Description : Protein defective in meristem silencing 3
Gene families : OG_02_0008417 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000011390 | |
Cluster | HCCA Clusters (HRR 50 & PCC 0.5): Cluster_206 |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000419 | RNA polymerase V complex | IEA | AHRD |
BP | GO:0000724 | double-strand break repair via homologous recombination | IEA | AHRD |
BP | GO:0006306 | DNA methylation | IEA | AHRD |
MF | GO:0042803 | protein homodimerization activity | IEA | AHRD |
BP | GO:0080188 | gene silencing by RNA-directed DNA methylation | IEA | AHRD |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000049 | tRNA binding | IEP | Predict GO terms from Neighborhoods |
BP | GO:0000731 | DNA synthesis involved in DNA repair | IEP | Predict GO terms from Neighborhoods |
BP | GO:0000740 | nuclear membrane fusion | IEP | Predict GO terms from Neighborhoods |
BP | GO:0000741 | karyogamy | IEP | Predict GO terms from Neighborhoods |
CC | GO:0000791 | euchromatin | IEP | Predict GO terms from Neighborhoods |
BP | GO:0001910 | regulation of leukocyte mediated cytotoxicity | IEP | Predict GO terms from Neighborhoods |
BP | GO:0001914 | regulation of T cell mediated cytotoxicity | IEP | Predict GO terms from Neighborhoods |
BP | GO:0001959 | regulation of cytokine-mediated signaling pathway | IEP | Predict GO terms from Neighborhoods |
BP | GO:0001977 | renal system process involved in regulation of blood volume | IEP | Predict GO terms from Neighborhoods |
BP | GO:0002230 | positive regulation of defense response to virus by host | IEP | Predict GO terms from Neighborhoods |
BP | GO:0002429 | immune response-activating cell surface receptor signaling pathway | IEP | Predict GO terms from Neighborhoods |
BP | GO:0002637 | regulation of immunoglobulin production | IEP | Predict GO terms from Neighborhoods |
BP | GO:0002639 | positive regulation of immunoglobulin production | IEP | Predict GO terms from Neighborhoods |
BP | GO:0002696 | positive regulation of leukocyte activation | IEP | Predict GO terms from Neighborhoods |
BP | GO:0002700 | regulation of production of molecular mediator of immune response | IEP | Predict GO terms from Neighborhoods |
BP | GO:0002702 | positive regulation of production of molecular mediator of immune response | IEP | Predict GO terms from Neighborhoods |
BP | GO:0002703 | regulation of leukocyte mediated immunity | IEP | Predict GO terms from Neighborhoods |
BP | GO:0002705 | positive regulation of leukocyte mediated immunity | IEP | Predict GO terms from Neighborhoods |
BP | GO:0002706 | regulation of lymphocyte mediated immunity | IEP | Predict GO terms from Neighborhoods |
BP | GO:0002708 | positive regulation of lymphocyte mediated immunity | IEP | Predict GO terms from Neighborhoods |
BP | GO:0002709 | regulation of T cell mediated immunity | IEP | Predict GO terms from Neighborhoods |
BP | GO:0002711 | positive regulation of T cell mediated immunity | IEP | Predict GO terms from Neighborhoods |
BP | GO:0002712 | regulation of B cell mediated immunity | IEP | Predict GO terms from Neighborhoods |
BP | GO:0002714 | positive regulation of B cell mediated immunity | IEP | Predict GO terms from Neighborhoods |
BP | GO:0002768 | immune response-regulating cell surface receptor signaling pathway | IEP | Predict GO terms from Neighborhoods |
BP | GO:0002819 | regulation of adaptive immune response | IEP | Predict GO terms from Neighborhoods |
BP | GO:0002821 | positive regulation of adaptive immune response | IEP | Predict GO terms from Neighborhoods |
BP | GO:0002822 | regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains | IEP | Predict GO terms from Neighborhoods |
BP | GO:0002824 | positive regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains | IEP | Predict GO terms from Neighborhoods |
BP | GO:0002889 | regulation of immunoglobulin mediated immune response | IEP | Predict GO terms from Neighborhoods |
BP | GO:0002891 | positive regulation of immunoglobulin mediated immune response | IEP | Predict GO terms from Neighborhoods |
