Coexpression cluster: Cluster_169 (HCCA Clusters (HRR 50 & PCC 0.5))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0110165 cellular anatomical entity 84.54% (175/207) 0.49 0.0 0.0
GO:0005575 cellular_component 84.54% (175/207) 0.47 0.0 0.0
GO:0008150 biological_process 84.54% (175/207) 0.46 0.0 0.0
GO:0009987 cellular process 76.33% (158/207) 0.55 0.0 0.0
GO:0003674 molecular_function 82.61% (171/207) 0.47 0.0 0.0
GO:0050896 response to stimulus 61.35% (127/207) 0.66 0.0 0.0
GO:0016020 membrane 49.28% (102/207) 0.81 0.0 0.0
GO:0031224 intrinsic component of membrane 24.15% (50/207) 1.4 0.0 0.0
GO:0050366 tyramine N-feruloyltransferase activity 1.93% (4/207) 7.56 0.0 0.0
GO:0042221 response to chemical 43.48% (90/207) 0.83 0.0 0.0
GO:0031984 organelle subcompartment 12.56% (26/207) 2.04 0.0 0.0
GO:0015085 calcium ion transmembrane transporter activity 4.83% (10/207) 3.85 0.0 1e-06
GO:0033692 cellular polysaccharide biosynthetic process 6.76% (14/207) 3.02 0.0 1e-06
GO:0098791 Golgi apparatus subcompartment 10.14% (21/207) 2.25 0.0 1e-06
GO:0043231 intracellular membrane-bounded organelle 54.59% (113/207) 0.64 0.0 1e-06
GO:0005802 trans-Golgi network 9.18% (19/207) 2.36 0.0 1e-06
GO:0031300 intrinsic component of organelle membrane 6.76% (14/207) 2.9 0.0 1e-06
GO:0003824 catalytic activity 52.17% (108/207) 0.66 0.0 2e-06
GO:0043227 membrane-bounded organelle 54.59% (113/207) 0.63 0.0 2e-06
GO:0016740 transferase activity 30.43% (63/207) 1.01 0.0 2e-06
GO:0005976 polysaccharide metabolic process 10.14% (21/207) 2.13 0.0 3e-06
GO:0044264 cellular polysaccharide metabolic process 8.21% (17/207) 2.42 0.0 3e-06
GO:0043207 response to external biotic stimulus 31.4% (65/207) 0.97 0.0 4e-06
GO:0051707 response to other organism 29.95% (62/207) 1.0 0.0 4e-06
GO:0044419 biological process involved in interspecies interaction between organisms 30.43% (63/207) 0.98 0.0 4e-06
GO:0000271 polysaccharide biosynthetic process 6.76% (14/207) 2.73 0.0 4e-06
GO:0034637 cellular carbohydrate biosynthetic process 6.76% (14/207) 2.71 0.0 4e-06
GO:0005515 protein binding 56.52% (117/207) 0.58 0.0 4e-06
GO:0009969 xyloglucan biosynthetic process 2.42% (5/207) 5.56 0.0 5e-06
GO:0050789 regulation of biological process 51.69% (107/207) 0.62 0.0 5e-06
GO:0009607 response to biotic stimulus 31.4% (65/207) 0.95 0.0 5e-06
GO:1901700 response to oxygen-containing compound 31.4% (65/207) 0.94 0.0 5e-06
GO:0016758 hexosyltransferase activity 8.7% (18/207) 2.24 0.0 6e-06
GO:0016757 glycosyltransferase activity 9.66% (20/207) 2.07 0.0 7e-06
GO:0043229 intracellular organelle 57.97% (120/207) 0.54 0.0 1e-05
GO:0065007 biological regulation 54.59% (113/207) 0.57 0.0 1e-05
GO:0031164 contractile vacuolar membrane 2.9% (6/207) 4.69 0.0 1e-05
GO:0016051 carbohydrate biosynthetic process 7.73% (16/207) 2.35 0.0 1.1e-05
GO:0043226 organelle 57.97% (120/207) 0.53 0.0 1.3e-05
GO:0070588 calcium ion transmembrane transport 3.86% (8/207) 3.72 0.0 1.5e-05
GO:0006816 calcium ion transport 4.35% (9/207) 3.37 0.0 1.8e-05
GO:0010035 response to inorganic substance 21.74% (45/207) 1.15 0.0 2e-05
GO:0030054 cell junction 20.77% (43/207) 1.16 0.0 2.7e-05
GO:0009605 response to external stimulus 34.78% (72/207) 0.8 0.0 2.7e-05
GO:0044237 cellular metabolic process 50.72% (105/207) 0.58 0.0 2.8e-05
GO:0006874 cellular calcium ion homeostasis 3.86% (8/207) 3.55 0.0 2.9e-05
GO:0016021 integral component of membrane 18.84% (39/207) 1.23 0.0 3e-05
GO:0009266 response to temperature stimulus 16.43% (34/207) 1.35 0.0 3e-05
GO:0031090 organelle membrane 25.6% (53/207) 1.0 1e-06 3e-05
GO:0070161 anchoring junction 18.84% (39/207) 1.22 1e-06 3.2e-05
