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  5. SOLTUB.AGRIA.G00000012496

SOLTUB.AGRIA.G00000012496


Description : Down syndrome critical region protein, putative


Gene families : OG_02_0004506 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000012496
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_197


Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA AHRD
BP GO:0032456 endocytic recycling IEA AHRD
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Type GO Term Name Evidence Source
BP GO:0000086 G2/M transition of mitotic cell cycle IEP Predict GO terms from Neighborhoods
CC GO:0000178 exosome (RNase complex) IEP Predict GO terms from Neighborhoods
BP GO:0000290 deadenylation-dependent decapping of nuclear-transcribed mRNA IEP Predict GO terms from Neighborhoods
BP GO:0000291 nuclear-transcribed mRNA catabolic process, exonucleolytic IEP Predict GO terms from Neighborhoods
CC GO:0000347 THO complex IEP Predict GO terms from Neighborhoods
BP GO:0000373 Group II intron splicing IEP Predict GO terms from Neighborhoods
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predict GO terms from Neighborhoods
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predict GO terms from Neighborhoods
BP GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation IEP Predict GO terms from Neighborhoods
BP GO:0000460 maturation of 5.8S rRNA IEP Predict GO terms from Neighborhoods
CC GO:0000803 sex chromosome IEP Predict GO terms from Neighborhoods
MF GO:0001163 RNA polymerase I transcription regulatory region sequence-specific DNA binding IEP Predict GO terms from Neighborhoods
MF GO:0001164 RNA polymerase I core promoter sequence-specific DNA binding IEP Predict GO terms from Neighborhoods
MF GO:0001530 lipopolysaccharide binding IEP Predict GO terms from Neighborhoods
CC GO:0001741 XY body IEP Predict GO terms from Neighborhoods
BP GO:0001745 compound eye morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0001835 blastocyst hatching IEP Predict GO terms from Neighborhoods
BP GO:0001919 regulation of receptor recycling IEP Predict GO terms from Neighborhoods
BP GO:0002119 nematode larval development IEP Predict GO terms from Neighborhoods
BP GO:0002164 larval development IEP Predict GO terms from Neighborhoods
MF GO:0003712 transcription coregulator activity IEP Predict GO terms from Neighborhoods
MF GO:0003723 RNA binding IEP Predict GO terms from Neighborhoods
MF GO:0003886 DNA (cytosine-5-)-methyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0004311 farnesyltranstransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0004532 exoribonuclease activity IEP Predict GO terms from Neighborhoods
MF GO:0004534 5'-3' exoribonuclease activity IEP Predict GO terms from Neighborhoods
MF GO:0004659 prenyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0004660 protein farnesyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0004661 protein geranylgeranyltransferase activity IEP Predict GO terms from Neighborhoods
CC GO:0005654 nucleoplasm IEP Predict GO terms from Neighborhoods
CC GO:0005689 U12-type spliceosomal complex IEP Predict GO terms from Neighborhoods
CC GO:0005929 cilium IEP Predict GO terms from Neighborhoods
CC GO:0005965 protein farnesyltransferase complex IEP Predict GO terms from Neighborhoods
BP GO:0006139 nucleobase-containing compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006325 chromatin organization IEP Predict GO terms from Neighborhoods
BP GO:0006337 nucleosome disassembly IEP Predict GO terms from Neighborhoods
BP GO:0006338 chromatin remodeling IEP Predict GO terms from Neighborhoods
BP GO:0006354 DNA-templated transcription elongation IEP Predict GO terms from Neighborhoods
BP GO:0006356 regulation of transcription by RNA polymerase I IEP Predict GO terms from Neighborhoods
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Predict GO terms from Neighborhoods
BP GO:0006368 transcription elongation by RNA polymerase II promoter IEP Predict GO terms from Neighborhoods
BP GO:0006388 tRNA splicing, via endonucleolytic cleavage and ligation IEP Predict GO terms from Neighborhoods
BP GO:0006396 RNA processing IEP Predict GO terms from Neighborhoods
BP GO:0006397 mRNA processing IEP Predict GO terms from Neighborhoods
BP GO:0006725 cellular aromatic compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0007094 mitotic spindle assembly checkpoint signaling IEP Predict GO terms from Neighborhoods
BP GO:0007365 periodic partitioning IEP Predict GO terms from Neighborhoods
BP GO:0007367 segment polarity determination IEP Predict GO terms from Neighborhoods
BP GO:0008285 negative regulation of cell population proliferation IEP Predict GO terms from Neighborhoods