BP | GO:0002920 | regulation of humoral immune response | IEP | Predict GO terms from Neighborhoods |
BP | GO:0002923 | regulation of humoral immune response mediated by circulating immunoglobulin | IEP | Predict GO terms from Neighborhoods |
BP | GO:0002943 | tRNA dihydrouridine synthesis | IEP | Predict GO terms from Neighborhoods |
BP | GO:0003014 | renal system process | IEP | Predict GO terms from Neighborhoods |
BP | GO:0003071 | renal system process involved in regulation of systemic arterial blood pressure | IEP | Predict GO terms from Neighborhoods |
BP | GO:0003093 | regulation of glomerular filtration | IEP | Predict GO terms from Neighborhoods |
MF | GO:0003676 | nucleic acid binding | IEP | Predict GO terms from Neighborhoods |
MF | GO:0003677 | DNA binding | IEP | Predict GO terms from Neighborhoods |
MF | GO:0003723 | RNA binding | IEP | Predict GO terms from Neighborhoods |
MF | GO:0003756 | protein disulfide isomerase activity | IEP | Predict GO terms from Neighborhoods |
MF | GO:0003887 | DNA-directed DNA polymerase activity | IEP | Predict GO terms from Neighborhoods |
MF | GO:0004652 | polynucleotide adenylyltransferase activity | IEP | Predict GO terms from Neighborhoods |
MF | GO:0004659 | prenyltransferase activity | IEP | Predict GO terms from Neighborhoods |
MF | GO:0004661 | protein geranylgeranyltransferase activity | IEP | Predict GO terms from Neighborhoods |
MF | GO:0004663 | Rab geranylgeranyltransferase activity | IEP | Predict GO terms from Neighborhoods |
MF | GO:0004725 | protein tyrosine phosphatase activity | IEP | Predict GO terms from Neighborhoods |
MF | GO:0005200 | structural constituent of cytoskeleton | IEP | Predict GO terms from Neighborhoods |
CC | GO:0005657 | replication fork | IEP | Predict GO terms from Neighborhoods |
CC | GO:0005694 | chromosome | IEP | Predict GO terms from Neighborhoods |
CC | GO:0005700 | polytene chromosome | IEP | Predict GO terms from Neighborhoods |
CC | GO:0005739 | mitochondrion | IEP | Predict GO terms from Neighborhoods |
CC | GO:0005968 | Rab-protein geranylgeranyltransferase complex | IEP | Predict GO terms from Neighborhoods |
BP | GO:0006260 | DNA replication | IEP | Predict GO terms from Neighborhoods |
BP | GO:0006290 | pyrimidine dimer repair | IEP | Predict GO terms from Neighborhoods |
BP | GO:0006301 | postreplication repair | IEP | Predict GO terms from Neighborhoods |
BP | GO:0006469 | negative regulation of protein kinase activity | IEP | Predict GO terms from Neighborhoods |
BP | GO:0006928 | obsolete movement of cell or subcellular component | IEP | Predict GO terms from Neighborhoods |
BP | GO:0006996 | organelle organization | IEP | Predict GO terms from Neighborhoods |
BP | GO:0006997 | nucleus organization | IEP | Predict GO terms from Neighborhoods |
BP | GO:0007063 | regulation of sister chromatid cohesion | IEP | Predict GO terms from Neighborhoods |
BP | GO:0007127 | meiosis I | IEP | Predict GO terms from Neighborhoods |
BP | GO:0007349 | cellularization | IEP | Predict GO terms from Neighborhoods |
BP | GO:0007569 | obsolete cell aging | IEP | Predict GO terms from Neighborhoods |
CC | GO:0008023 | transcription elongation factor complex | IEP | Predict GO terms from Neighborhoods |
BP | GO:0008284 | positive regulation of cell population proliferation | IEP | Predict GO terms from Neighborhoods |
MF | GO:0008318 | protein prenyltransferase activity | IEP | Predict GO terms from Neighborhoods |
BP | GO:0009451 | RNA modification | IEP | Predict GO terms from Neighborhoods |
BP | GO:0009558 | embryo sac cellularization | IEP | Predict GO terms from Neighborhoods |
BP | GO:0009650 | UV protection | IEP | Predict GO terms from Neighborhoods |
BP | GO:0010112 | regulation of systemic acquired resistance | IEP | Predict GO terms from Neighborhoods |
MF | GO:0010181 | FMN binding | IEP | Predict GO terms from Neighborhoods |
BP | GO:0010197 | polar nucleus fusion | IEP | Predict GO terms from Neighborhoods |
