SOLTUB.AGRIA.G00000012387


Description : 4-coumarate:CoA ligase


Gene families : OG_02_0013895 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000012387
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_169


Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA AHRD
CC GO:0005829 cytosol IEA AHRD
BP GO:0007623 circadian rhythm IEA AHRD
BP GO:0009800 cinnamic acid biosynthetic process IEA AHRD
BP GO:0009809 lignin biosynthetic process IEA AHRD
BP GO:0010044 response to aluminum ion IEA AHRD
BP GO:0010584 pollen exine formation IEA AHRD
MF GO:0016207 4-coumarate-CoA ligase activity IEA AHRD
MF GO:0018858 benzoate-CoA ligase activity IEA AHRD
BP GO:0033494 ferulate metabolic process IEA AHRD
MF GO:0050563 trans-feruloyl-CoA synthase activity IEA AHRD
BP GO:0052315 phytoalexin biosynthetic process IEA AHRD
MF GO:0106286 (E)-caffeate-CoA ligase activity IEA AHRD
MF GO:0106290 trans-cinnamate-CoA ligase activity IEA AHRD
Type GO Term Name Evidence Source
BP GO:0000022 mitotic spindle elongation IEP Predict GO terms from Neighborhoods
CC GO:0000164 protein phosphatase type 1 complex IEP Predict GO terms from Neighborhoods
BP GO:0001881 receptor recycling IEP Predict GO terms from Neighborhoods
CC GO:0002178 palmitoyltransferase complex IEP Predict GO terms from Neighborhoods
BP GO:0002790 peptide secretion IEP Predict GO terms from Neighborhoods
MF GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity IEP Predict GO terms from Neighborhoods
MF GO:0003958 NADPH-hemoprotein reductase activity IEP Predict GO terms from Neighborhoods
MF GO:0003959 NADPH dehydrogenase activity IEP Predict GO terms from Neighborhoods
MF GO:0003993 acid phosphatase activity IEP Predict GO terms from Neighborhoods
MF GO:0004325 ferrochelatase activity IEP Predict GO terms from Neighborhoods
MF GO:0004478 methionine adenosyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0004616 phosphogluconate dehydrogenase (decarboxylating) activity IEP Predict GO terms from Neighborhoods
MF GO:0004620 phospholipase activity IEP Predict GO terms from Neighborhoods
MF GO:0004713 protein tyrosine kinase activity IEP Predict GO terms from Neighborhoods
MF GO:0004765 shikimate kinase activity IEP Predict GO terms from Neighborhoods
MF GO:0005506 iron ion binding IEP Predict GO terms from Neighborhoods
MF GO:0005515 protein binding IEP Predict GO terms from Neighborhoods
CC GO:0005739 mitochondrion IEP Predict GO terms from Neighborhoods
CC GO:0005768 endosome IEP Predict GO terms from Neighborhoods
CC GO:0005769 early endosome IEP Predict GO terms from Neighborhoods
CC GO:0005783 endoplasmic reticulum IEP Predict GO terms from Neighborhoods
CC GO:0005816 spindle pole body IEP Predict GO terms from Neighborhoods
CC GO:0005886 plasma membrane IEP Predict GO terms from Neighborhoods
CC GO:0005912 adherens junction IEP Predict GO terms from Neighborhoods
BP GO:0005979 regulation of glycogen biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0005981 regulation of glycogen catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006109 regulation of carbohydrate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006113 fermentation IEP Predict GO terms from Neighborhoods
BP GO:0006116 NADH oxidation IEP Predict GO terms from Neighborhoods
BP GO:0006520 cellular amino acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0006559 L-phenylalanine catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006690 icosanoid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006730 one-carbon metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006739 NADP metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006740 NADPH regeneration IEP Predict GO terms from Neighborhoods
BP GO:0006743 ubiquinone metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006744 ubiquinone biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0006766 vitamin metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006767 water-soluble vitamin metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006772 thiamine metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006783 heme biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0006807 nitrogen compound metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0008114 phosphogluconate 2-dehydrogenase activity IEP Predict GO terms from Neighborhoods
MF GO:0008157 protein phosphatase 1 binding IEP Predict GO terms from Neighborhoods
MF GO:0008198 ferrous iron binding IEP Predict GO terms from Neighborhoods
BP GO:0008652 cellular amino acid biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0008970 phospholipase A1 activity IEP Predict GO terms from Neighborhoods
BP GO:0009051 pentose-phosphate shunt, oxidative branch IEP Predict GO terms from Neighborhoods
