SOLTUB.AGRIA.G00000012258


Description : cyclic nucleotide-gated channel 6


Gene families : OG_02_0008668 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000012258
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_94


Type GO Term Name Evidence Source
MF GO:0005223 intracellular cGMP-activated cation channel activity IEA AHRD
MF GO:0005249 voltage-gated potassium channel activity IEA AHRD
MF GO:0005516 calmodulin binding IEA AHRD
BP GO:0006874 cellular calcium ion homeostasis IEA AHRD
BP GO:0006952 defense response IEA AHRD
BP GO:0009617 response to bacterium IEA AHRD
BP GO:0009620 response to fungus IEA AHRD
BP GO:0009860 pollen tube growth IEA AHRD
BP GO:0009877 nodulation IEA AHRD
CC GO:0016021 integral component of membrane IEA AHRD
CC GO:0016324 apical plasma membrane IEA AHRD
MF GO:0030552 cAMP binding IEA AHRD
MF GO:0030553 cGMP binding IEA AHRD
CC GO:0031965 nuclear membrane IEA AHRD
CC GO:0035618 root hair IEA AHRD
BP GO:0036377 arbuscular mycorrhizal association IEA AHRD
MF GO:0044325 transmembrane transporter binding IEA AHRD
BP GO:0046686 response to cadmium ion IEA AHRD
BP GO:0070588 calcium ion transmembrane transport IEA AHRD
BP GO:0071805 potassium ion transmembrane transport IEA AHRD
BP GO:0080027 response to herbivore IEA AHRD
CC GO:0090406 pollen tube IEA AHRD
MF GO:0099604 ligand-gated calcium channel activity IEA AHRD
Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Predict GO terms from Neighborhoods
MF GO:0001671 ATPase activator activity IEP Predict GO terms from Neighborhoods
BP GO:0001894 tissue homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0001906 cell killing IEP Predict GO terms from Neighborhoods
BP GO:0002097 tRNA wobble base modification IEP Predict GO terms from Neighborhoods
BP GO:0002098 tRNA wobble uridine modification IEP Predict GO terms from Neighborhoods
BP GO:0002240 response to molecule of oomycetes origin IEP Predict GO terms from Neighborhoods
BP GO:0003008 system process IEP Predict GO terms from Neighborhoods
BP GO:0003013 circulatory system process IEP Predict GO terms from Neighborhoods
BP GO:0003018 vascular process in circulatory system IEP Predict GO terms from Neighborhoods
MF GO:0003841 1-acylglycerol-3-phosphate O-acyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0004022 alcohol dehydrogenase (NAD+) activity IEP Predict GO terms from Neighborhoods
MF GO:0004552 octanol dehydrogenase activity IEP Predict GO terms from Neighborhoods
MF GO:0004568 chitinase activity IEP Predict GO terms from Neighborhoods
MF GO:0004652 polynucleotide adenylyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0005351 carbohydrate:proton symporter activity IEP Predict GO terms from Neighborhoods
MF GO:0005354 galactose transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0005355 glucose transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0005365 myo-inositol transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0005402 carbohydrate:cation symporter activity IEP Predict GO terms from Neighborhoods
CC GO:0005634 nucleus IEP Predict GO terms from Neighborhoods
CC GO:0005774 vacuolar membrane IEP Predict GO terms from Neighborhoods
CC GO:0005887 integral component of plasma membrane IEP Predict GO terms from Neighborhoods
CC GO:0005911 cell-cell junction IEP Predict GO terms from Neighborhoods
BP GO:0006026 aminoglycan catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006030 chitin metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006032 chitin catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006040 amino sugar metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006066 alcohol metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006213 pyrimidine nucleoside metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006399 tRNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006820 anion transport IEP Predict GO terms from Neighborhoods
BP GO:0006826 iron ion transport IEP Predict GO terms from Neighborhoods
BP GO:0006857 oligopeptide transport IEP Predict GO terms from Neighborhoods
BP GO:0007632 visual behavior IEP Predict GO terms from Neighborhoods
BP GO:0007639 homeostasis of number of meristem cells IEP Predict GO terms from Neighborhoods
MF GO:0008061 chitin binding IEP Predict GO terms from Neighborhoods
MF GO:0008198 ferrous iron binding IEP Predict GO terms from Neighborhoods
BP GO:0008306 associative learning IEP Predict GO terms from Neighborhoods
MF GO:0008509 anion transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0008542 visual learning IEP Predict GO terms from Neighborhoods
BP GO:0008645 hexose transmembrane transport IEP Predict GO terms from Neighborhoods
MF GO:0008843 endochitinase activity IEP Predict GO terms from Neighborhoods
BP GO:0009116 nucleoside metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009120 deoxyribonucleoside metabolic process IEP Predict GO terms from Neighborhoods
CC GO:0009506 plasmodesma IEP Predict GO terms from Neighborhoods
BP GO:0009626 plant-type hypersensitive response IEP Predict GO terms from Neighborhoods
