SOLTUB.AGRIA.G00000011358


Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_02_0008423 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000011358
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_34


Type GO Term Name Evidence Source
BP GO:0001822 kidney development IEA AHRD
BP GO:0001947 heart looping IEA AHRD
BP GO:0003146 heart jogging IEA AHRD
BP GO:0003283 atrial septum development IEA AHRD
MF GO:0005515 protein binding IEA AHRD
CC GO:0005576 extracellular region IEA AHRD
CC GO:0005737 cytoplasm IEA AHRD
CC GO:0005829 cytosol IEA AHRD
CC GO:0005856 cytoskeleton IEA AHRD
CC GO:0005871 kinesin complex IEA AHRD
CC GO:0005874 microtubule IEA AHRD
CC GO:0005929 cilium IEA AHRD
BP GO:0006629 lipid metabolic process IEA AHRD
BP GO:0007163 establishment or maintenance of cell polarity IEA AHRD
BP GO:0007368 determination of left/right symmetry IEA AHRD
BP GO:0007601 visual perception IEA AHRD
BP GO:0016055 Wnt signaling pathway IEA AHRD
BP GO:0030198 extracellular matrix organization IEA AHRD
BP GO:0030324 lung development IEA AHRD
BP GO:0032092 positive regulation of protein binding IEA AHRD
BP GO:0035469 determination of pancreatic left/right asymmetry IEA AHRD
CC GO:0042995 cell projection IEA AHRD
BP GO:0045494 photoreceptor cell maintenance IEA AHRD
BP GO:0048496 maintenance of animal organ identity IEA AHRD
BP GO:0048793 pronephros development IEA AHRD
BP GO:0060026 convergent extension IEA AHRD
BP GO:0060027 convergent extension involved in gastrulation IEA AHRD
BP GO:0060271 cilium assembly IEA AHRD
BP GO:0060287 epithelial cilium movement involved in determination of left/right asymmetry IEA AHRD
BP GO:0060972 left/right pattern formation IEA AHRD
BP GO:0060993 kidney morphogenesis IEA AHRD
BP GO:0070121 Kupffer's vesicle development IEA AHRD
BP GO:0071908 determination of intestine left/right asymmetry IEA AHRD
BP GO:0071909 determination of stomach left/right asymmetry IEA AHRD
BP GO:0071910 determination of liver left/right asymmetry IEA AHRD
BP GO:0072189 ureter development IEA AHRD
BP GO:0090090 negative regulation of canonical Wnt signaling pathway IEA AHRD
CC GO:0097543 ciliary inversin compartment IEA AHRD
CC GO:0097546 ciliary base IEA AHRD
BP GO:1905515 non-motile cilium assembly IEA AHRD
BP GO:2000095 regulation of Wnt signaling pathway, planar cell polarity pathway IEA AHRD
BP GO:2000167 regulation of planar cell polarity pathway involved in neural tube closure IEA AHRD
Type GO Term Name Evidence Source
MF GO:0000146 microfilament motor activity IEP Predict GO terms from Neighborhoods
BP GO:0000281 mitotic cytokinesis IEP Predict GO terms from Neighborhoods
CC GO:0001726 ruffle IEP Predict GO terms from Neighborhoods
CC GO:0001931 uropod IEP Predict GO terms from Neighborhoods
MF GO:0003774 cytoskeletal motor activity IEP Predict GO terms from Neighborhoods
MF GO:0003779 actin binding IEP Predict GO terms from Neighborhoods
CC GO:0005770 late endosome IEP Predict GO terms from Neighborhoods
CC GO:0005826 actomyosin contractile ring IEP Predict GO terms from Neighborhoods
CC GO:0005903 brush border IEP Predict GO terms from Neighborhoods
BP GO:0006898 receptor-mediated endocytosis IEP Predict GO terms from Neighborhoods
BP GO:0006971 hypotonic response IEP Predict GO terms from Neighborhoods
BP GO:0007015 actin filament organization IEP Predict GO terms from Neighborhoods
BP GO:0007097 nuclear migration IEP Predict GO terms from Neighborhoods
BP GO:0008064 regulation of actin polymerization or depolymerization IEP Predict GO terms from Neighborhoods
MF GO:0008092 cytoskeletal protein binding IEP Predict GO terms from Neighborhoods
BP GO:0008360 regulation of cell shape IEP Predict GO terms from Neighborhoods
CC GO:0009527 plastid outer membrane IEP Predict GO terms from Neighborhoods