GO:0031301 integral component of organelle membrane 5.31% (11/207) 2.81 1e-06 3.6e-05
GO:0005886 plasma membrane 26.57% (55/207) 0.96 1e-06 3.6e-05
GO:0000139 Golgi membrane 7.25% (15/207) 2.27 1e-06 3.7e-05
GO:0009506 plasmodesma 18.36% (38/207) 1.23 1e-06 3.7e-05
GO:0098588 bounding membrane of organelle 18.36% (38/207) 1.23 1e-06 3.8e-05
GO:0008152 metabolic process 56.52% (117/207) 0.51 1e-06 3.9e-05
GO:0070592 cell wall polysaccharide biosynthetic process 4.35% (9/207) 3.17 1e-06 4.4e-05
GO:0071554 cell wall organization or biogenesis 11.59% (24/207) 1.62 1e-06 6.1e-05
GO:0005911 cell-cell junction 18.36% (38/207) 1.2 1e-06 6.1e-05
GO:0072503 cellular divalent inorganic cation homeostasis 3.86% (8/207) 3.36 1e-06 6.2e-05
GO:0006950 response to stress 43.48% (90/207) 0.64 1e-06 6.3e-05
GO:0044038 cell wall macromolecule biosynthetic process 4.35% (9/207) 3.08 1e-06 6.6e-05
GO:0070589 cellular component macromolecule biosynthetic process 4.35% (9/207) 3.08 1e-06 6.6e-05
GO:0009409 response to cold 12.56% (26/207) 1.52 2e-06 7.3e-05
GO:0010383 cell wall polysaccharide metabolic process 5.31% (11/207) 2.65 2e-06 8.3e-05
GO:0005488 binding 66.18% (137/207) 0.4 2e-06 8.6e-05
GO:0009628 response to abiotic stimulus 32.85% (68/207) 0.78 2e-06 8.7e-05
GO:0050794 regulation of cellular process 44.44% (92/207) 0.61 2e-06 9.5e-05
GO:0006952 defense response 25.6% (53/207) 0.92 2e-06 0.000102
GO:0055074 calcium ion homeostasis 3.86% (8/207) 3.23 3e-06 0.000107
GO:0044036 cell wall macromolecule metabolic process 5.8% (12/207) 2.41 3e-06 0.000135
GO:0044262 cellular carbohydrate metabolic process 8.21% (17/207) 1.91 4e-06 0.000144
GO:0098542 defense response to other organism 22.22% (46/207) 1.0 4e-06 0.000144
GO:0016310 phosphorylation 13.04% (27/207) 1.4 4e-06 0.00016
GO:0005768 endosome 10.63% (22/207) 1.6 4e-06 0.000161
GO:0005975 carbohydrate metabolic process 11.59% (24/207) 1.52 4e-06 0.000162
GO:0010410 hemicellulose metabolic process 4.35% (9/207) 2.85 5e-06 0.000194
GO:0005262 calcium channel activity 2.9% (6/207) 3.77 6e-06 0.000209
GO:0006793 phosphorus metabolic process 18.36% (38/207) 1.1 6e-06 0.00022
GO:0031226 intrinsic component of plasma membrane 6.76% (14/207) 2.09 6e-06 0.000222
GO:0030073 insulin secretion 1.93% (4/207) 5.04 6e-06 0.000222
GO:0042546 cell wall biogenesis 5.8% (12/207) 2.32 6e-06 0.000223
GO:0071704 organic substance metabolic process 52.17% (108/207) 0.5 6e-06 0.000224
GO:0006875 cellular metal ion homeostasis 5.31% (11/207) 2.46 6e-06 0.000225
GO:0016772 transferase activity, transferring phosphorus-containing groups 14.49% (30/207) 1.28 7e-06 0.000225
GO:0010033 response to organic substance 30.92% (64/207) 0.77 6e-06 0.000226
GO:0009250 glucan biosynthetic process 3.86% (8/207) 3.04 7e-06 0.000231
GO:0010411 xyloglucan metabolic process 2.9% (6/207) 3.7 7e-06 0.000243
GO:0031166 integral component of vacuolar membrane 1.45% (3/207) 6.15 8e-06 0.000255
GO:0031310 intrinsic component of vacuolar membrane 1.45% (3/207) 6.15 8e-06 0.000255
GO:0071627 integral component of fungal-type vacuolar membrane 1.45% (3/207) 6.15 8e-06 0.000255
GO:0071628 intrinsic component of fungal-type vacuolar membrane 1.45% (3/207) 6.15 8e-06 0.000255
GO:0016301 kinase activity 13.53% (28/207) 1.32 8e-06 0.00026
GO:0006073 cellular glucan metabolic process 5.31% (11/207) 2.42 8e-06 0.00026
GO:0005388 P-type calcium transporter activity 1.93% (4/207) 4.92 9e-06 0.000275
GO:0044042 glucan metabolic process 5.31% (11/207) 2.4 9e-06 0.000287
GO:0004672 protein kinase activity 12.08% (25/207) 1.4 1e-05 0.000304
GO:0002790 peptide secretion 1.93% (4/207) 4.75 1.4e-05 0.000422