BP GO:0009072 aromatic amino acid family metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009110 vitamin biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009228 thiamine biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009423 chorismate biosynthetic process IEP Predict GO terms from Neighborhoods
CC GO:0009534 chloroplast thylakoid IEP Predict GO terms from Neighborhoods
CC GO:0009579 thylakoid IEP Predict GO terms from Neighborhoods
BP GO:0009628 response to abiotic stimulus IEP Predict GO terms from Neighborhoods
BP GO:0009649 entrainment of circadian clock IEP Predict GO terms from Neighborhoods
BP GO:0009833 plant-type primary cell wall biogenesis IEP Predict GO terms from Neighborhoods
BP GO:0009861 jasmonic acid and ethylene-dependent systemic resistance IEP Predict GO terms from Neighborhoods
BP GO:0009988 cell-cell recognition IEP Predict GO terms from Neighborhoods
BP GO:0010288 response to lead ion IEP Predict GO terms from Neighborhoods
CC GO:0010330 cellulose synthase complex IEP Predict GO terms from Neighborhoods
BP GO:0010395 rhamnogalacturonan I metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0010400 rhamnogalacturonan I side chain metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0010447 response to acidic pH IEP Predict GO terms from Neighborhoods
BP GO:0010597 green leaf volatile biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0010769 regulation of cell morphogenesis involved in differentiation IEP Predict GO terms from Neighborhoods
BP GO:0010893 positive regulation of steroid biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0015095 magnesium ion transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0015690 aluminum cation transport IEP Predict GO terms from Neighborhoods
BP GO:0015693 magnesium ion transport IEP Predict GO terms from Neighborhoods
CC GO:0016020 membrane IEP Predict GO terms from Neighborhoods
MF GO:0016298 lipase activity IEP Predict GO terms from Neighborhoods
MF GO:0016409 palmitoyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0016491 oxidoreductase activity IEP Predict GO terms from Neighborhoods
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Predict GO terms from Neighborhoods
MF GO:0016653 oxidoreductase activity, acting on NAD(P)H, heme protein as acceptor IEP Predict GO terms from Neighborhoods
MF GO:0016710 trans-cinnamate 4-monooxygenase activity IEP Predict GO terms from Neighborhoods
MF GO:0016740 transferase activity IEP Predict GO terms from Neighborhoods
MF GO:0016759 cellulose synthase activity IEP Predict GO terms from Neighborhoods
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Predict GO terms from Neighborhoods
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Predict GO terms from Neighborhoods
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Predict GO terms from Neighborhoods
MF GO:0016791 phosphatase activity IEP Predict GO terms from Neighborhoods
MF GO:0016840 carbon-nitrogen lyase activity IEP Predict GO terms from Neighborhoods
MF GO:0016841 ammonia-lyase activity IEP Predict GO terms from Neighborhoods
BP GO:0018108 peptidyl-tyrosine phosphorylation IEP Predict GO terms from Neighborhoods
BP GO:0018212 peptidyl-tyrosine modification IEP Predict GO terms from Neighborhoods
BP GO:0018230 peptidyl-L-cysteine S-palmitoylation IEP Predict GO terms from Neighborhoods
BP GO:0018231 peptidyl-S-diacylglycerol-L-cysteine biosynthetic process from peptidyl-cysteine IEP Predict GO terms from Neighborhoods
BP GO:0018345 protein palmitoylation IEP Predict GO terms from Neighborhoods
MF GO:0019187 beta-1,4-mannosyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0019362 pyridine nucleotide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0019372 lipoxygenase pathway IEP Predict GO terms from Neighborhoods
BP GO:0019520 aldonic acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0019521 D-gluconate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0019632 shikimate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0019655 glycolytic fermentation to ethanol IEP Predict GO terms from Neighborhoods
BP GO:0019660 glycolytic fermentation IEP Predict GO terms from Neighborhoods
MF GO:0019706 protein-cysteine S-palmitoyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0019707 protein-cysteine S-acyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0030001 metal ion transport IEP Predict GO terms from Neighborhoods
CC GO:0030017 sarcomere IEP Predict GO terms from Neighborhoods
BP GO:0030072 peptide hormone secretion IEP Predict GO terms from Neighborhoods
BP GO:0030073 insulin secretion IEP Predict GO terms from Neighborhoods
BP GO:0030324 lung development IEP Predict GO terms from Neighborhoods
CC GO:0030428 cell septum IEP Predict GO terms from Neighborhoods
CC GO:0031224 intrinsic component of membrane IEP Predict GO terms from Neighborhoods