CC GO:0009532 plastid stroma IEP Predict GO terms from Neighborhoods
BP GO:0009581 detection of external stimulus IEP Predict GO terms from Neighborhoods
BP GO:0009582 detection of abiotic stimulus IEP Predict GO terms from Neighborhoods
BP GO:0009612 response to mechanical stimulus IEP Predict GO terms from Neighborhoods
CC GO:0009707 chloroplast outer membrane IEP Predict GO terms from Neighborhoods
BP GO:0010020 chloroplast fission IEP Predict GO terms from Neighborhoods
BP GO:0010154 fruit development IEP Predict GO terms from Neighborhoods
BP GO:0010239 chloroplast mRNA processing IEP Predict GO terms from Neighborhoods
BP GO:0010720 positive regulation of cell development IEP Predict GO terms from Neighborhoods
BP GO:0010770 positive regulation of cell morphogenesis involved in differentiation IEP Predict GO terms from Neighborhoods
BP GO:0014074 response to purine-containing compound IEP Predict GO terms from Neighborhoods
CC GO:0015629 actin cytoskeleton IEP Predict GO terms from Neighborhoods
BP GO:0016192 vesicle-mediated transport IEP Predict GO terms from Neighborhoods
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Predict GO terms from Neighborhoods
MF GO:0016308 1-phosphatidylinositol-4-phosphate 5-kinase activity IEP Predict GO terms from Neighborhoods
CC GO:0016459 myosin complex IEP Predict GO terms from Neighborhoods
CC GO:0016460 myosin II complex IEP Predict GO terms from Neighborhoods
BP GO:0017157 regulation of exocytosis IEP Predict GO terms from Neighborhoods
BP GO:0030036 actin cytoskeleton organization IEP Predict GO terms from Neighborhoods
BP GO:0030038 contractile actin filament bundle assembly IEP Predict GO terms from Neighborhoods
BP GO:0030048 actin filament-based movement IEP Predict GO terms from Neighborhoods
BP GO:0030050 vesicle transport along actin filament IEP Predict GO terms from Neighborhoods
CC GO:0030133 transport vesicle IEP Predict GO terms from Neighborhoods
CC GO:0030139 endocytic vesicle IEP Predict GO terms from Neighborhoods
BP GO:0030516 regulation of axon extension IEP Predict GO terms from Neighborhoods
BP GO:0030705 cytoskeleton-dependent intracellular transport IEP Predict GO terms from Neighborhoods
BP GO:0030832 regulation of actin filament length IEP Predict GO terms from Neighborhoods
BP GO:0030833 regulation of actin filament polymerization IEP Predict GO terms from Neighborhoods
BP GO:0030837 negative regulation of actin filament polymerization IEP Predict GO terms from Neighborhoods
BP GO:0030865 cortical cytoskeleton organization IEP Predict GO terms from Neighborhoods
BP GO:0030866 cortical actin cytoskeleton organization IEP Predict GO terms from Neighborhoods
MF GO:0030899 calcium-dependent ATPase activity IEP Predict GO terms from Neighborhoods
BP GO:0031033 myosin filament organization IEP Predict GO terms from Neighborhoods
BP GO:0031034 myosin filament assembly IEP Predict GO terms from Neighborhoods
CC GO:0031143 pseudopodium IEP Predict GO terms from Neighborhoods
BP GO:0031152 aggregation involved in sorocarp development IEP Predict GO terms from Neighborhoods
BP GO:0031154 culmination involved in sorocarp development IEP Predict GO terms from Neighborhoods
CC GO:0031164 contractile vacuolar membrane IEP Predict GO terms from Neighborhoods
BP GO:0031175 neuron projection development IEP Predict GO terms from Neighborhoods
MF GO:0031267 small GTPase binding IEP Predict GO terms from Neighborhoods
BP GO:0031268 pseudopodium organization IEP Predict GO terms from Neighborhoods
BP GO:0031270 pseudopodium retraction IEP Predict GO terms from Neighborhoods
CC GO:0031312 extrinsic component of organelle membrane IEP Predict GO terms from Neighborhoods
BP GO:0031333 negative regulation of protein-containing complex assembly IEP Predict GO terms from Neighborhoods