GO:0030072 peptide hormone secretion 1.93% (4/207) 4.75 1.4e-05 0.000422
GO:0046873 metal ion transmembrane transporter activity 5.31% (11/207) 2.32 1.5e-05 0.000446
GO:0042626 ATPase-coupled transmembrane transporter activity 4.35% (9/207) 2.65 1.5e-05 0.00045
GO:0006811 ion transport 10.63% (22/207) 1.48 1.6e-05 0.000467
GO:0046879 hormone secretion 1.93% (4/207) 4.7 1.6e-05 0.000469
GO:0005509 calcium ion binding 4.83% (10/207) 2.42 2.2e-05 0.000613
GO:1901564 organonitrogen compound metabolic process 34.3% (71/207) 0.66 2.3e-05 0.000638
GO:0047251 thiohydroximate beta-D-glucosyltransferase activity 0.97% (2/207) 7.56 2.8e-05 0.000778
GO:0032502 developmental process 40.1% (83/207) 0.57 2.9e-05 0.000805
GO:0006812 cation transport 7.73% (16/207) 1.73 3.1e-05 0.00086
GO:0072507 divalent inorganic cation homeostasis 3.86% (8/207) 2.72 3.4e-05 0.000921
GO:0006468 protein phosphorylation 10.63% (22/207) 1.4 3.5e-05 0.000933
GO:0055065 metal ion homeostasis 6.28% (13/207) 1.95 4e-05 0.001059
GO:0016773 phosphotransferase activity, alcohol group as acceptor 12.08% (25/207) 1.28 4.2e-05 0.001115
GO:0034645 cellular macromolecule biosynthetic process 7.73% (16/207) 1.68 4.9e-05 0.001269
GO:0051234 establishment of localization 21.26% (44/207) 0.87 4.9e-05 0.001276
GO:0098655 cation transmembrane transport 5.8% (12/207) 2.0 5.5e-05 0.001413
GO:0032401 establishment of melanosome localization 1.93% (4/207) 4.24 6e-05 0.001455
GO:0032402 melanosome transport 1.93% (4/207) 4.24 6e-05 0.001455
GO:0051904 pigment granule transport 1.93% (4/207) 4.24 6e-05 0.001455
GO:0051905 establishment of pigment granule localization 1.93% (4/207) 4.24 6e-05 0.001455
GO:0010183 pollen tube guidance 3.38% (7/207) 2.85 5.8e-05 0.001473
GO:0050918 positive chemotaxis 3.38% (7/207) 2.85 5.8e-05 0.001473
GO:0006796 phosphate-containing compound metabolic process 16.91% (35/207) 1.0 5.9e-05 0.001484
GO:0031225 anchored component of membrane 4.83% (10/207) 2.23 6.3e-05 0.001509
GO:0030001 metal ion transport 6.28% (13/207) 1.88 6.5e-05 0.001544
GO:0019829 ATPase-coupled cation transmembrane transporter activity 2.42% (5/207) 3.58 6.5e-05 0.001549
GO:0010310 regulation of hydrogen peroxide metabolic process 2.42% (5/207) 3.54 7.3e-05 0.001692
GO:0032400 melanosome localization 1.93% (4/207) 4.17 7.3e-05 0.001698
GO:0051875 pigment granule localization 1.93% (4/207) 4.17 7.3e-05 0.001698
GO:0052546 cell wall pectin metabolic process 2.9% (6/207) 3.1 7.7e-05 0.001766
GO:0051179 localization 23.19% (48/207) 0.8 8.1e-05 0.001837
GO:0043621 protein self-association 5.31% (11/207) 2.05 8.3e-05 0.001866
GO:0031410 cytoplasmic vesicle 12.08% (25/207) 1.21 8.6e-05 0.001927
GO:0050826 response to freezing 3.38% (7/207) 2.76 8.7e-05 0.00193
GO:0033356 UDP-L-arabinose metabolic process 1.45% (3/207) 5.06 9.4e-05 0.002077
GO:0009306 protein secretion 2.42% (5/207) 3.46 9.8e-05 0.002088
GO:0035592 establishment of protein localization to extracellular region 2.42% (5/207) 3.46 9.8e-05 0.002088
GO:0071692 protein localization to extracellular region 2.42% (5/207) 3.46 9.8e-05 0.002088
GO:0071497 cellular response to freezing 1.93% (4/207) 4.07 9.6e-05 0.0021
GO:0018108 peptidyl-tyrosine phosphorylation 2.42% (5/207) 3.42 0.000109 0.002295
GO:0018212 peptidyl-tyrosine modification 2.42% (5/207) 3.42 0.000109 0.002295
GO:0044281 small molecule metabolic process 18.36% (38/207) 0.91 0.000113 0.002366
GO:0030659 cytoplasmic vesicle membrane 6.28% (13/207) 1.79 0.000115 0.002388
GO:0048856 anatomical structure development 30.92% (64/207) 0.63 0.000117 0.002406
GO:0030003 cellular cation homeostasis 5.31% (11/207) 1.99 0.000121 0.002474
