Coexpression cluster: Cluster_94 (HCCA Clusters (HRR 50 & PCC 0.5))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0030312 external encapsulating structure 20.0% (21/105) 2.01 0.0 6.7e-05
GO:0009962 regulation of flavonoid biosynthetic process 6.67% (7/105) 3.56 2e-06 0.001287
GO:0048446 petal morphogenesis 3.81% (4/105) 5.11 6e-06 0.001292
GO:0005618 cell wall 17.14% (18/105) 1.87 2e-06 0.001429
GO:0048235 pollen sperm cell differentiation 5.71% (6/105) 3.78 5e-06 0.001478
GO:0003006 developmental process involved in reproduction 31.43% (33/105) 1.14 5e-06 0.001705
GO:0048444 floral organ morphogenesis 4.76% (5/105) 4.35 5e-06 0.001987
GO:0071695 anatomical structure maturation 7.62% (8/105) 2.65 4.5e-05 0.009019
GO:0032502 developmental process 42.86% (45/105) 0.67 0.00033 0.023155
GO:0046915 transition metal ion transmembrane transporter activity 3.81% (4/105) 3.63 0.000318 0.023351
GO:0004650 polygalacturonase activity 2.86% (3/105) 4.45 0.000357 0.024046
GO:0071554 cell wall organization or biogenesis 11.43% (12/105) 1.6 0.000612 0.024129
GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds 6.67% (7/105) 2.5 0.000256 0.024294
GO:0052597 diamine oxidase activity 1.9% (2/105) 6.22 0.000317 0.024405
GO:0097185 cellular response to azide 1.9% (2/105) 6.22 0.000317 0.024405
GO:0016798 hydrolase activity, acting on glycosyl bonds 7.62% (8/105) 2.09 0.000606 0.024485
GO:0009719 response to endogenous stimulus 23.81% (25/105) 0.99 0.000561 0.024497
GO:1990388 xylem-to-phloem iron transport 1.9% (2/105) 5.84 0.000547 0.024546
GO:0097184 response to azide 1.9% (2/105) 5.84 0.000547 0.024546
GO:0015154 disaccharide transmembrane transporter activity 2.86% (3/105) 4.63 0.000246 0.024866
GO:0015157 oligosaccharide transmembrane transporter activity 2.86% (3/105) 4.63 0.000246 0.024866
GO:0031640 killing of cells of another organism 2.86% (3/105) 4.19 0.000605 0.02508
GO:0015766 disaccharide transport 2.86% (3/105) 4.19 0.000605 0.02508
GO:0008150 biological_process 78.1% (82/105) 0.34 0.000221 0.025452
GO:0009901 anther dehiscence 3.81% (4/105) 3.43 0.000539 0.025638
GO:0045488 pectin metabolic process 5.71% (6/105) 2.5 0.000702 0.025792
GO:0009505 plant-type cell wall 8.57% (9/105) 1.91 0.000693 0.026061
GO:0009644 response to high light intensity 4.76% (5/105) 3.12 0.000291 0.026097
GO:0015772 oligosaccharide transport 2.86% (3/105) 4.1 0.000729 0.026176
GO:0051119 sugar transmembrane transporter activity 3.81% (4/105) 3.65 0.000308 0.02619
GO:0022890 inorganic cation transmembrane transporter activity 7.62% (8/105) 2.12 0.000536 0.026253
GO:0015770 sucrose transport 2.86% (3/105) 4.27 0.000522 0.02636
GO:0071555 cell wall organization 9.52% (10/105) 1.78 0.000686 0.026387
GO:0009725 response to hormone 22.86% (24/105) 1.03 0.000509 0.026509
GO:0016441 post-transcriptional gene silencing 3.81% (4/105) 3.46 0.000497 0.026749
GO:0010393 galacturonan metabolic process 5.71% (6/105) 2.48 0.000769 0.027029
GO:1901787 benzoyl-CoA metabolic process 1.9% (2/105) 5.54 0.000837 0.027047
GO:0102311 8-hydroxygeraniol dehydrogenase activity 1.9% (2/105) 5.54 0.000837 0.027047
GO:0015144 carbohydrate transmembrane transporter activity 3.81% (4/105) 3.48 0.000469 0.027091
GO:0000041 transition metal ion transport 4.76% (5/105) 2.96 0.000491 0.02734
GO:0009835 fruit ripening 4.76% (5/105) 3.23 0.000203 0.027351
GO:0034219 carbohydrate transmembrane transport 3.81% (4/105) 3.77 0.00022 0.027374
GO:0046886 positive regulation of hormone biosynthetic process 2.86% (3/105) 4.06 0.000796 0.027379
GO:0009698 phenylpropanoid metabolic process 9.52% (10/105) 1.75 0.000816 0.027471
GO:0050896 response to stimulus 54.29% (57/105) 0.49 0.00087 0.027576
GO:1905200 gibberellic acid transmembrane transport 1.9% (2/105) 5.96 0.000464 0.027742