BP | GO:0010198 | synergid death | IEP | Predict GO terms from Neighborhoods |
BP | GO:0010225 | response to UV-C | IEP | Predict GO terms from Neighborhoods |
MF | GO:0010334 | sesquiterpene synthase activity | IEP | Predict GO terms from Neighborhoods |
BP | GO:0010363 | regulation of plant-type hypersensitive response | IEP | Predict GO terms from Neighborhoods |
CC | GO:0010369 | chromocenter | IEP | Predict GO terms from Neighborhoods |
BP | GO:0010623 | programmed cell death involved in cell development | IEP | Predict GO terms from Neighborhoods |
MF | GO:0015035 | protein-disulfide reductase activity | IEP | Predict GO terms from Neighborhoods |
BP | GO:0016106 | sesquiterpenoid biosynthetic process | IEP | Predict GO terms from Neighborhoods |
CC | GO:0016605 | PML body | IEP | Predict GO terms from Neighborhoods |
MF | GO:0016779 | nucleotidyltransferase activity | IEP | Predict GO terms from Neighborhoods |
MF | GO:0016860 | intramolecular oxidoreductase activity | IEP | Predict GO terms from Neighborhoods |
MF | GO:0016864 | intramolecular oxidoreductase activity, transposing S-S bonds | IEP | Predict GO terms from Neighborhoods |
MF | GO:0016989 | sigma factor antagonist activity | IEP | Predict GO terms from Neighborhoods |
MF | GO:0017150 | tRNA dihydrouridine synthase activity | IEP | Predict GO terms from Neighborhoods |
BP | GO:0018342 | protein prenylation | IEP | Predict GO terms from Neighborhoods |
BP | GO:0018344 | protein geranylgeranylation | IEP | Predict GO terms from Neighborhoods |
MF | GO:0019840 | isoprenoid binding | IEP | Predict GO terms from Neighborhoods |
BP | GO:0019985 | translesion synthesis | IEP | Predict GO terms from Neighborhoods |
BP | GO:0022008 | neurogenesis | IEP | Predict GO terms from Neighborhoods |
BP | GO:0022407 | regulation of cell-cell adhesion | IEP | Predict GO terms from Neighborhoods |
BP | GO:0022409 | positive regulation of cell-cell adhesion | IEP | Predict GO terms from Neighborhoods |
BP | GO:0030447 | filamentous growth | IEP | Predict GO terms from Neighborhoods |
BP | GO:0030968 | endoplasmic reticulum unfolded protein response | IEP | Predict GO terms from Neighborhoods |
BP | GO:0031341 | regulation of cell killing | IEP | Predict GO terms from Neighborhoods |
MF | GO:0031491 | nucleosome binding | IEP | Predict GO terms from Neighborhoods |
BP | GO:0031935 | obsolete regulation of chromatin silencing | IEP | Predict GO terms from Neighborhoods |
BP | GO:0032507 | maintenance of protein location in cell | IEP | Predict GO terms from Neighborhoods |
BP | GO:0032663 | regulation of interleukin-2 production | IEP | Predict GO terms from Neighborhoods |
BP | GO:0032835 | glomerulus development | IEP | Predict GO terms from Neighborhoods |
BP | GO:0032944 | regulation of mononuclear cell proliferation | IEP | Predict GO terms from Neighborhoods |
BP | GO:0032946 | positive regulation of mononuclear cell proliferation | IEP | Predict GO terms from Neighborhoods |
MF | GO:0033549 | MAP kinase phosphatase activity | IEP | Predict GO terms from Neighborhoods |
MF | GO:0033550 | MAP kinase tyrosine phosphatase activity | IEP | Predict GO terms from Neighborhoods |
BP | GO:0033673 | negative regulation of kinase activity | IEP | Predict GO terms from Neighborhoods |
MF | GO:0034003 | vetispiradiene synthase activity | IEP | Predict GO terms from Neighborhoods |
MF | GO:0034005 | germacrene-A synthase activity | IEP | Predict GO terms from Neighborhoods |
BP | GO:0034052 | positive regulation of plant-type hypersensitive response | IEP | Predict GO terms from Neighborhoods |
MF | GO:0034061 | DNA polymerase activity | IEP | Predict GO terms from Neighborhoods |
MF | GO:0035064 | methylated histone binding | IEP | Predict GO terms from Neighborhoods |
CC | GO:0035101 | FACT complex | IEP | Predict GO terms from Neighborhoods |
BP | GO:0035335 | peptidyl-tyrosine dephosphorylation | IEP | Predict GO terms from Neighborhoods |
CC | GO:0035861 | site of double-strand break | IEP | Predict GO terms from Neighborhoods |