GO:0097708 intracellular vesicle 12.08% (25/207) 1.17 0.000133 0.002716
GO:0009832 plant-type cell wall biogenesis 4.35% (9/207) 2.24 0.000141 0.00285
GO:0009620 response to fungus 12.56% (26/207) 1.14 0.000142 0.002861
GO:0009408 response to heat 7.73% (16/207) 1.54 0.000145 0.0029
GO:0015399 primary active transmembrane transporter activity 4.35% (9/207) 2.23 0.000147 0.002911
GO:0015662 P-type ion transporter activity 1.93% (4/207) 3.89 0.000157 0.003072
GO:0140358 P-type transmembrane transporter activity 1.93% (4/207) 3.89 0.000157 0.003072
GO:0033843 xyloglucan 6-xylosyltransferase activity 0.97% (2/207) 6.56 0.000166 0.003128
GO:0045140 inositol phosphoceramide synthase activity 0.97% (2/207) 6.56 0.000166 0.003128
GO:0004478 methionine adenosyltransferase activity 0.97% (2/207) 6.56 0.000166 0.003128
GO:0006556 S-adenosylmethionine biosynthetic process 0.97% (2/207) 6.56 0.000166 0.003128
GO:0006810 transport 19.81% (41/207) 0.84 0.000168 0.003131
GO:0008194 UDP-glycosyltransferase activity 5.8% (12/207) 1.83 0.000164 0.003184
GO:0034605 cellular response to heat 3.86% (8/207) 2.39 0.000166 0.003209
GO:0019722 calcium-mediated signaling 2.9% (6/207) 2.88 0.00018 0.003316
GO:0012506 vesicle membrane 6.28% (13/207) 1.73 0.000179 0.003329
GO:0106310 protein serine kinase activity 4.83% (10/207) 2.03 0.000192 0.003517
GO:0007165 signal transduction 18.84% (39/207) 0.85 0.000194 0.003534
GO:0006873 cellular ion homeostasis 5.31% (11/207) 1.91 0.000195 0.00354
GO:0009755 hormone-mediated signaling pathway 10.63% (22/207) 1.23 0.000198 0.003574
GO:0070417 cellular response to cold 3.38% (7/207) 2.55 0.00021 0.00374
GO:1901135 carbohydrate derivative metabolic process 10.63% (22/207) 1.22 0.00021 0.003752
GO:0009414 response to water deprivation 10.63% (22/207) 1.22 0.000213 0.003765
GO:0080134 regulation of response to stress 15.46% (32/207) 0.96 0.000222 0.0039
GO:0035639 purine ribonucleoside triphosphate binding 12.56% (26/207) 1.09 0.000223 0.0039
GO:0002831 regulation of response to biotic stimulus 10.14% (21/207) 1.24 0.000241 0.004182
GO:0030173 integral component of Golgi membrane 1.93% (4/207) 3.73 0.000242 0.004183
GO:0005774 vacuolar membrane 11.11% (23/207) 1.17 0.000256 0.004399
GO:0033188 sphingomyelin synthase activity 0.97% (2/207) 6.24 0.000276 0.004634
GO:0047493 ceramide cholinephosphotransferase activity 0.97% (2/207) 6.24 0.000276 0.004634
GO:0046364 monosaccharide biosynthetic process 2.42% (5/207) 3.14 0.000272 0.004647
GO:0045488 pectin metabolic process 4.35% (9/207) 2.11 0.000275 0.004662
GO:0022804 active transmembrane transporter activity 6.76% (14/207) 1.58 0.000286 0.004764
GO:0098662 inorganic cation transmembrane transport 4.83% (10/207) 1.96 0.000296 0.004891
GO:0040011 locomotion 4.35% (9/207) 2.09 0.000296 0.004906
GO:0010393 galacturonan metabolic process 4.35% (9/207) 2.08 0.000312 0.005124
GO:0005261 cation channel activity 2.9% (6/207) 2.73 0.000316 0.005153
GO:0050793 regulation of developmental process 19.32% (40/207) 0.81 0.000318 0.005166
GO:0098771 inorganic ion homeostasis 6.76% (14/207) 1.56 0.000327 0.005274
GO:0001101 response to acid chemical 11.11% (23/207) 1.14 0.00033 0.005297
GO:0140096 catalytic activity, acting on a protein 18.36% (38/207) 0.83 0.000335 0.005353
GO:0016760 cellulose synthase (UDP-forming) activity 1.45% (3/207) 4.45 0.000348 0.005523
GO:0009225 nucleotide-sugar metabolic process 1.93% (4/207) 3.58 0.000356 0.005628
GO:1900459 positive regulation of brassinosteroid mediated signaling pathway 2.42% (5/207) 3.05 0.000365 0.005732
GO:0009415 response to water 10.63% (22/207) 1.16 0.000372 0.00581