BP GO:0031346 positive regulation of cell projection organization IEP Predict GO terms from Neighborhoods
BP GO:0031425 chloroplast RNA processing IEP Predict GO terms from Neighborhoods
BP GO:0031503 protein-containing complex localization IEP Predict GO terms from Neighborhoods
CC GO:0031941 filamentous actin IEP Predict GO terms from Neighborhoods
CC GO:0032009 early phagosome IEP Predict GO terms from Neighborhoods
BP GO:0032060 bleb assembly IEP Predict GO terms from Neighborhoods
CC GO:0032154 cleavage furrow IEP Predict GO terms from Neighborhoods
BP GO:0032271 regulation of protein polymerization IEP Predict GO terms from Neighborhoods
BP GO:0032272 negative regulation of protein polymerization IEP Predict GO terms from Neighborhoods
CC GO:0032433 filopodium tip IEP Predict GO terms from Neighborhoods
BP GO:0032456 endocytic recycling IEP Predict GO terms from Neighborhoods
BP GO:0032796 uropod organization IEP Predict GO terms from Neighborhoods
BP GO:0032878 regulation of establishment or maintenance of cell polarity IEP Predict GO terms from Neighborhoods
BP GO:0032956 regulation of actin cytoskeleton organization IEP Predict GO terms from Neighborhoods
BP GO:0032970 regulation of actin filament-based process IEP Predict GO terms from Neighborhoods
CC GO:0032982 myosin filament IEP Predict GO terms from Neighborhoods
BP GO:0032989 cellular component morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0032990 cell part morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0033275 actin-myosin filament sliding IEP Predict GO terms from Neighborhoods
BP GO:0033298 contractile vacuole organization IEP Predict GO terms from Neighborhoods
BP GO:0034461 uropod retraction IEP Predict GO terms from Neighborhoods
MF GO:0035254 glutamate receptor binding IEP Predict GO terms from Neighborhoods
MF GO:0035255 ionotropic glutamate receptor binding IEP Predict GO terms from Neighborhoods
CC GO:0035452 extrinsic component of plastid membrane IEP Predict GO terms from Neighborhoods
CC GO:0035619 root hair tip IEP Predict GO terms from Neighborhoods
CC GO:0042470 melanosome IEP Predict GO terms from Neighborhoods
CC GO:0042641 actomyosin IEP Predict GO terms from Neighborhoods
CC GO:0043197 dendritic spine IEP Predict GO terms from Neighborhoods
BP GO:0043200 response to amino acid IEP Predict GO terms from Neighborhoods
BP GO:0043572 plastid fission IEP Predict GO terms from Neighborhoods
CC GO:0044309 neuron spine IEP Predict GO terms from Neighborhoods
CC GO:0045179 apical cortex IEP Predict GO terms from Neighborhoods
CC GO:0045335 phagocytic vesicle IEP Predict GO terms from Neighborhoods
BP GO:0045773 positive regulation of axon extension IEP Predict GO terms from Neighborhoods
BP GO:0045921 positive regulation of exocytosis IEP Predict GO terms from Neighborhoods
BP GO:0046683 response to organophosphorus IEP Predict GO terms from Neighborhoods
BP GO:0046847 filopodium assembly IEP Predict GO terms from Neighborhoods
BP GO:0048438 floral whorl development IEP Predict GO terms from Neighborhoods
BP GO:0048467 gynoecium development IEP Predict GO terms from Neighborhoods
BP GO:0048579 negative regulation of long-day photoperiodism, flowering IEP Predict GO terms from Neighborhoods
BP GO:0048586 regulation of long-day photoperiodism, flowering IEP Predict GO terms from Neighborhoods
BP GO:0048587 regulation of short-day photoperiodism, flowering IEP Predict GO terms from Neighborhoods
BP GO:0048768 root hair cell tip growth IEP Predict GO terms from Neighborhoods
CC GO:0048770 pigment granule IEP Predict GO terms from Neighborhoods
BP GO:0048812 neuron projection morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0048814 regulation of dendrite morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0048858 cell projection morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0050767 regulation of neurogenesis IEP Predict GO terms from Neighborhoods
