Description : RNA polymerase II degradation factor
Gene families : OG_02_0008445 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000011314 | |
| Cluster | HCCA Clusters (HRR 50 & PCC 0.5): Cluster_210 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000049 | tRNA binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000741 | karyogamy | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0001671 | ATPase activator activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0002161 | aminoacyl-tRNA editing activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0002196 | Ser-tRNA(Ala) hydrolase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0003714 | transcription corepressor activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004813 | alanine-tRNA ligase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004817 | cysteine-tRNA ligase activity | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005652 | nuclear lamina | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005739 | mitochondrion | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005788 | endoplasmic reticulum lumen | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006399 | tRNA metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006417 | regulation of translation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006419 | alanyl-tRNA aminoacylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006423 | cysteinyl-tRNA aminoacylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006448 | regulation of translational elongation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006450 | regulation of translational fidelity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006458 | 'de novo' protein folding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006520 | cellular amino acid metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006612 | protein targeting to membrane | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006613 | cotranslational protein targeting to membrane | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006614 | SRP-dependent cotranslational protein targeting to membrane | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006620 | post-translational protein targeting to endoplasmic reticulum membrane | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006997 | nucleus organization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0007006 | mitochondrial membrane organization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0007007 | inner mitochondrial membrane organization | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008320 | protein transmembrane transporter activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010197 | polar nucleus fusion | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010608 | post-transcriptional regulation of gene expression | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0016363 | nuclear matrix | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016597 | amino acid binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016874 | ligase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0021680 | cerebellar Purkinje cell layer development | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0022884 | macromolecule transmembrane transporter activity | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0030176 | integral component of endoplasmic reticulum membrane | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0030544 | Hsp70 protein binding | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0031207 | Sec62/Sec63 complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0031227 | intrinsic component of endoplasmic reticulum membrane | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032781 | positive regulation of ATP-dependent activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0034248 | regulation of cellular amide metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0034660 | ncRNA metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042407 | cristae formation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043038 | amino acid activation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043039 | tRNA aminoacylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043067 | regulation of programmed cell death | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0043197 | dendritic spine | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043462 | regulation of ATP-dependent activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043523 | regulation of neuron apoptotic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043524 | negative regulation of neuron apoptotic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043578 | nuclear matrix organization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043618 | regulation of transcription from RNA polymerase II promoter in response to stress | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043620 | regulation of DNA-templated transcription in response to stress | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0044183 | protein folding chaperone | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0044309 | neuron spine | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045047 | protein targeting to ER | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0046686 | response to cadmium ion | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0050885 | neuromuscular process controlling balance | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0050905 | neuromuscular process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051084 | 'de novo' post-translational protein folding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051085 | chaperone cofactor-dependent protein refolding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0051087 | chaperone binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0051117 | ATPase binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0061077 | chaperone-mediated protein folding | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0061827 | sperm head | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0070127 | tRNA aminoacylation for mitochondrial protein translation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0070143 | mitochondrial alanyl-tRNA aminoacylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0070972 | protein localization to endoplasmic reticulum | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071806 | protein transmembrane transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0072599 | establishment of protein localization to endoplasmic reticulum | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0090083 | regulation of inclusion body assembly | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0090084 | negative regulation of inclusion body assembly | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0097201 | negative regulation of transcription from RNA polymerase II promoter in response to stress | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0097298 | regulation of nucleus size | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0098794 | postsynapse | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0099522 | cytosolic region | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0099524 | postsynaptic cytosol | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0106074 | aminoacyl-tRNA metabolism involved in translational fidelity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0140018 | regulation of cytoplasmic translational fidelity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0140318 | protein transporter activity | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0140534 | endoplasmic reticulum protein-containing complex | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0140677 | molecular function activator activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1900247 | regulation of cytoplasmic translational elongation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1901215 | negative regulation of neuron death | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1902584 | positive regulation of response to water deprivation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1990762 | cytoplasmic alanyl-tRNA aminoacylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | Predict GO terms from Neighborhoods |
No InterPro domains available for this sequence
| No external refs found! |