GO:0050801 ion homeostasis 7.25% (15/207) 1.47 0.000381 0.005915
GO:0044085 cellular component biogenesis 5.8% (12/207) 1.7 0.000385 0.005952
GO:0010289 homogalacturonan biosynthetic process 1.45% (3/207) 4.39 0.00039 0.005995
GO:0045229 external encapsulating structure organization 8.7% (18/207) 1.3 0.000426 0.006486
GO:0031228 intrinsic component of Golgi membrane 1.93% (4/207) 3.52 0.000426 0.006516
GO:0055080 cation homeostasis 6.28% (13/207) 1.59 0.000444 0.006723
GO:1900457 regulation of brassinosteroid mediated signaling pathway 2.9% (6/207) 2.63 0.000453 0.006789
GO:0023061 signal release 1.93% (4/207) 3.49 0.000451 0.006796
GO:0005996 monosaccharide metabolic process 3.38% (7/207) 2.36 0.000468 0.006984
GO:0031347 regulation of defense response 11.11% (23/207) 1.11 0.000471 0.00699
GO:0030176 integral component of endoplasmic reticulum membrane 2.42% (5/207) 2.96 0.00048 0.007082
GO:0036211 protein modification process 17.87% (37/207) 0.81 0.000503 0.007393
GO:0005887 integral component of plasma membrane 3.86% (8/207) 2.14 0.000522 0.007632
GO:0016759 cellulose synthase activity 1.45% (3/207) 4.24 0.000535 0.007779
GO:0031982 vesicle 12.08% (25/207) 1.03 0.000545 0.007893
GO:0015075 ion transmembrane transporter activity 7.73% (16/207) 1.36 0.000558 0.008042
GO:0042353 fucose biosynthetic process 0.97% (2/207) 5.75 0.000576 0.008256
GO:0032101 regulation of response to external stimulus 10.63% (22/207) 1.11 0.000581 0.00829
GO:0010394 homogalacturonan metabolic process 1.45% (3/207) 4.19 0.00059 0.008373
GO:0048519 negative regulation of biological process 24.15% (50/207) 0.65 0.000598 0.00845
GO:0031227 intrinsic component of endoplasmic reticulum membrane 2.42% (5/207) 2.87 0.000642 0.009025
GO:0008378 galactosyltransferase activity 1.93% (4/207) 3.35 0.000658 0.009207
GO:0009504 cell plate 2.42% (5/207) 2.86 0.000665 0.009258
GO:0032555 purine ribonucleotide binding 12.56% (26/207) 0.99 0.0007 0.009702
GO:0034220 ion transmembrane transport 6.76% (14/207) 1.45 0.000705 0.009734
GO:0048229 gametophyte development 7.25% (15/207) 1.39 0.000711 0.009762
GO:0017076 purine nucleotide binding 12.56% (26/207) 0.98 0.000769 0.010413
GO:0035773 insulin secretion involved in cellular response to glucose stimulus 0.97% (2/207) 5.56 0.000765 0.010414
GO:0052691 UDP-arabinopyranose mutase activity 0.97% (2/207) 5.56 0.000765 0.010414
GO:0009719 response to endogenous stimulus 19.81% (41/207) 0.72 0.000848 0.011428
GO:0051286 cell tip 3.38% (7/207) 2.21 0.000878 0.011787
GO:0060001 minus-end directed microfilament motor activity 0.97% (2/207) 5.39 0.00098 0.013101
GO:0005524 ATP binding 10.63% (22/207) 1.06 0.00099 0.013166
GO:0048878 chemical homeostasis 10.14% (21/207) 1.08 0.001013 0.01341
GO:0014070 response to organic cyclic compound 10.63% (22/207) 1.05 0.001035 0.013647
GO:0032553 ribonucleotide binding 12.56% (26/207) 0.95 0.001041 0.013666
GO:0032580 Golgi cisterna membrane 1.45% (3/207) 3.9 0.001077 0.014074
GO:0055082 cellular chemical homeostasis 5.31% (11/207) 1.61 0.001084 0.014105
GO:0009864 induced systemic resistance, jasmonic acid mediated signaling pathway 1.93% (4/207) 3.15 0.001106 0.014331
GO:0060187 cell pole 3.38% (7/207) 2.14 0.001135 0.014642
GO:0022890 inorganic cation transmembrane transporter activity 5.31% (11/207) 1.6 0.001149 0.014758
GO:0006790 sulfur compound metabolic process 7.25% (15/207) 1.32 0.001165 0.014895
GO:0045054 constitutive secretory pathway 0.97% (2/207) 5.24 0.001221 0.014965
GO:0007427 epithelial cell migration, open tracheal system 0.97% (2/207) 5.24 0.001221 0.014965
GO:0031585 regulation of inositol 1,4,5-trisphosphate-sensitive calcium-release channel activity 0.97% (2/207) 5.24 0.001221 0.014965