BP GO:0050769 positive regulation of neurogenesis IEP Predict GO terms from Neighborhoods
BP GO:0050770 regulation of axonogenesis IEP Predict GO terms from Neighborhoods
BP GO:0050772 positive regulation of axonogenesis IEP Predict GO terms from Neighborhoods
BP GO:0050773 regulation of dendrite development IEP Predict GO terms from Neighborhoods
BP GO:0050775 positive regulation of dendrite morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0050804 modulation of chemical synaptic transmission IEP Predict GO terms from Neighborhoods
BP GO:0050807 regulation of synapse organization IEP Predict GO terms from Neighborhoods
BP GO:0050982 detection of mechanical stimulus IEP Predict GO terms from Neighborhoods
MF GO:0051015 actin filament binding IEP Predict GO terms from Neighborhoods
BP GO:0051017 actin filament bundle assembly IEP Predict GO terms from Neighborhoods
MF GO:0051020 GTPase binding IEP Predict GO terms from Neighborhoods
BP GO:0051047 positive regulation of secretion IEP Predict GO terms from Neighborhoods
BP GO:0051494 negative regulation of cytoskeleton organization IEP Predict GO terms from Neighborhoods
BP GO:0051591 response to cAMP IEP Predict GO terms from Neighborhoods
BP GO:0051645 Golgi localization IEP Predict GO terms from Neighborhoods
BP GO:0051646 mitochondrion localization IEP Predict GO terms from Neighborhoods
BP GO:0051647 nucleus localization IEP Predict GO terms from Neighborhoods
BP GO:0051648 vesicle localization IEP Predict GO terms from Neighborhoods
BP GO:0051650 establishment of vesicle localization IEP Predict GO terms from Neighborhoods
BP GO:0051962 positive regulation of nervous system development IEP Predict GO terms from Neighborhoods
MF GO:0060001 minus-end directed microfilament motor activity IEP Predict GO terms from Neighborhoods
BP GO:0060151 peroxisome localization IEP Predict GO terms from Neighborhoods
BP GO:0060327 cytoplasmic actin-based contraction involved in cell motility IEP Predict GO terms from Neighborhoods
BP GO:0060328 cytoplasmic actin-based contraction involved in forward cell motility IEP Predict GO terms from Neighborhoods
BP GO:0060997 dendritic spine morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0061387 regulation of extent of cell growth IEP Predict GO terms from Neighborhoods
BP GO:0061572 actin filament bundle organization IEP Predict GO terms from Neighborhoods
BP GO:0061640 cytoskeleton-dependent cytokinesis IEP Predict GO terms from Neighborhoods
BP GO:0061951 establishment of protein localization to plasma membrane IEP Predict GO terms from Neighborhoods
BP GO:0070252 actin-mediated cell contraction IEP Predict GO terms from Neighborhoods
CC GO:0070938 contractile ring IEP Predict GO terms from Neighborhoods
BP GO:0071230 cellular response to amino acid stimulus IEP Predict GO terms from Neighborhoods
MF GO:0071889 14-3-3 protein binding IEP Predict GO terms from Neighborhoods
BP GO:0072583 clathrin-dependent endocytosis IEP Predict GO terms from Neighborhoods
BP GO:0072659 protein localization to plasma membrane IEP Predict GO terms from Neighborhoods
BP GO:0090436 leaf pavement cell development IEP Predict GO terms from Neighborhoods
BP GO:0097061 dendritic spine organization IEP Predict GO terms from Neighborhoods
CC GO:0097204 phagocytic cup base IEP Predict GO terms from Neighborhoods
CC GO:0098590 plasma membrane region IEP Predict GO terms from Neighborhoods
CC GO:0098685 Schaffer collateral - CA1 synapse IEP Predict GO terms from Neighborhoods
CC GO:0098794 postsynapse IEP Predict GO terms from Neighborhoods
CC GO:0098862 cluster of actin-based cell projections IEP Predict GO terms from Neighborhoods
