SOLTUB.AGRIA.G00000012301

Description : XH/XS domain-containing protein

Gene families : OG_02_0024314 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000012301
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_154

Type	GO Term	Name	Evidence	Source
BP	GO:0000018	regulation of DNA recombination	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	AHRD
MF	GO:0003723	RNA binding	None	Extended
MF	GO:0003725	double-stranded RNA binding	IEA	AHRD
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005911	cell-cell junction	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006282	regulation of DNA repair	None	Extended
BP	GO:0006304	DNA modification	None	Extended
BP	GO:0006305	DNA alkylation	None	Extended
BP	GO:0006306	DNA methylation	IEA	AHRD
BP	GO:0006325	chromatin organization	None	Extended
BP	GO:0006338	chromatin remodeling	None	Extended
BP	GO:0006346	DNA methylation-dependent heterochromatin formation	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
CC	GO:0009506	plasmodesma	IEA	AHRD
BP	GO:0009892	negative regulation of metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010035	response to inorganic substance	None	Extended
BP	GO:0010038	response to metal ion	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010569	regulation of double-strand break repair via homologous recombination	IEA	AHRD
BP	GO:0010605	negative regulation of macromolecule metabolic process	None	Extended
BP	GO:0010629	negative regulation of gene expression	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
CC	GO:0030054	cell junction	None	Extended
BP	GO:0031047	gene silencing by RNA	None	Extended
BP	GO:0031048	small non-coding RNA-dependent heterochromatin formation	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031507	heterochromatin formation	None	Extended
BP	GO:0032259	methylation	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0040029	epigenetic regulation of gene expression	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0043414	macromolecule methylation	None	Extended
MF	GO:0043621	protein self-association	IEA	AHRD
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044728	DNA methylation or demethylation	None	Extended
BP	GO:0045814	negative regulation of gene expression, epigenetic	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0046686	response to cadmium ion	IEA	AHRD
BP	GO:0048519	negative regulation of biological process	None	Extended
BP	GO:0048583	regulation of response to stimulus	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051052	regulation of DNA metabolic process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
CC	GO:0070161	anchoring junction	None	Extended
BP	GO:0070828	heterochromatin organization	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:0080134	regulation of response to stress	None	Extended
BP	GO:0080135	regulation of cellular response to stress	None	Extended
BP	GO:0080188	gene silencing by RNA-directed DNA methylation	IEA	AHRD
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:0140718	facultative heterochromatin formation	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:2000779	regulation of double-strand break repair	None	Extended
BP	GO:2001020	regulation of response to DNA damage stimulus	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0003684	damaged DNA binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0003905	alkylbase DNA N-glycosylase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004620	phospholipase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004806	triglyceride lipase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0006638	neutral lipid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006639	acylglycerol metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0008970	phospholipase A1 activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0010187	negative regulation of seed germination	IEP	Predict GO terms from Neighborhoods
MF	GO:0019104	DNA N-glycosylase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0019915	lipid storage	IEP	Predict GO terms from Neighborhoods
MF	GO:0032131	alkylated DNA binding	IEP	Predict GO terms from Neighborhoods
CC	GO:0032993	protein-DNA complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0046339	diacylglycerol metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046340	diacylglycerol catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046461	neutral lipid catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046462	monoacylglycerol metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046464	acylglycerol catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046503	glycerolipid catabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0047372	acylglycerol lipase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0047714	galactolipase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0052651	monoacylglycerol catabolic process	IEP	Predict GO terms from Neighborhoods

No InterPro domains available for this sequence

External Links

No external refs found!

SOLTUB.AGRIA.G00000012301

Expression Profile

Co-expression Networks

Functional Annotation