GO:0031987 locomotion involved in locomotory behavior 0.97% (2/207) 5.24 0.001221 0.014965
GO:0032593 insulin-responsive compartment 0.97% (2/207) 5.24 0.001221 0.014965
GO:0051686 establishment of ER localization 0.97% (2/207) 5.24 0.001221 0.014965
GO:0099089 establishment of endoplasmic reticulum localization to postsynapse 0.97% (2/207) 5.24 0.001221 0.014965
GO:0099566 regulation of postsynaptic cytosolic calcium ion concentration 0.97% (2/207) 5.24 0.001221 0.014965
GO:0019932 second-messenger-mediated signaling 2.9% (6/207) 2.36 0.00118 0.015025
GO:0010038 response to metal ion 9.18% (19/207) 1.13 0.001244 0.015175
GO:0018958 phenol-containing compound metabolic process 3.38% (7/207) 2.13 0.001203 0.015241
GO:1901698 response to nitrogen compound 10.14% (21/207) 1.06 0.00129 0.015611
GO:0019538 protein metabolic process 21.26% (44/207) 0.66 0.001285 0.015613
GO:1990110 callus formation 2.42% (5/207) 2.64 0.001299 0.015661
GO:0005216 ion channel activity 2.9% (6/207) 2.32 0.001385 0.016556
GO:0009617 response to bacterium 12.08% (25/207) 0.94 0.00138 0.016568
GO:0005516 calmodulin binding 3.86% (8/207) 1.92 0.001401 0.016615
GO:0032501 multicellular organismal process 26.57% (55/207) 0.56 0.001397 0.016638
GO:0008324 cation transmembrane transporter activity 5.8% (12/207) 1.48 0.001449 0.017114
GO:0033572 transferrin transport 0.97% (2/207) 5.1 0.001487 0.017362
GO:0005432 calcium:sodium antiporter activity 0.97% (2/207) 5.1 0.001487 0.017362
GO:0008080 N-acetyltransferase activity 1.93% (4/207) 3.04 0.001484 0.017455
GO:0010417 glucuronoxylan biosynthetic process 1.45% (3/207) 3.72 0.001545 0.017967
GO:0016143 S-glycoside metabolic process 4.35% (9/207) 1.75 0.001587 0.018237
GO:0019757 glycosinolate metabolic process 4.35% (9/207) 1.75 0.001587 0.018237
GO:0019760 glucosinolate metabolic process 4.35% (9/207) 1.75 0.001587 0.018237
GO:0009611 response to wounding 8.21% (17/207) 1.17 0.001603 0.018346
GO:0048585 negative regulation of response to stimulus 11.11% (23/207) 0.97 0.001715 0.019554
GO:0010243 response to organonitrogen compound 9.18% (19/207) 1.09 0.001738 0.019743
GO:0019567 arabinose biosynthetic process 0.97% (2/207) 4.98 0.001779 0.019897
GO:0030318 melanocyte differentiation 0.97% (2/207) 4.98 0.001779 0.019897
GO:0031941 filamentous actin 0.97% (2/207) 4.98 0.001779 0.019897
GO:0010413 glucuronoxylan metabolic process 1.45% (3/207) 3.65 0.001763 0.019949
GO:0050832 defense response to fungus 8.21% (17/207) 1.16 0.001802 0.020083
GO:0097435 supramolecular fiber organization 3.86% (8/207) 1.86 0.001817 0.020174
GO:0006935 chemotaxis 3.38% (7/207) 2.02 0.001857 0.020542
GO:0006004 fucose metabolic process 1.45% (3/207) 3.62 0.001879 0.020703
GO:0005773 vacuole 9.18% (19/207) 1.07 0.001945 0.021273
GO:0051650 establishment of vesicle localization 1.93% (4/207) 2.93 0.001942 0.021321
GO:0005794 Golgi apparatus 8.21% (17/207) 1.14 0.001993 0.021722
GO:0071555 cell wall organization 6.76% (14/207) 1.29 0.002022 0.021869
GO:0051648 vesicle localization 1.93% (4/207) 2.92 0.002015 0.021875
GO:0060627 regulation of vesicle-mediated transport 3.86% (8/207) 1.83 0.002044 0.02203
GO:0044238 primary metabolic process 41.55% (86/207) 0.38 0.002081 0.022347
GO:0042438 melanin biosynthetic process 0.97% (2/207) 4.86 0.002095 0.022414
GO:0009738 abscisic acid-activated signaling pathway 3.86% (8/207) 1.81 0.002197 0.023421
GO:0140657 ATP-dependent activity 5.8% (12/207) 1.4 0.002216 0.023534
GO:0098660 inorganic ion transmembrane transport 4.83% (10/207) 1.57 0.002251 0.023826
GO:0097367 carbohydrate derivative binding 12.56% (26/207) 0.86 0.002279 0.024031