BP | GO:0042026 | protein refolding | IEP | Predict GO terms from Neighborhoods |
BP | GO:0042102 | positive regulation of T cell proliferation | IEP | Predict GO terms from Neighborhoods |
BP | GO:0042127 | regulation of cell population proliferation | IEP | Predict GO terms from Neighborhoods |
BP | GO:0042129 | regulation of T cell proliferation | IEP | Predict GO terms from Neighborhoods |
BP | GO:0042276 | error-prone translesion synthesis | IEP | Predict GO terms from Neighborhoods |
MF | GO:0042393 | histone binding | IEP | Predict GO terms from Neighborhoods |
BP | GO:0043405 | regulation of MAP kinase activity | IEP | Predict GO terms from Neighborhoods |
BP | GO:0043631 | RNA polyadenylation | IEP | Predict GO terms from Neighborhoods |
BP | GO:0044030 | regulation of DNA methylation | IEP | Predict GO terms from Neighborhoods |
BP | GO:0044182 | filamentous growth of a population of unicellular organisms | IEP | Predict GO terms from Neighborhoods |
BP | GO:0045058 | T cell selection | IEP | Predict GO terms from Neighborhoods |
BP | GO:0045061 | thymic T cell selection | IEP | Predict GO terms from Neighborhoods |
BP | GO:0045185 | maintenance of protein location | IEP | Predict GO terms from Neighborhoods |
CC | GO:0045298 | tubulin complex | IEP | Predict GO terms from Neighborhoods |
BP | GO:0045338 | farnesyl diphosphate metabolic process | IEP | Predict GO terms from Neighborhoods |
BP | GO:0045339 | farnesyl diphosphate catabolic process | IEP | Predict GO terms from Neighborhoods |
BP | GO:0045580 | regulation of T cell differentiation | IEP | Predict GO terms from Neighborhoods |
BP | GO:0045582 | positive regulation of T cell differentiation | IEP | Predict GO terms from Neighborhoods |
BP | GO:0045619 | regulation of lymphocyte differentiation | IEP | Predict GO terms from Neighborhoods |
BP | GO:0045621 | positive regulation of lymphocyte differentiation | IEP | Predict GO terms from Neighborhoods |
BP | GO:0045785 | positive regulation of cell adhesion | IEP | Predict GO terms from Neighborhoods |
BP | GO:0045875 | negative regulation of sister chromatid cohesion | IEP | Predict GO terms from Neighborhoods |
BP | GO:0046626 | regulation of insulin receptor signaling pathway | IEP | Predict GO terms from Neighborhoods |
MF | GO:0047461 | (+)-delta-cadinene synthase activity | IEP | Predict GO terms from Neighborhoods |
BP | GO:0048145 | regulation of fibroblast proliferation | IEP | Predict GO terms from Neighborhoods |
BP | GO:0048147 | negative regulation of fibroblast proliferation | IEP | Predict GO terms from Neighborhoods |
BP | GO:0048284 | organelle fusion | IEP | Predict GO terms from Neighborhoods |
BP | GO:0048366 | leaf development | IEP | Predict GO terms from Neighborhoods |
BP | GO:0048442 | sepal development | IEP | Predict GO terms from Neighborhoods |
BP | GO:0048480 | stigma development | IEP | Predict GO terms from Neighborhoods |
BP | GO:0048699 | generation of neurons | IEP | Predict GO terms from Neighborhoods |
BP | GO:0048705 | skeletal system morphogenesis | IEP | Predict GO terms from Neighborhoods |
BP | GO:0048827 | phyllome development | IEP | Predict GO terms from Neighborhoods |
BP | GO:0050670 | regulation of lymphocyte proliferation | IEP | Predict GO terms from Neighborhoods |
BP | GO:0050671 | positive regulation of lymphocyte proliferation | IEP | Predict GO terms from Neighborhoods |
BP | GO:0050691 | regulation of defense response to virus by host | IEP | Predict GO terms from Neighborhoods |
BP | GO:0050730 | regulation of peptidyl-tyrosine phosphorylation | IEP | Predict GO terms from Neighborhoods |
BP | GO:0050731 | positive regulation of peptidyl-tyrosine phosphorylation | IEP | Predict GO terms from Neighborhoods |
BP | GO:0050732 | negative regulation of peptidyl-tyrosine phosphorylation | IEP | Predict GO terms from Neighborhoods |
BP | GO:0050764 | regulation of phagocytosis | IEP | Predict GO terms from Neighborhoods |
