BP GO:0033045 regulation of sister chromatid segregation IEP Predict GO terms from Neighborhoods
BP GO:0033108 mitochondrial respiratory chain complex assembly IEP Predict GO terms from Neighborhoods
CC GO:0033557 Slx1-Slx4 complex IEP Predict GO terms from Neighborhoods
MF GO:0034450 ubiquitin-ubiquitin ligase activity IEP Predict GO terms from Neighborhoods
CC GO:0034709 methylosome IEP Predict GO terms from Neighborhoods
CC GO:0034719 SMN-Sm protein complex IEP Predict GO terms from Neighborhoods
CC GO:0035361 Cul8-RING ubiquitin ligase complex IEP Predict GO terms from Neighborhoods
BP GO:0043007 maintenance of rDNA IEP Predict GO terms from Neighborhoods
CC GO:0043224 nuclear SCF ubiquitin ligase complex IEP Predict GO terms from Neighborhoods
BP GO:0043280 positive regulation of cysteine-type endopeptidase activity involved in apoptotic process IEP Predict GO terms from Neighborhoods
BP GO:0043281 regulation of cysteine-type endopeptidase activity involved in apoptotic process IEP Predict GO terms from Neighborhoods
MF GO:0043495 protein-membrane adaptor activity IEP Predict GO terms from Neighborhoods
BP GO:0043516 regulation of DNA damage response, signal transduction by p53 class mediator IEP Predict GO terms from Neighborhoods
BP GO:0043518 negative regulation of DNA damage response, signal transduction by p53 class mediator IEP Predict GO terms from Neighborhoods
BP GO:0043570 maintenance of DNA repeat elements IEP Predict GO terms from Neighborhoods
BP GO:0043687 post-translational protein modification IEP Predict GO terms from Neighborhoods
BP GO:0044843 cell cycle G1/S phase transition IEP Predict GO terms from Neighborhoods
BP GO:0045116 protein neddylation IEP Predict GO terms from Neighborhoods
CC GO:0045257 succinate dehydrogenase complex (ubiquinone) IEP Predict GO terms from Neighborhoods
CC GO:0045275 respiratory chain complex III IEP Predict GO terms from Neighborhoods
CC GO:0045281 succinate dehydrogenase complex IEP Predict GO terms from Neighborhoods
CC GO:0045283 fumarate reductase complex IEP Predict GO terms from Neighborhoods
BP GO:0045292 mRNA cis splicing, via spliceosome IEP Predict GO terms from Neighborhoods
BP GO:0045664 regulation of neuron differentiation IEP Predict GO terms from Neighborhoods
BP GO:0045879 negative regulation of smoothened signaling pathway IEP Predict GO terms from Neighborhoods
CC GO:0046540 U4/U6 x U5 tri-snRNP complex IEP Predict GO terms from Neighborhoods
BP GO:0046626 regulation of insulin receptor signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0046627 negative regulation of insulin receptor signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0050000 chromosome localization IEP Predict GO terms from Neighborhoods
MF GO:0050897 cobalt ion binding IEP Predict GO terms from Neighborhoods
BP GO:0051305 chromosome movement towards spindle pole IEP Predict GO terms from Neighborhoods
BP GO:0051446 positive regulation of meiotic cell cycle IEP Predict GO terms from Neighborhoods
BP GO:0051759 sister chromosome movement towards spindle pole involved in meiotic sister chromatid segregation IEP Predict GO terms from Neighborhoods
BP GO:0051775 response to redox state IEP Predict GO terms from Neighborhoods
MF GO:0060090 molecular adaptor activity IEP Predict GO terms from Neighborhoods
MF GO:0061663 NEDD8 ligase activity IEP Predict GO terms from Neighborhoods
CC GO:0070069 cytochrome complex IEP Predict GO terms from Neighborhoods
BP GO:0070936 protein K48-linked ubiquitination IEP Predict GO terms from Neighborhoods
BP GO:0070979 protein K11-linked ubiquitination IEP Predict GO terms from Neighborhoods
CC GO:0071004 U2-type prespliceosome IEP Predict GO terms from Neighborhoods
CC GO:0071005 U2-type precatalytic spliceosome IEP Predict GO terms from Neighborhoods
CC GO:0071007 U2-type catalytic step 2 spliceosome IEP Predict GO terms from Neighborhoods
CC GO:0071010 prespliceosome IEP Predict GO terms from Neighborhoods
CC GO:0071011 precatalytic spliceosome IEP Predict GO terms from Neighborhoods