GO:0004674 protein serine/threonine kinase activity 7.73% (16/207) 1.16 0.002439 0.025268
GO:0033275 actin-myosin filament sliding 0.97% (2/207) 4.75 0.002436 0.025324
GO:0042476 odontogenesis 0.97% (2/207) 4.75 0.002436 0.025324
GO:0140027 contractile vacuole localization 0.97% (2/207) 4.75 0.002436 0.025324
GO:0042131 thiamine phosphate phosphatase activity 0.97% (2/207) 4.75 0.002436 0.025324
GO:0042330 taxis 3.38% (7/207) 1.94 0.002508 0.025898
GO:0090404 pollen tube tip 2.42% (5/207) 2.42 0.002538 0.025935
GO:0032559 adenyl ribonucleotide binding 10.63% (22/207) 0.95 0.002529 0.025936
GO:0051282 regulation of sequestering of calcium ion 1.45% (3/207) 3.47 0.002528 0.026012
GO:0043168 anion binding 14.49% (30/207) 0.78 0.002624 0.026626
GO:0048583 regulation of response to stimulus 20.77% (43/207) 0.62 0.002615 0.026633
GO:0030554 adenyl nucleotide binding 10.63% (22/207) 0.94 0.00269 0.027019
GO:0038023 signaling receptor activity 5.31% (11/207) 1.44 0.002689 0.027099
GO:0043170 macromolecule metabolic process 30.92% (64/207) 0.47 0.00268 0.027107
GO:0006582 melanin metabolic process 0.97% (2/207) 4.65 0.0028 0.027658
GO:0030050 vesicle transport along actin filament 0.97% (2/207) 4.65 0.0028 0.027658
GO:0032252 secretory granule localization 0.97% (2/207) 4.65 0.0028 0.027658
GO:0048820 hair follicle maturation 0.97% (2/207) 4.65 0.0028 0.027658
GO:0060151 peroxisome localization 0.97% (2/207) 4.65 0.0028 0.027658
GO:0043167 ion binding 26.09% (54/207) 0.52 0.00284 0.027951
GO:0140352 export from cell 3.86% (8/207) 1.75 0.002861 0.02807
GO:0071468 cellular response to acidic pH 0.97% (2/207) 4.56 0.003189 0.030579
GO:0019566 arabinose metabolic process 0.97% (2/207) 4.56 0.003189 0.030579
GO:0006591 ornithine metabolic process 0.97% (2/207) 4.56 0.003189 0.030579
GO:0070252 actin-mediated cell contraction 0.97% (2/207) 4.56 0.003189 0.030579
GO:0009228 thiamine biosynthetic process 0.97% (2/207) 4.56 0.003189 0.030579
GO:0019319 hexose biosynthetic process 1.45% (3/207) 3.36 0.003136 0.030663
GO:0046658 anchored component of plasma membrane 2.9% (6/207) 2.08 0.003172 0.030917
GO:0035838 growing cell tip 2.42% (5/207) 2.33 0.003367 0.032181
GO:0009059 macromolecule biosynthetic process 8.21% (17/207) 1.07 0.003466 0.032806
GO:0019318 hexose metabolic process 2.42% (5/207) 2.32 0.003444 0.03281
GO:0015318 inorganic molecular entity transmembrane transporter activity 5.8% (12/207) 1.32 0.003465 0.0329
GO:0016049 cell growth 8.7% (18/207) 1.03 0.003505 0.032964
GO:0046686 response to cadmium ion 5.8% (12/207) 1.32 0.003495 0.032976
GO:0055081 anion homeostasis 2.42% (5/207) 2.31 0.003523 0.033022
GO:0017157 regulation of exocytosis 1.93% (4/207) 2.69 0.003553 0.033206
GO:0006116 NADH oxidation 0.97% (2/207) 4.47 0.003602 0.033344
GO:0019322 pentose biosynthetic process 0.97% (2/207) 4.47 0.003602 0.033344
GO:0004888 transmembrane signaling receptor activity 3.38% (7/207) 1.85 0.00358 0.033353
GO:0009555 pollen development 5.31% (11/207) 1.38 0.003802 0.035083
GO:0099402 plant organ development 10.14% (21/207) 0.92 0.003817 0.035111
GO:0005634 nucleus 21.26% (44/207) 0.58 0.003885 0.035627
GO:0000146 microfilament motor activity 0.97% (2/207) 4.39 0.004038 0.036027
GO:0045179 apical cortex 0.97% (2/207) 4.39 0.004038 0.036027
GO:0050931 pigment cell differentiation 0.97% (2/207) 4.39 0.004038 0.036027
GO:0006772 thiamine metabolic process 0.97% (2/207) 4.39 0.004038 0.036027
GO:0046777 protein autophosphorylation 6.28% (13/207) 1.23 0.00397 0.036068
GO:0060089 molecular transducer activity 5.31% (11/207) 1.37 0.003945 0.03607