MF GO:0008318 protein prenyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0008334 histone mRNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0008380 RNA splicing IEP Predict GO terms from Neighborhoods
MF GO:0008409 5'-3' exonuclease activity IEP Predict GO terms from Neighborhoods
MF GO:0009008 DNA-methyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0009788 negative regulation of abscisic acid-activated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0009891 positive regulation of biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0010072 primary shoot apical meristem specification IEP Predict GO terms from Neighborhoods
BP GO:0010468 regulation of gene expression IEP Predict GO terms from Neighborhoods
BP GO:0010557 positive regulation of macromolecule biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0010604 positive regulation of macromolecule metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0010639 negative regulation of organelle organization IEP Predict GO terms from Neighborhoods
BP GO:0016032 viral process IEP Predict GO terms from Neighborhoods
BP GO:0016070 RNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0016071 mRNA metabolic process IEP Predict GO terms from Neighborhoods
CC GO:0016442 RISC complex IEP Predict GO terms from Neighborhoods
BP GO:0016458 obsolete gene silencing IEP Predict GO terms from Neighborhoods
CC GO:0016514 SWI/SNF complex IEP Predict GO terms from Neighborhoods
CC GO:0016586 RSC-type complex IEP Predict GO terms from Neighborhoods
CC GO:0016592 mediator complex IEP Predict GO terms from Neighborhoods
CC GO:0016607 nuclear speck IEP Predict GO terms from Neighborhoods
MF GO:0016896 exoribonuclease activity, producing 5'-phosphomonoesters IEP Predict GO terms from Neighborhoods
BP GO:0018342 protein prenylation IEP Predict GO terms from Neighborhoods
BP GO:0018343 protein farnesylation IEP Predict GO terms from Neighborhoods
BP GO:0019079 viral genome replication IEP Predict GO terms from Neighborhoods
BP GO:0019083 viral transcription IEP Predict GO terms from Neighborhoods
BP GO:0019222 regulation of metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0019577 aldaric acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0019579 aldaric acid catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0022411 cellular component disassembly IEP Predict GO terms from Neighborhoods
CC GO:0030017 sarcomere IEP Predict GO terms from Neighborhoods
BP GO:0030030 cell projection organization IEP Predict GO terms from Neighborhoods
MF GO:0030695 GTPase regulator activity IEP Predict GO terms from Neighborhoods
BP GO:0031055 chromatin remodeling at centromere IEP Predict GO terms from Neighborhoods
BP GO:0031061 negative regulation of histone methylation IEP Predict GO terms from Neighborhoods
BP GO:0031087 deadenylation-independent decapping of nuclear-transcribed mRNA IEP Predict GO terms from Neighborhoods
CC GO:0031332 RNAi effector complex IEP Predict GO terms from Neighborhoods
BP GO:0031426 polycistronic mRNA processing IEP Predict GO terms from Neighborhoods
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP Predict GO terms from Neighborhoods
CC GO:0031463 Cul3-RING ubiquitin ligase complex IEP Predict GO terms from Neighborhoods
BP GO:0031577 spindle checkpoint signaling IEP Predict GO terms from Neighborhoods
BP GO:0032205 negative regulation of telomere maintenance IEP Predict GO terms from Neighborhoods
BP GO:0032210 regulation of telomere maintenance via telomerase IEP Predict GO terms from Neighborhoods
BP GO:0032211 negative regulation of telomere maintenance via telomerase IEP Predict GO terms from Neighborhoods
BP GO:0032527 protein exit from endoplasmic reticulum IEP Predict GO terms from Neighborhoods
BP GO:0032984 protein-containing complex disassembly IEP Predict GO terms from Neighborhoods
BP GO:0032986 protein-DNA complex disassembly IEP Predict GO terms from Neighborhoods
CC GO:0032991 protein-containing complex IEP Predict GO terms from Neighborhoods
BP GO:0033044 regulation of chromosome organization IEP Predict GO terms from Neighborhoods
BP GO:0033046 negative regulation of sister chromatid segregation IEP Predict GO terms from Neighborhoods
BP GO:0033048 negative regulation of mitotic sister chromatid segregation IEP Predict GO terms from Neighborhoods
BP GO:0033262 regulation of nuclear cell cycle DNA replication IEP Predict GO terms from Neighborhoods
BP GO:0034499 late endosome to Golgi transport IEP Predict GO terms from Neighborhoods
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0034728 nucleosome organization IEP Predict GO terms from Neighborhoods
BP GO:0035066 positive regulation of histone acetylation IEP Predict GO terms from Neighborhoods
BP GO:0035188 hatching IEP Predict GO terms from Neighborhoods