GO:1905201 gibberellin transmembrane transporter activity 1.9% (2/105) 5.96 0.000464 0.027742
GO:0046873 metal ion transmembrane transporter activity 5.71% (6/105) 2.43 0.000918 0.028542
GO:0021700 developmental maturation 7.62% (8/105) 2.33 0.000201 0.029532
GO:0030001 metal ion transport 7.62% (8/105) 2.15 0.000459 0.02968
GO:0006790 sulfur compound metabolic process 9.52% (10/105) 1.71 0.000998 0.02988
GO:0001906 cell killing 2.86% (3/105) 3.96 0.000982 0.029935
GO:0015149 hexose transmembrane transporter activity 2.86% (3/105) 3.94 0.001022 0.030024
GO:0008515 sucrose transmembrane transporter activity 2.86% (3/105) 4.77 0.000186 0.030123
GO:0042545 cell wall modification 6.67% (7/105) 2.14 0.001107 0.030322
GO:0051903 S-(hydroxymethyl)glutathione dehydrogenase activity 1.9% (2/105) 5.37 0.001063 0.030683
GO:0008645 hexose transmembrane transport 2.86% (3/105) 3.9 0.001105 0.030791
GO:0009699 phenylpropanoid biosynthetic process 8.57% (9/105) 1.81 0.001094 0.031003
GO:0022414 reproductive process 32.38% (34/105) 0.88 0.000174 0.031301
GO:0008374 O-acyltransferase activity 4.76% (5/105) 2.63 0.00133 0.031617
GO:0006290 pyrimidine dimer repair 1.9% (2/105) 5.22 0.001316 0.031735
GO:0008131 primary amine oxidase activity 1.9% (2/105) 5.22 0.001316 0.031735
GO:0031224 intrinsic component of membrane 19.05% (20/105) 1.05 0.001293 0.032138
GO:0090697 post-embryonic plant organ morphogenesis 4.76% (5/105) 2.66 0.001235 0.032201
GO:1900055 regulation of leaf senescence 4.76% (5/105) 2.67 0.001199 0.03229
GO:0045229 external encapsulating structure organization 10.48% (11/105) 1.57 0.00122 0.032311
GO:0003674 molecular_function 74.29% (78/105) 0.31 0.001286 0.032481
GO:0009058 biosynthetic process 27.62% (29/105) 0.82 0.00128 0.032826
GO:0031226 intrinsic component of plasma membrane 6.67% (7/105) 2.07 0.001443 0.033304
GO:0009723 response to ethylene 6.67% (7/105) 2.08 0.001429 0.033478
GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups 6.67% (7/105) 2.05 0.001594 0.036289
GO:0008324 cation transmembrane transporter activity 7.62% (8/105) 1.87 0.001629 0.036572
GO:0016021 integral component of membrane 17.14% (18/105) 1.1 0.00168 0.037188
GO:0019748 secondary metabolic process 12.38% (13/105) 1.35 0.001756 0.037344
GO:0071704 organic substance metabolic process 51.43% (54/105) 0.47 0.001781 0.037377
GO:0009830 cell wall modification involved in abscission 1.9% (2/105) 5.02 0.001743 0.037553
GO:0044277 cell wall disassembly 1.9% (2/105) 5.02 0.001743 0.037553
GO:0032352 positive regulation of hormone metabolic process 2.86% (3/105) 3.63 0.001867 0.038691
GO:0009416 response to light stimulus 16.19% (17/105) 1.12 0.001941 0.039201
GO:1901136 carbohydrate derivative catabolic process 3.81% (4/105) 2.93 0.001939 0.039655
GO:0006022 aminoglycan metabolic process 2.86% (3/105) 3.6 0.001989 0.039672
GO:0000272 polysaccharide catabolic process 4.76% (5/105) 2.5 0.002018 0.039763
GO:0071836 nectar secretion 1.9% (2/105) 4.84 0.002227 0.039989
GO:0034775 glutathione transmembrane transport 1.9% (2/105) 4.84 0.002227 0.039989
GO:0035443 tripeptide transmembrane transport 1.9% (2/105) 4.84 0.002227 0.039989
GO:0006809 nitric oxide biosynthetic process 1.9% (2/105) 4.84 0.002227 0.039989
GO:0046209 nitric oxide metabolic process 1.9% (2/105) 4.84 0.002227 0.039989
GO:2000488 positive regulation of brassinosteroid biosynthetic process 1.9% (2/105) 4.79 0.002401 0.040002
GO:0030983 mismatched DNA binding 1.9% (2/105) 4.79 0.002401 0.040002
GO:0016411 acylglycerol O-acyltransferase activity 1.9% (2/105) 4.79 0.002401 0.040002
GO:0046864 isoprenoid transport 2.86% (3/105) 3.57 0.002114 0.040676
GO:0046865 terpenoid transport 2.86% (3/105) 3.57 0.002114 0.040676
GO:0009900 dehiscence 3.81% (4/105) 2.86 0.002324 0.040814