CC GO:0031228 intrinsic component of Golgi membrane IEP Predict GO terms from Neighborhoods
CC GO:0031300 intrinsic component of organelle membrane IEP Predict GO terms from Neighborhoods
CC GO:0031314 extrinsic component of mitochondrial inner membrane IEP Predict GO terms from Neighborhoods
CC GO:0031410 cytoplasmic vesicle IEP Predict GO terms from Neighborhoods
MF GO:0031489 myosin V binding IEP Predict GO terms from Neighborhoods
CC GO:0031976 plastid thylakoid IEP Predict GO terms from Neighborhoods
CC GO:0031982 vesicle IEP Predict GO terms from Neighborhoods
BP GO:0032400 melanosome localization IEP Predict GO terms from Neighborhoods
BP GO:0032401 establishment of melanosome localization IEP Predict GO terms from Neighborhoods
BP GO:0032402 melanosome transport IEP Predict GO terms from Neighborhoods
BP GO:0032870 cellular response to hormone stimulus IEP Predict GO terms from Neighborhoods
BP GO:0033572 transferrin transport IEP Predict GO terms from Neighborhoods
BP GO:0034308 primary alcohol metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0034309 primary alcohol biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0034698 response to gonadotropin IEP Predict GO terms from Neighborhoods
BP GO:0035773 insulin secretion involved in cellular response to glucose stimulus IEP Predict GO terms from Neighborhoods
MF GO:0042131 thiamine phosphate phosphatase activity IEP Predict GO terms from Neighborhoods
BP GO:0042168 heme metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0042180 cellular ketone metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0042181 ketone biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0042578 phosphoric ester hydrolase activity IEP Predict GO terms from Neighborhoods
CC GO:0042587 glycogen granule IEP Predict GO terms from Neighborhoods
BP GO:0042723 thiamine-containing compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0042724 thiamine-containing compound biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0043153 entrainment of circadian clock by photoperiod IEP Predict GO terms from Neighborhoods
MF GO:0043169 cation binding IEP Predict GO terms from Neighborhoods
CC GO:0043197 dendritic spine IEP Predict GO terms from Neighborhoods
CC GO:0043226 organelle IEP Predict GO terms from Neighborhoods
CC GO:0043227 membrane-bounded organelle IEP Predict GO terms from Neighborhoods
CC GO:0043229 intracellular organelle IEP Predict GO terms from Neighborhoods
CC GO:0043231 intracellular membrane-bounded organelle IEP Predict GO terms from Neighborhoods
BP GO:0043328 protein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway IEP Predict GO terms from Neighborhoods
BP GO:0043434 response to peptide hormone IEP Predict GO terms from Neighborhoods
BP GO:0043471 regulation of cellular carbohydrate catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0043648 dicarboxylic acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0043650 dicarboxylic acid biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0043849 Ras palmitoyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0044272 sulfur compound biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0045054 constitutive secretory pathway IEP Predict GO terms from Neighborhoods
BP GO:0045056 transcytosis IEP Predict GO terms from Neighborhoods
MF GO:0045296 cadherin binding IEP Predict GO terms from Neighborhoods
MF GO:0045548 phenylalanine ammonia-lyase activity IEP Predict GO terms from Neighborhoods
BP GO:0045940 positive regulation of steroid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046165 alcohol biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0046176 aldonic acid catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046177 D-gluconate catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046417 chorismate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046496 nicotinamide nucleotide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046500 S-adenosylmethionine metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0046566 DOPA dioxygenase activity IEP Predict GO terms from Neighborhoods
MF GO:0046872 metal ion binding IEP Predict GO terms from Neighborhoods
BP GO:0046879 hormone secretion IEP Predict GO terms from Neighborhoods
MF GO:0047714 galactolipase activity IEP Predict GO terms from Neighborhoods
BP GO:0048736 appendage development IEP Predict GO terms from Neighborhoods
BP GO:0048754 branching morphogenesis of an epithelial tube IEP Predict GO terms from Neighborhoods
MF GO:0050297 stizolobate synthase activity IEP Predict GO terms from Neighborhoods
MF GO:0050366 tyramine N-feruloyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0050661 NADP binding IEP Predict GO terms from Neighborhoods
MF GO:0050839 cell adhesion molecule binding IEP Predict GO terms from Neighborhoods