BP GO:0009738 abscisic acid-activated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0009753 response to jasmonic acid IEP Predict GO terms from Neighborhoods
BP GO:0009793 embryo development ending in seed dormancy IEP Predict GO terms from Neighborhoods
BP GO:0009914 hormone transport IEP Predict GO terms from Neighborhoods
BP GO:0009926 auxin polar transport IEP Predict GO terms from Neighborhoods
BP GO:0010068 protoderm histogenesis IEP Predict GO terms from Neighborhoods
BP GO:0010193 response to ozone IEP Predict GO terms from Neighborhoods
BP GO:0010232 vascular transport IEP Predict GO terms from Neighborhoods
BP GO:0010233 phloem transport IEP Predict GO terms from Neighborhoods
BP GO:0010264 myo-inositol hexakisphosphate biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0010329 auxin efflux transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015026 coreceptor activity IEP Predict GO terms from Neighborhoods
BP GO:0015031 protein transport IEP Predict GO terms from Neighborhoods
MF GO:0015078 proton transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015086 cadmium ion transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015146 pentose transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015148 D-xylose transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015149 hexose transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015166 polyol transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015168 glycerol transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015291 secondary active transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015334 high-affinity oligopeptide transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015386 potassium:proton antiporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015575 mannitol transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015576 sorbitol transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015591 D-ribose transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0015691 cadmium ion transport IEP Predict GO terms from Neighborhoods
BP GO:0015692 lead ion transport IEP Predict GO terms from Neighborhoods
BP GO:0015711 organic anion transport IEP Predict GO terms from Neighborhoods
BP GO:0015750 pentose transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0015798 myo-inositol transport IEP Predict GO terms from Neighborhoods
BP GO:0015833 peptide transport IEP Predict GO terms from Neighborhoods
BP GO:0015850 organic hydroxy compound transport IEP Predict GO terms from Neighborhoods
BP GO:0016074 sno(s)RNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0016075 rRNA catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0016077 sno(s)RNA catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0016078 tRNA catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0016145 S-glycoside catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0016226 iron-sulfur cluster assembly IEP Predict GO terms from Neighborhoods
MF GO:0016411 acylglycerol O-acyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0016657 oxidoreductase activity, acting on NAD(P)H, nitrogenous group as acceptor IEP Predict GO terms from Neighborhoods
MF GO:0018455 alcohol dehydrogenase [NAD(P)+] activity IEP Predict GO terms from Neighborhoods
BP GO:0019759 glycosinolate catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0019762 glucosinolate catabolic process IEP Predict GO terms from Neighborhoods
MF GO:0022804 active transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0022821 solute:potassium antiporter activity IEP Predict GO terms from Neighborhoods
MF GO:0022853 active ion transmembrane transporter activity IEP Predict GO terms from Neighborhoods
CC GO:0030054 cell junction IEP Predict GO terms from Neighborhoods
BP GO:0031163 metallo-sulfur cluster assembly IEP Predict GO terms from Neighborhoods
CC GO:0031499 TRAMP complex IEP Predict GO terms from Neighborhoods
CC GO:0031520 plasma membrane of cell tip IEP Predict GO terms from Neighborhoods
BP GO:0031640 killing of cells of another organism IEP Predict GO terms from Neighborhoods
CC GO:0031967 organelle envelope IEP Predict GO terms from Neighborhoods
CC GO:0031975 envelope IEP Predict GO terms from Neighborhoods
CC GO:0031984 organelle subcompartment IEP Predict GO terms from Neighborhoods
BP GO:0032501 multicellular organismal process IEP Predict GO terms from Neighborhoods
BP GO:0032958 inositol phosphate biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0033036 macromolecule localization IEP Predict GO terms from Neighborhoods
BP GO:0033517 myo-inositol hexakisphosphate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0034050 programmed cell death induced by symbiont IEP Predict GO terms from Neighborhoods
MF GO:0034634 glutathione transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0034635 glutathione transport IEP Predict GO terms from Neighborhoods
BP GO:0034661 ncRNA catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0034756 regulation of iron ion transport IEP Predict GO terms from Neighborhoods
BP GO:0034757 negative regulation of iron ion transport IEP Predict GO terms from Neighborhoods