GO:0022853 active ion transmembrane transporter activity 3.86% (8/207) 1.67 0.003963 0.03612
GO:0035619 root hair tip 1.45% (3/207) 3.24 0.004012 0.03623
GO:0010192 mucilage biosynthetic process 1.93% (4/207) 2.64 0.004006 0.036285
GO:0042742 defense response to bacterium 8.7% (18/207) 1.01 0.004087 0.036353
GO:0051716 cellular response to stimulus 21.74% (45/207) 0.56 0.004252 0.037591
GO:0071669 plant-type cell wall organization or biogenesis 5.31% (11/207) 1.36 0.004245 0.037648
GO:0052325 cell wall pectin biosynthetic process 1.45% (3/207) 3.19 0.0044 0.038784
GO:1990837 sequence-specific double-stranded DNA binding 9.66% (20/207) 0.93 0.004464 0.039234
GO:0008514 organic anion transmembrane transporter activity 3.38% (7/207) 1.79 0.004511 0.039524
GO:0019725 cellular homeostasis 5.31% (11/207) 1.34 0.004688 0.040954
GO:0015267 channel activity 2.9% (6/207) 1.96 0.004729 0.04107
GO:0022803 passive transmembrane transporter activity 2.9% (6/207) 1.96 0.004729 0.04107
GO:0043412 macromolecule modification 18.36% (38/207) 0.62 0.00483 0.041831
GO:0005797 Golgi medial cisterna 0.97% (2/207) 4.24 0.00498 0.042503
GO:2001135 regulation of endocytic recycling 0.97% (2/207) 4.24 0.00498 0.042503
GO:0010631 epithelial cell migration 0.97% (2/207) 4.24 0.00498 0.042503
GO:0050145 nucleoside monophosphate kinase activity 0.97% (2/207) 4.24 0.00498 0.042503
GO:0016866 intramolecular transferase activity 1.45% (3/207) 3.12 0.005023 0.042746
GO:0042592 homeostatic process 10.14% (21/207) 0.89 0.004958 0.042813
GO:0060560 developmental growth involved in morphogenesis 7.73% (16/207) 1.05 0.005095 0.043234
GO:0010200 response to chitin 5.31% (11/207) 1.32 0.005166 0.043582
GO:0009725 response to hormone 17.39% (36/207) 0.63 0.00519 0.043662
GO:0051592 response to calcium ion 1.93% (4/207) 2.54 0.005163 0.043684
GO:0043947 obsolete positive regulation by host of symbiont catalytic activity 0.48% (1/207) 7.56 0.005296 0.043928
GO:0046566 DOPA dioxygenase activity 0.48% (1/207) 7.56 0.005296 0.043928
GO:0050297 stizolobate synthase activity 0.48% (1/207) 7.56 0.005296 0.043928
GO:0006486 protein glycosylation 2.42% (5/207) 2.18 0.005261 0.044014
GO:0043413 macromolecule glycosylation 2.42% (5/207) 2.18 0.005261 0.044014
GO:0001881 receptor recycling 0.97% (2/207) 4.17 0.005485 0.044869
GO:1902307 positive regulation of sodium ion transmembrane transport 0.97% (2/207) 4.17 0.005485 0.044869
GO:0015368 calcium:cation antiporter activity 0.97% (2/207) 4.17 0.005485 0.044869
GO:0051668 localization within membrane 3.86% (8/207) 1.6 0.00543 0.044919
GO:0010030 positive regulation of seed germination 1.93% (4/207) 2.52 0.005447 0.044932
GO:0055085 transmembrane transport 8.21% (17/207) 1.0 0.005577 0.045493
GO:0098993 anchored component of synaptic vesicle membrane 0.97% (2/207) 4.1 0.006013 0.048645
GO:0042641 actomyosin 0.97% (2/207) 4.1 0.006013 0.048645
GO:0099515 actin filament-based transport 0.97% (2/207) 4.1 0.006013 0.048645
GO:0030865 cortical cytoskeleton organization 2.42% (5/207) 2.13 0.006033 0.048674
GO:0030427 site of polarized growth 2.9% (6/207) 1.88 0.006196 0.049856
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_205 0.008 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_252 0.009 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_6 0.01 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_99 0.008 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_138 0.008 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_156 0.009 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_161 0.007 Orthogroups with 8 Potato genotypes Compare
Sequences (207) (download table)

InterPro Domains

GO Terms

Family Terms