BP GO:0039692 single stranded viral RNA replication via double stranded DNA intermediate IEP Predict GO terms from Neighborhoods
BP GO:0039694 viral RNA genome replication IEP Predict GO terms from Neighborhoods
BP GO:0040039 inductive cell migration IEP Predict GO terms from Neighborhoods
BP GO:0042060 wound healing IEP Predict GO terms from Neighborhoods
BP GO:0042308 negative regulation of protein import into nucleus IEP Predict GO terms from Neighborhoods
CC GO:0042995 cell projection IEP Predict GO terms from Neighborhoods
CC GO:0043005 neuron projection IEP Predict GO terms from Neighborhoods
BP GO:0043170 macromolecule metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0043649 dicarboxylic acid catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0043923 positive regulation by host of viral transcription IEP Predict GO terms from Neighborhoods
BP GO:0044839 cell cycle G2/M phase transition IEP Predict GO terms from Neighborhoods
CC GO:0045171 intercellular bridge IEP Predict GO terms from Neighborhoods
BP GO:0045839 negative regulation of mitotic nuclear division IEP Predict GO terms from Neighborhoods
BP GO:0045841 negative regulation of mitotic metaphase/anaphase transition IEP Predict GO terms from Neighborhoods
BP GO:0045893 positive regulation of DNA-templated transcription IEP Predict GO terms from Neighborhoods
BP GO:0045943 positive regulation of transcription by RNA polymerase I IEP Predict GO terms from Neighborhoods
BP GO:0045944 positive regulation of transcription by RNA polymerase II IEP Predict GO terms from Neighborhoods
BP GO:0046330 positive regulation of JNK cascade IEP Predict GO terms from Neighborhoods
BP GO:0046483 heterocycle metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046487 glyoxylate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046823 negative regulation of nucleocytoplasmic transport IEP Predict GO terms from Neighborhoods
BP GO:0048145 regulation of fibroblast proliferation IEP Predict GO terms from Neighborhoods
BP GO:0048146 positive regulation of fibroblast proliferation IEP Predict GO terms from Neighborhoods
BP GO:0048592 eye morphogenesis IEP Predict GO terms from Neighborhoods
MF GO:0050072 m7G(5')pppN diphosphatase activity IEP Predict GO terms from Neighborhoods
BP GO:0051090 regulation of DNA-binding transcription factor activity IEP Predict GO terms from Neighborhoods
BP GO:0051252 regulation of RNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0051567 histone H3-K9 methylation IEP Predict GO terms from Neighborhoods
BP GO:0051573 negative regulation of histone H3-K9 methylation IEP Predict GO terms from Neighborhoods
BP GO:0051769 regulation of nitric-oxide synthase biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0051770 positive regulation of nitric-oxide synthase biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0051985 negative regulation of chromosome segregation IEP Predict GO terms from Neighborhoods
BP GO:0060255 regulation of macromolecule metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0060261 positive regulation of transcription initiation by RNA polymerase II IEP Predict GO terms from Neighborhoods
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Predict GO terms from Neighborhoods
MF GO:0061629 RNA polymerase II-specific DNA-binding transcription factor binding IEP Predict GO terms from Neighborhoods
BP GO:0070453 regulation of heme biosynthetic process IEP Predict GO terms from Neighborhoods
CC GO:0070603 SWI/SNF superfamily-type complex IEP Predict GO terms from Neighborhoods
BP GO:0071044 histone mRNA catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0071173 spindle assembly checkpoint signaling IEP Predict GO terms from Neighborhoods
BP GO:0071174 mitotic spindle checkpoint signaling IEP Predict GO terms from Neighborhoods
CC GO:0071564 npBAF complex IEP Predict GO terms from Neighborhoods
CC GO:0071565 nBAF complex IEP Predict GO terms from Neighborhoods
BP GO:0071684 organism emergence from protective structure IEP Predict GO terms from Neighborhoods
BP GO:0071824 protein-DNA complex subunit organization IEP Predict GO terms from Neighborhoods
BP GO:0090239 regulation of histone H4 acetylation IEP Predict GO terms from Neighborhoods
BP GO:0090240 positive regulation of histone H4 acetylation IEP Predict GO terms from Neighborhoods
BP GO:0090304 nucleic acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0090317 negative regulation of intracellular protein transport IEP Predict GO terms from Neighborhoods
BP GO:0090596 sensory organ morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0097354 prenylation IEP Predict GO terms from Neighborhoods
CC GO:0097730 non-motile cilium IEP Predict GO terms from Neighborhoods