BP | GO:0050851 | antigen receptor-mediated signaling pathway | IEP | Predict GO terms from Neighborhoods |
BP | GO:0050863 | regulation of T cell activation | IEP | Predict GO terms from Neighborhoods |
BP | GO:0050864 | regulation of B cell activation | IEP | Predict GO terms from Neighborhoods |
BP | GO:0050870 | positive regulation of T cell activation | IEP | Predict GO terms from Neighborhoods |
BP | GO:0050871 | positive regulation of B cell activation | IEP | Predict GO terms from Neighborhoods |
BP | GO:0051251 | positive regulation of lymphocyte activation | IEP | Predict GO terms from Neighborhoods |
BP | GO:0051457 | maintenance of protein location in nucleus | IEP | Predict GO terms from Neighborhoods |
BP | GO:0060759 | regulation of response to cytokine stimulus | IEP | Predict GO terms from Neighborhoods |
BP | GO:0061097 | regulation of protein tyrosine kinase activity | IEP | Predict GO terms from Neighborhoods |
BP | GO:0070372 | regulation of ERK1 and ERK2 cascade | IEP | Predict GO terms from Neighborhoods |
MF | GO:0070566 | adenylyltransferase activity | IEP | Predict GO terms from Neighborhoods |
BP | GO:0070663 | regulation of leukocyte proliferation | IEP | Predict GO terms from Neighborhoods |
BP | GO:0070665 | positive regulation of leukocyte proliferation | IEP | Predict GO terms from Neighborhoods |
BP | GO:0071494 | cellular response to UV-C | IEP | Predict GO terms from Neighborhoods |
BP | GO:0071763 | nuclear membrane organization | IEP | Predict GO terms from Neighborhoods |
BP | GO:0072595 | maintenance of protein localization in organelle | IEP | Predict GO terms from Neighborhoods |
BP | GO:0090377 | seed trichome initiation | IEP | Predict GO terms from Neighborhoods |
BP | GO:0090378 | seed trichome elongation | IEP | Predict GO terms from Neighborhoods |
CC | GO:0090734 | site of DNA damage | IEP | Predict GO terms from Neighborhoods |
BP | GO:0097354 | prenylation | IEP | Predict GO terms from Neighborhoods |
BP | GO:0098801 | regulation of renal system process | IEP | Predict GO terms from Neighborhoods |
CC | GO:0099240 | intrinsic component of synaptic membrane | IEP | Predict GO terms from Neighborhoods |
BP | GO:0099402 | plant organ development | IEP | Predict GO terms from Neighborhoods |
CC | GO:0099699 | integral component of synaptic membrane | IEP | Predict GO terms from Neighborhoods |
MF | GO:0102698 | 5-epi-aristolochene synthase activity | IEP | Predict GO terms from Neighborhoods |
MF | GO:0106413 | dihydrouridine synthase activity | IEP | Predict GO terms from Neighborhoods |
MF | GO:0140034 | methylation-dependent protein binding | IEP | Predict GO terms from Neighborhoods |
MF | GO:0140097 | catalytic activity, acting on DNA | IEP | Predict GO terms from Neighborhoods |
MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | Predict GO terms from Neighborhoods |
BP | GO:1901672 | positive regulation of systemic acquired resistance | IEP | Predict GO terms from Neighborhoods |
BP | GO:1902105 | regulation of leukocyte differentiation | IEP | Predict GO terms from Neighborhoods |
BP | GO:1902107 | positive regulation of leukocyte differentiation | IEP | Predict GO terms from Neighborhoods |
BP | GO:1902288 | regulation of defense response to oomycetes | IEP | Predict GO terms from Neighborhoods |
BP | GO:1902290 | positive regulation of defense response to oomycetes | IEP | Predict GO terms from Neighborhoods |
BP | GO:1903037 | regulation of leukocyte cell-cell adhesion | IEP | Predict GO terms from Neighborhoods |
BP | GO:1903039 | positive regulation of leukocyte cell-cell adhesion | IEP | Predict GO terms from Neighborhoods |
BP | GO:1903708 | positive regulation of hemopoiesis | IEP | Predict GO terms from Neighborhoods |
BP | GO:1905897 | regulation of response to endoplasmic reticulum stress | IEP | Predict GO terms from Neighborhoods |
BP | GO:2001236 | regulation of extrinsic apoptotic signaling pathway | IEP | Predict GO terms from Neighborhoods |
No InterPro domains available for this sequence
No external refs found! |