SOLTUB.AGRIA.G00000011258

Description : Autophagy-related protein 13

Gene families : OG_02_0008463 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000011258
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_157

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	AHRD
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005773	vacuole	None	Extended
CC	GO:0005776	autophagosome	IEA	AHRD
BP	GO:0006914	autophagy	None	Extended
BP	GO:0006996	organelle organization	IEA	AHRD
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0016236	macroautophagy	IEA	AHRD
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0061919	process utilizing autophagic mechanism	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0000155	phosphorelay sensor kinase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004673	protein histidine kinase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0005253	anion channel activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0005310	dicarboxylic acid transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0005684	U2-type spliceosomal complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0005789	endoplasmic reticulum membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0006471	protein ADP-ribosylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0006487	protein N-linked glycosylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0006490	oligosaccharide-lipid intermediate biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006835	dicarboxylic acid transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0009625	response to insect	IEP	Predict GO terms from Neighborhoods
BP	GO:0009720	detection of hormone stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0009726	detection of endogenous stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0009727	detection of ethylene stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0009733	response to auxin	IEP	Predict GO terms from Neighborhoods
MF	GO:0009927	histidine phosphotransfer kinase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0009966	regulation of signal transduction	IEP	Predict GO terms from Neighborhoods
BP	GO:0010044	response to aluminum ion	IEP	Predict GO terms from Neighborhoods
BP	GO:0010104	regulation of ethylene-activated signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0010105	negative regulation of ethylene-activated signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0010162	seed dormancy process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010364	regulation of ethylene biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010366	negative regulation of ethylene biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010646	regulation of cell communication	IEP	Predict GO terms from Neighborhoods
MF	GO:0015140	malate transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0015556	C4-dicarboxylate transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0015740	C4-dicarboxylate transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0015743	malate transport	IEP	Predict GO terms from Neighborhoods
MF	GO:0016775	phosphotransferase activity, nitrogenous group as acceptor	IEP	Predict GO terms from Neighborhoods
BP	GO:0018106	peptidyl-histidine phosphorylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0018202	peptidyl-histidine modification	IEP	Predict GO terms from Neighborhoods
BP	GO:0022611	dormancy process	IEP	Predict GO terms from Neighborhoods
BP	GO:0023051	regulation of signaling	IEP	Predict GO terms from Neighborhoods
CC	GO:0030532	small nuclear ribonucleoprotein complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0031335	regulation of sulfur amino acid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0031336	negative regulation of sulfur amino acid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0032204	regulation of telomere maintenance	IEP	Predict GO terms from Neighborhoods
BP	GO:0035295	tube development	IEP	Predict GO terms from Neighborhoods
CC	GO:0035618	root hair	IEP	Predict GO terms from Neighborhoods
MF	GO:0038199	ethylene receptor activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0042281	dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0042743	hydrogen peroxide metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0042762	regulation of sulfur metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0048565	digestive tract development	IEP	Predict GO terms from Neighborhoods
BP	GO:0050665	hydrogen peroxide biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0051175	negative regulation of sulfur metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0051740	ethylene binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0052386	cell wall thickening	IEP	Predict GO terms from Neighborhoods
BP	GO:0052482	defense response by cell wall thickening	IEP	Predict GO terms from Neighborhoods
BP	GO:0052542	defense response by callose deposition	IEP	Predict GO terms from Neighborhoods
BP	GO:0052543	callose deposition in cell wall	IEP	Predict GO terms from Neighborhoods
BP	GO:0052544	defense response by callose deposition in cell wall	IEP	Predict GO terms from Neighborhoods
BP	GO:0062014	negative regulation of small molecule metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0070297	regulation of phosphorelay signal transduction system	IEP	Predict GO terms from Neighborhoods
BP	GO:0070298	negative regulation of phosphorelay signal transduction system	IEP	Predict GO terms from Neighborhoods
CC	GO:0071013	catalytic step 2 spliceosome	IEP	Predict GO terms from Neighborhoods
BP	GO:0071423	malate transmembrane transport	IEP	Predict GO terms from Neighborhoods
MF	GO:0072328	alkene binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0090092	regulation of transmembrane receptor protein serine/threonine kinase signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0090332	stomatal closure	IEP	Predict GO terms from Neighborhoods
CC	GO:0097525	spliceosomal snRNP complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0120114	Sm-like protein family complex	IEP	Predict GO terms from Neighborhoods
MF	GO:0140299	small molecule sensor activity	IEP	Predict GO terms from Neighborhoods
BP	GO:1900908	regulation of olefin metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1900909	negative regulation of olefin metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1900911	regulation of olefin biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1900912	negative regulation of olefin biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1903409	reactive oxygen species biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:2000904	regulation of starch metabolic process	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR018731	Atg13_N	20	214

External Links

No external refs found!

SOLTUB.AGRIA.G00000011258

Expression Profile

Co-expression Networks

Functional Annotation