CC GO:0098871 postsynaptic actin cytoskeleton IEP Predict GO terms from Neighborhoods
BP GO:0098876 vesicle-mediated transport to the plasma membrane IEP Predict GO terms from Neighborhoods
BP GO:0098877 neurotransmitter receptor transport to plasma membrane IEP Predict GO terms from Neighborhoods
CC GO:0098895 postsynaptic endosome membrane IEP Predict GO terms from Neighborhoods
CC GO:0098944 postsynaptic recycling endosome membrane IEP Predict GO terms from Neighborhoods
CC GO:0098978 glutamatergic synapse IEP Predict GO terms from Neighborhoods
BP GO:0099003 vesicle-mediated transport in synapse IEP Predict GO terms from Neighborhoods
BP GO:0099159 regulation of modification of postsynaptic structure IEP Predict GO terms from Neighborhoods
BP GO:0099173 postsynapse organization IEP Predict GO terms from Neighborhoods
BP GO:0099177 regulation of trans-synaptic signaling IEP Predict GO terms from Neighborhoods
BP GO:0099515 actin filament-based transport IEP Predict GO terms from Neighborhoods
BP GO:0099518 vesicle cytoskeletal trafficking IEP Predict GO terms from Neighborhoods
CC GO:0099568 cytoplasmic region IEP Predict GO terms from Neighborhoods
CC GO:0099571 postsynaptic cytoskeleton IEP Predict GO terms from Neighborhoods
BP GO:0099637 neurotransmitter receptor transport IEP Predict GO terms from Neighborhoods
BP GO:0099638 endosome to plasma membrane protein transport IEP Predict GO terms from Neighborhoods
BP GO:0099639 neurotransmitter receptor transport, endosome to plasma membrane IEP Predict GO terms from Neighborhoods
CC GO:0099738 cell cortex region IEP Predict GO terms from Neighborhoods
BP GO:0106027 neuron projection organization IEP Predict GO terms from Neighborhoods
BP GO:0110053 regulation of actin filament organization IEP Predict GO terms from Neighborhoods
BP GO:0120039 plasma membrane bounded cell projection morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0140027 contractile vacuole localization IEP Predict GO terms from Neighborhoods
BP GO:1902903 regulation of supramolecular fiber organization IEP Predict GO terms from Neighborhoods
BP GO:1902904 negative regulation of supramolecular fiber organization IEP Predict GO terms from Neighborhoods
BP GO:1903076 regulation of protein localization to plasma membrane IEP Predict GO terms from Neighborhoods
BP GO:1903078 positive regulation of protein localization to plasma membrane IEP Predict GO terms from Neighborhoods
BP GO:1903532 positive regulation of secretion by cell IEP Predict GO terms from Neighborhoods
BP GO:1903541 regulation of exosomal secretion IEP Predict GO terms from Neighborhoods
BP GO:1903543 positive regulation of exosomal secretion IEP Predict GO terms from Neighborhoods
BP GO:1904375 regulation of protein localization to cell periphery IEP Predict GO terms from Neighborhoods
BP GO:1904377 positive regulation of protein localization to cell periphery IEP Predict GO terms from Neighborhoods
BP GO:1905244 regulation of modification of synaptic structure IEP Predict GO terms from Neighborhoods
BP GO:1905429 response to glycine IEP Predict GO terms from Neighborhoods
BP GO:1905430 cellular response to glycine IEP Predict GO terms from Neighborhoods
BP GO:1905475 regulation of protein localization to membrane IEP Predict GO terms from Neighborhoods
BP GO:1905477 positive regulation of protein localization to membrane IEP Predict GO terms from Neighborhoods
CC GO:1990753 equatorial cell cortex IEP Predict GO terms from Neighborhoods
BP GO:1990849 vacuolar localization IEP Predict GO terms from Neighborhoods
BP GO:2000769 regulation of establishment or maintenance of cell polarity regulating cell shape IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR011990 TPR-like_helical_dom_sf 275 471
IPR011990 TPR-like_helical_dom_sf 186 301
No external refs found!