BP GO:0051156 glucose 6-phosphate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0051211 anisotropic cell growth IEP Predict GO terms from Neighborhoods
BP GO:0051231 spindle elongation IEP Predict GO terms from Neighborhoods
BP GO:0051260 protein homooligomerization IEP Predict GO terms from Neighborhoods
BP GO:0051668 localization within membrane IEP Predict GO terms from Neighborhoods
MF GO:0051753 mannan synthase activity IEP Predict GO terms from Neighborhoods
BP GO:0051875 pigment granule localization IEP Predict GO terms from Neighborhoods
BP GO:0051904 pigment granule transport IEP Predict GO terms from Neighborhoods
BP GO:0051905 establishment of pigment granule localization IEP Predict GO terms from Neighborhoods
BP GO:0060173 limb development IEP Predict GO terms from Neighborhoods
BP GO:0061138 morphogenesis of a branching epithelium IEP Predict GO terms from Neighborhoods
BP GO:0070873 regulation of glycogen metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0070995 NADPH oxidation IEP Predict GO terms from Neighborhoods
BP GO:0071367 cellular response to brassinosteroid stimulus IEP Predict GO terms from Neighborhoods
BP GO:0071371 cellular response to gonadotropin stimulus IEP Predict GO terms from Neighborhoods
BP GO:0071467 cellular response to pH IEP Predict GO terms from Neighborhoods
BP GO:0071468 cellular response to acidic pH IEP Predict GO terms from Neighborhoods
CC GO:0072357 PTW/PP1 phosphatase complex IEP Predict GO terms from Neighborhoods
BP GO:0072524 pyridine-containing compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0080092 regulation of pollen tube growth IEP Predict GO terms from Neighborhoods
BP GO:0080173 male-female gamete recognition during double fertilization forming a zygote and endosperm IEP Predict GO terms from Neighborhoods
BP GO:0086019 cell-cell signaling involved in cardiac conduction IEP Predict GO terms from Neighborhoods
BP GO:0086065 cell communication involved in cardiac conduction IEP Predict GO terms from Neighborhoods
BP GO:0086070 SA node cell to atrial cardiac muscle cell communication IEP Predict GO terms from Neighborhoods
BP GO:0090057 root radial pattern formation IEP Predict GO terms from Neighborhoods
BP GO:0090150 establishment of protein localization to membrane IEP Predict GO terms from Neighborhoods
BP GO:0090181 regulation of cholesterol metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0097242 amyloid-beta clearance IEP Predict GO terms from Neighborhoods
BP GO:0097502 mannosylation IEP Predict GO terms from Neighborhoods
CC GO:0097708 intracellular vesicle IEP Predict GO terms from Neighborhoods
CC GO:0098563 intrinsic component of synaptic vesicle membrane IEP Predict GO terms from Neighborhoods
MF GO:0098631 cell adhesion mediator activity IEP Predict GO terms from Neighborhoods
MF GO:0098632 cell-cell adhesion mediator activity IEP Predict GO terms from Neighborhoods
MF GO:0098641 cadherin binding involved in cell-cell adhesion IEP Predict GO terms from Neighborhoods
BP GO:0098900 regulation of action potential IEP Predict GO terms from Neighborhoods
BP GO:0098901 regulation of cardiac muscle cell action potential IEP Predict GO terms from Neighborhoods
CC GO:0098993 anchored component of synaptic vesicle membrane IEP Predict GO terms from Neighborhoods
BP GO:0150093 amyloid-beta clearance by transcytosis IEP Predict GO terms from Neighborhoods
BP GO:1901141 regulation of lignin biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1901564 organonitrogen compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901566 organonitrogen compound biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1901661 quinone metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901663 quinone biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1902222 erythrose 4-phosphate/phosphoenolpyruvate family amino acid catabolic process IEP Predict GO terms from Neighborhoods
BP GO:1903830 magnesium ion transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:2000008 regulation of protein localization to cell surface IEP Predict GO terms from Neighborhoods
BP GO:2001135 regulation of endocytic recycling IEP Predict GO terms from Neighborhoods
BP GO:2001235 positive regulation of apoptotic signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:2001236 regulation of extrinsic apoptotic signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:2001238 positive regulation of extrinsic apoptotic signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:2001239 regulation of extrinsic apoptotic signaling pathway in absence of ligand IEP Predict GO terms from Neighborhoods
BP GO:2001241 positive regulation of extrinsic apoptotic signaling pathway in absence of ligand IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR025110 AMP-bd_C 454 529
IPR000873 AMP-dep_Synth/Lig 38 445
No external refs found!