BP GO:0034759 regulation of iron ion transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0034760 negative regulation of iron ion transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0034775 glutathione transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0035442 dipeptide transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0035443 tripeptide transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0035672 oligopeptide transmembrane transport IEP Predict GO terms from Neighborhoods
MF GO:0035673 oligopeptide transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0042171 lysophosphatidic acid acyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0042344 indole glucosinolate catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0042436 indole-containing compound catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0042742 defense response to bacterium IEP Predict GO terms from Neighborhoods
BP GO:0042886 amide transport IEP Predict GO terms from Neighborhoods
MF GO:0042887 amide transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0042937 tripeptide transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0042939 tripeptide transport IEP Predict GO terms from Neighborhoods
MF GO:0043023 ribosomal large subunit binding IEP Predict GO terms from Neighborhoods
BP GO:0043201 response to leucine IEP Predict GO terms from Neighborhoods
BP GO:0043457 regulation of cellular respiration IEP Predict GO terms from Neighborhoods
BP GO:0043629 ncRNA polyadenylation IEP Predict GO terms from Neighborhoods
BP GO:0043630 ncRNA polyadenylation involved in polyadenylation-dependent ncRNA catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0043631 RNA polyadenylation IEP Predict GO terms from Neighborhoods
BP GO:0043633 polyadenylation-dependent RNA catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0043634 polyadenylation-dependent ncRNA catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0043647 inositol phosphate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0044270 cellular nitrogen compound catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0044273 sulfur compound catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0044571 [2Fe-2S] cluster assembly IEP Predict GO terms from Neighborhoods
BP GO:0044572 [4Fe-4S] cluster assembly IEP Predict GO terms from Neighborhoods
BP GO:0045184 establishment of protein localization IEP Predict GO terms from Neighborhoods
BP GO:0046104 thymidine metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046125 pyrimidine deoxyribonucleoside metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046173 polyol biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0046292 formaldehyde metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046348 amino sugar catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046700 heterocycle catabolic process IEP Predict GO terms from Neighborhoods
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0048235 pollen sperm cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0048366 leaf development IEP Predict GO terms from Neighborhoods
BP GO:0048825 cotyledon development IEP Predict GO terms from Neighborhoods
BP GO:0048873 homeostasis of number of cells within a tissue IEP Predict GO terms from Neighborhoods
BP GO:0050832 defense response to fungus IEP Predict GO terms from Neighborhoods
MF GO:0051139 metal cation:proton antiporter activity IEP Predict GO terms from Neighborhoods
BP GO:0051339 regulation of lyase activity IEP Predict GO terms from Neighborhoods
BP GO:0051349 positive regulation of lyase activity IEP Predict GO terms from Neighborhoods
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Predict GO terms from Neighborhoods
BP GO:0051702 biological process involved in interaction with symbiont IEP Predict GO terms from Neighborhoods
MF GO:0051903 S-(hydroxymethyl)glutathione dehydrogenase activity IEP Predict GO terms from Neighborhoods
BP GO:0055067 monovalent inorganic cation homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0055072 iron ion homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0055076 transition metal ion homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0055078 sodium ion homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0060918 auxin transport IEP Predict GO terms from Neighborhoods
CC GO:0070161 anchoring junction IEP Predict GO terms from Neighborhoods
CC GO:0070505 pollen coat IEP Predict GO terms from Neighborhoods
BP GO:0070542 response to fatty acid IEP Predict GO terms from Neighborhoods
MF GO:0070566 adenylyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0070727 cellular macromolecule localization IEP Predict GO terms from Neighborhoods
BP GO:0071025 RNA surveillance IEP Predict GO terms from Neighborhoods
BP GO:0071027 nuclear RNA surveillance IEP Predict GO terms from Neighborhoods
BP GO:0071029 nuclear ncRNA surveillance IEP Predict GO terms from Neighborhoods