GO:0052593 tryptamine:oxygen oxidoreductase (deaminating) activity 0.95% (1/105) 8.54 0.002686 0.040953
GO:0052594 aminoacetone:oxygen oxidoreductase(deaminating) activity 0.95% (1/105) 8.54 0.002686 0.040953
GO:0052595 aliphatic amine oxidase activity 0.95% (1/105) 8.54 0.002686 0.040953
GO:0052596 phenethylamine:oxygen oxidoreductase (deaminating) activity 0.95% (1/105) 8.54 0.002686 0.040953
GO:0005887 integral component of plasma membrane 4.76% (5/105) 2.44 0.002384 0.040992
GO:0008843 endochitinase activity 1.9% (2/105) 4.68 0.002768 0.041032
GO:0046292 formaldehyde metabolic process 1.9% (2/105) 4.68 0.002768 0.041032
GO:0003684 damaged DNA binding 2.86% (3/105) 3.53 0.002312 0.04106
GO:0048571 long-day photoperiodism 2.86% (3/105) 3.51 0.002381 0.041365
GO:0015749 monosaccharide transmembrane transport 2.86% (3/105) 3.56 0.002179 0.041428
GO:0015145 monosaccharide transmembrane transporter activity 2.86% (3/105) 3.47 0.002593 0.041491
GO:0005783 endoplasmic reticulum 11.43% (12/105) 1.36 0.00252 0.041558
GO:0016052 carbohydrate catabolic process 5.71% (6/105) 2.14 0.002548 0.041591
GO:0008643 carbohydrate transport 3.81% (4/105) 2.79 0.002758 0.041657
GO:0016746 acyltransferase activity 6.67% (7/105) 1.92 0.002633 0.041707
GO:0034635 glutathione transport 1.9% (2/105) 4.73 0.002581 0.041713
GO:0047911 galacturan 1,4-alpha-galacturonidase activity 1.9% (2/105) 4.63 0.00296 0.043487
GO:1901135 carbohydrate derivative metabolic process 11.43% (12/105) 1.33 0.002989 0.043519
GO:0006812 cation transport 7.62% (8/105) 1.71 0.003209 0.043579
GO:0080112 seed growth 1.9% (2/105) 4.59 0.003159 0.043629
GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor 1.9% (2/105) 4.59 0.003159 0.043629
GO:0090059 protoxylem development 1.9% (2/105) 4.59 0.003159 0.043629
GO:0005976 polysaccharide metabolic process 7.62% (8/105) 1.71 0.003188 0.043657
GO:0045017 glycerolipid biosynthetic process 3.81% (4/105) 2.73 0.003246 0.043708
GO:0015318 inorganic molecular entity transmembrane transporter activity 7.62% (8/105) 1.72 0.003146 0.044592
GO:0009793 embryo development ending in seed dormancy 8.57% (9/105) 1.59 0.003143 0.044948
GO:0009314 response to radiation 16.19% (17/105) 1.05 0.003142 0.045339
GO:0005975 carbohydrate metabolic process 10.48% (11/105) 1.37 0.003591 0.046804
GO:0004568 chitinase activity 1.9% (2/105) 4.5 0.003574 0.046959
GO:0043667 pollen wall 1.9% (2/105) 4.5 0.003574 0.046959
GO:0120255 olefinic compound biosynthetic process 3.81% (4/105) 2.69 0.003565 0.047607
GO:0006032 chitin catabolic process 1.9% (2/105) 4.45 0.003791 0.048238
GO:1901072 glucosamine-containing compound catabolic process 1.9% (2/105) 4.45 0.003791 0.048238
GO:0006825 copper ion transport 1.9% (2/105) 4.45 0.003791 0.048238
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_102 0.007 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_103 0.007 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_132 0.008 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_148 0.007 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_168 0.007 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_178 0.007 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_189 0.007 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_240 0.007 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_310 0.009 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_329 0.01 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_9 0.015 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_21 0.007 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_23 0.013 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_44 0.007 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_67 0.011 Orthogroups with 8 Potato genotypes Compare
Sequences (105) (download table)

InterPro Domains

GO Terms

Family Terms