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  5. SOLTUB.AGRIA.G00000012253

SOLTUB.AGRIA.G00000012253


Description : Signal recognition particle 54 kDa protein


Gene families : OG_02_0043274 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000012253
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_69


Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA AHRD
MF GO:0005515 protein binding IEA AHRD
MF GO:0005525 GTP binding IEA AHRD
CC GO:0005634 nucleus IEA AHRD
CC GO:0005786 signal recognition particle, endoplasmic reticulum targeting IEA AHRD
CC GO:0005829 cytosol IEA AHRD
BP GO:0006616 SRP-dependent cotranslational protein targeting to membrane, translocation IEA AHRD
BP GO:0006617 SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition IEA AHRD
MF GO:0008312 7S RNA binding IEA AHRD
MF GO:0019003 GDP binding IEA AHRD
BP GO:0030593 neutrophil chemotaxis IEA AHRD
BP GO:0030851 granulocyte differentiation IEA AHRD
MF GO:0030942 endoplasmic reticulum signal peptide binding IEA AHRD
BP GO:0031017 exocrine pancreas development IEA AHRD
MF GO:0043021 ribonucleoprotein complex binding IEA AHRD
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Type GO Term Name Evidence Source
CC GO:0016604 nuclear body IEP Predict GO terms from Neighborhoods
CC GO:0016607 nuclear speck IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR004125 Signal_recog_particle_SRP54_M 177 275
IPR000897 SRP54_GTPase_dom 113 145
IPR036891 Signal_recog_part_SRP54_M_sf 147 280
No external refs found!