BP GO:0071035 nuclear polyadenylation-dependent rRNA catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0071046 nuclear polyadenylation-dependent ncRNA catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0071366 cellular response to indolebutyric acid stimulus IEP Predict GO terms from Neighborhoods
BP GO:0071369 cellular response to ethylene stimulus IEP Predict GO terms from Neighborhoods
BP GO:0071417 cellular response to organonitrogen compound IEP Predict GO terms from Neighborhoods
MF GO:0071617 lysophospholipid acyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0071702 organic substance transport IEP Predict GO terms from Neighborhoods
MF GO:0071916 dipeptide transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0072337 modified amino acid transport IEP Predict GO terms from Neighborhoods
BP GO:0072348 sulfur compound transport IEP Predict GO terms from Neighborhoods
MF GO:0072349 modified amino acid transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0080007 S-nitrosoglutathione reductase activity IEP Predict GO terms from Neighborhoods
BP GO:0080026 response to indolebutyric acid IEP Predict GO terms from Neighborhoods
BP GO:0080052 response to histidine IEP Predict GO terms from Neighborhoods
BP GO:0080053 response to phenylalanine IEP Predict GO terms from Neighborhoods
MF GO:0080161 auxin transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0080164 regulation of nitric oxide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0080168 abscisic acid transport IEP Predict GO terms from Neighborhoods
BP GO:0098542 defense response to other organism IEP Predict GO terms from Neighborhoods
CC GO:0098588 bounding membrane of organelle IEP Predict GO terms from Neighborhoods
BP GO:0098656 anion transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0098657 import into cell IEP Predict GO terms from Neighborhoods
BP GO:0098709 glutathione import across plasma membrane IEP Predict GO terms from Neighborhoods
BP GO:0098739 import across plasma membrane IEP Predict GO terms from Neighborhoods
BP GO:0099402 plant organ development IEP Predict GO terms from Neighborhoods
MF GO:0102311 8-hydroxygeraniol dehydrogenase activity IEP Predict GO terms from Neighborhoods
BP GO:0140205 oligopeptide import across plasma membrane IEP Predict GO terms from Neighborhoods
BP GO:0140207 tripeptide import across plasma membrane IEP Predict GO terms from Neighborhoods
BP GO:0140426 PAMP-triggered immunity signalling pathway IEP Predict GO terms from Neighborhoods
MF GO:0140677 molecular function activator activity IEP Predict GO terms from Neighborhoods
MF GO:0140828 metal cation:monoatomic cation antiporter activity IEP Predict GO terms from Neighborhoods
BP GO:1901071 glucosamine-containing compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901072 glucosamine-containing compound catabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901136 carbohydrate derivative catabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901140 p-coumaryl alcohol transport IEP Predict GO terms from Neighborhoods
BP GO:1901583 tetrapeptide import across plasma membrane IEP Predict GO terms from Neighborhoods
BP GO:1901656 glycoside transport IEP Predict GO terms from Neighborhoods
BP GO:1901699 cellular response to nitrogen compound IEP Predict GO terms from Neighborhoods
BP GO:1901857 positive regulation of cellular respiration IEP Predict GO terms from Neighborhoods
BP GO:1902956 regulation of mitochondrial electron transport, NADH to ubiquinone IEP Predict GO terms from Neighborhoods
BP GO:1902958 positive regulation of mitochondrial electron transport, NADH to ubiquinone IEP Predict GO terms from Neighborhoods
BP GO:1903715 regulation of aerobic respiration IEP Predict GO terms from Neighborhoods
BP GO:1904063 negative regulation of cation transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:1904232 regulation of aconitate hydratase activity IEP Predict GO terms from Neighborhoods
BP GO:1904234 positive regulation of aconitate hydratase activity IEP Predict GO terms from Neighborhoods
BP GO:1904438 regulation of iron ion import across plasma membrane IEP Predict GO terms from Neighborhoods
BP GO:1904439 negative regulation of iron ion import across plasma membrane IEP Predict GO terms from Neighborhoods
MF GO:1904680 peptide transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:1905393 plant organ formation IEP Predict GO terms from Neighborhoods
BP GO:1990388 xylem-to-phloem iron transport IEP Predict GO terms from Neighborhoods
MF GO:1990817 RNA adenylyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:2000033 regulation of seed dormancy process IEP Predict GO terms from Neighborhoods
BP GO:2000071 regulation of defense response by callose deposition IEP Predict GO terms from Neighborhoods
BP GO:2000117 negative regulation of cysteine-type endopeptidase activity IEP Predict GO terms from Neighborhoods
BP GO:2000169 regulation of peptidyl-cysteine S-nitrosylation IEP Predict GO terms from Neighborhoods
BP GO:2000280 regulation of root development IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR018490 cNMP-bd_dom_sf 428 618
IPR005821 Ion_trans_dom 102 426
IPR000595 cNMP-bd_dom 523 611
No external refs found!