BP GO:0090090 negative regulation of canonical Wnt signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0097193 intrinsic apoptotic signaling pathway IEP Predict GO terms from Neighborhoods
CC GO:0097525 spliceosomal snRNP complex IEP Predict GO terms from Neighborhoods
CC GO:0097526 spliceosomal tri-snRNP complex IEP Predict GO terms from Neighborhoods
MF GO:0097602 cullin family protein binding IEP Predict GO terms from Neighborhoods
MF GO:0106332 ds/ssDNA junction-specific dsDNA endonuclease activity IEP Predict GO terms from Neighborhoods
CC GO:0120114 Sm-like protein family complex IEP Predict GO terms from Neighborhoods
CC GO:0120115 Lsm2-8 complex IEP Predict GO terms from Neighborhoods
CC GO:0140513 nuclear protein-containing complex IEP Predict GO terms from Neighborhoods
BP GO:1900076 regulation of cellular response to insulin stimulus IEP Predict GO terms from Neighborhoods
BP GO:1900077 negative regulation of cellular response to insulin stimulus IEP Predict GO terms from Neighborhoods
BP GO:1901796 regulation of signal transduction by p53 class mediator IEP Predict GO terms from Neighborhoods
BP GO:1901797 negative regulation of signal transduction by p53 class mediator IEP Predict GO terms from Neighborhoods
BP GO:1901993 regulation of meiotic cell cycle phase transition IEP Predict GO terms from Neighborhoods
BP GO:1901995 positive regulation of meiotic cell cycle phase transition IEP Predict GO terms from Neighborhoods
BP GO:1902099 regulation of metaphase/anaphase transition of cell cycle IEP Predict GO terms from Neighborhoods
BP GO:1902101 positive regulation of metaphase/anaphase transition of cell cycle IEP Predict GO terms from Neighborhoods
BP GO:1902102 regulation of metaphase/anaphase transition of meiotic cell cycle IEP Predict GO terms from Neighborhoods
BP GO:1902104 positive regulation of metaphase/anaphase transition of meiotic cell cycle IEP Predict GO terms from Neighborhoods
BP GO:1902229 regulation of intrinsic apoptotic signaling pathway in response to DNA damage IEP Predict GO terms from Neighborhoods
BP GO:1902230 negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage IEP Predict GO terms from Neighborhoods
BP GO:1902498 regulation of protein autoubiquitination IEP Predict GO terms from Neighborhoods
BP GO:1902499 positive regulation of protein autoubiquitination IEP Predict GO terms from Neighborhoods
BP GO:1903429 regulation of cell maturation IEP Predict GO terms from Neighborhoods
BP GO:1903431 positive regulation of cell maturation IEP Predict GO terms from Neighborhoods
BP GO:1904799 regulation of neuron remodeling IEP Predict GO terms from Neighborhoods
BP GO:1904801 positive regulation of neuron remodeling IEP Predict GO terms from Neighborhoods
BP GO:1905132 regulation of meiotic chromosome separation IEP Predict GO terms from Neighborhoods
BP GO:1905134 positive regulation of meiotic chromosome separation IEP Predict GO terms from Neighborhoods
BP GO:1905323 telomerase holoenzyme complex assembly IEP Predict GO terms from Neighborhoods
BP GO:1905818 regulation of chromosome separation IEP Predict GO terms from Neighborhoods
BP GO:1905820 positive regulation of chromosome separation IEP Predict GO terms from Neighborhoods
MF GO:1990238 double-stranded DNA endodeoxyribonuclease activity IEP Predict GO terms from Neighborhoods
CC GO:1990726 Lsm1-7-Pat1 complex IEP Predict GO terms from Neighborhoods
BP GO:2000116 regulation of cysteine-type endopeptidase activity IEP Predict GO terms from Neighborhoods
BP GO:2001021 negative regulation of response to DNA damage stimulus IEP Predict GO terms from Neighborhoods
BP GO:2001056 positive regulation of cysteine-type endopeptidase activity IEP Predict GO terms from Neighborhoods
BP GO:2001242 regulation of intrinsic apoptotic signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:2001243 negative regulation of intrinsic apoptotic signaling pathway IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR019401 Znf_CHCC 193 229
No external refs found!