CC GO:0097731 9+0 non-motile cilium IEP Predict GO terms from Neighborhoods
CC GO:0097733 photoreceptor cell cilium IEP Predict GO terms from Neighborhoods
BP GO:0110154 RNA decapping IEP Predict GO terms from Neighborhoods
BP GO:0110156 methylguanosine-cap decapping IEP Predict GO terms from Neighborhoods
CC GO:0120025 plasma membrane bounded cell projection IEP Predict GO terms from Neighborhoods
BP GO:0120036 plasma membrane bounded cell projection organization IEP Predict GO terms from Neighborhoods
BP GO:0140040 mitochondrial polycistronic RNA processing IEP Predict GO terms from Neighborhoods
CC GO:0140513 nuclear protein-containing complex IEP Predict GO terms from Neighborhoods
BP GO:0140747 regulation of ncRNA transcription IEP Predict GO terms from Neighborhoods
BP GO:1900109 regulation of histone H3-K9 dimethylation IEP Predict GO terms from Neighborhoods
BP GO:1900110 negative regulation of histone H3-K9 dimethylation IEP Predict GO terms from Neighborhoods
BP GO:1900112 regulation of histone H3-K9 trimethylation IEP Predict GO terms from Neighborhoods
BP GO:1900113 negative regulation of histone H3-K9 trimethylation IEP Predict GO terms from Neighborhoods
BP GO:1900181 negative regulation of protein localization to nucleus IEP Predict GO terms from Neighborhoods
BP GO:1901044 protein polyubiquitination involved in nucleus-associated proteasomal ubiquitin-dependent protein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901360 organic cyclic compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901420 negative regulation of response to alcohol IEP Predict GO terms from Neighborhoods
BP GO:1901836 regulation of transcription of nucleolar large rRNA by RNA polymerase I IEP Predict GO terms from Neighborhoods
BP GO:1901838 positive regulation of transcription of nucleolar large rRNA by RNA polymerase I IEP Predict GO terms from Neighborhoods
BP GO:1901985 positive regulation of protein acetylation IEP Predict GO terms from Neighborhoods
BP GO:1902100 negative regulation of metaphase/anaphase transition of cell cycle IEP Predict GO terms from Neighborhoods
BP GO:1902235 regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:1902237 positive regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway IEP Predict GO terms from Neighborhoods
CC GO:1902494 catalytic complex IEP Predict GO terms from Neighborhoods
BP GO:1902659 regulation of glucose mediated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:1902661 positive regulation of glucose mediated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:1902680 positive regulation of RNA biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1903508 positive regulation of nucleic acid-templated transcription IEP Predict GO terms from Neighborhoods
BP GO:1904035 regulation of epithelial cell apoptotic process IEP Predict GO terms from Neighborhoods
BP GO:1904037 positive regulation of epithelial cell apoptotic process IEP Predict GO terms from Neighborhoods
BP GO:1904357 negative regulation of telomere maintenance via telomere lengthening IEP Predict GO terms from Neighborhoods
BP GO:1904872 regulation of telomerase RNA localization to Cajal body IEP Predict GO terms from Neighborhoods
CC GO:1904949 ATPase complex IEP Predict GO terms from Neighborhoods
CC GO:1905354 exoribonuclease complex IEP Predict GO terms from Neighborhoods
BP GO:1905819 negative regulation of chromosome separation IEP Predict GO terms from Neighborhoods
BP GO:1905898 positive regulation of response to endoplasmic reticulum stress IEP Predict GO terms from Neighborhoods
BP GO:1905958 negative regulation of cellular response to alcohol IEP Predict GO terms from Neighborhoods
BP GO:1990069 stomatal opening IEP Predict GO terms from Neighborhoods
CC GO:1990423 RZZ complex IEP Predict GO terms from Neighborhoods
BP GO:2000144 positive regulation of DNA-templated transcription initiation IEP Predict GO terms from Neighborhoods
BP GO:2000279 negative regulation of DNA biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:2000615 regulation of histone H3-K9 acetylation IEP Predict GO terms from Neighborhoods
BP GO:2000617 positive regulation of histone H3-K9 acetylation IEP Predict GO terms from Neighborhoods
BP GO:2000674 regulation of type B pancreatic cell apoptotic process IEP Predict GO terms from Neighborhoods
BP GO:2000676 positive regulation of type B pancreatic cell apoptotic process IEP Predict GO terms from Neighborhoods
BP GO:2000758 positive regulation of peptidyl-lysine acetylation IEP Predict GO terms from Neighborhoods
BP GO:2000816 negative regulation of mitotic sister chromatid separation IEP Predict GO terms from Neighborhoods
BP GO:2001235 positive regulation of apoptotic signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:2001244 positive regulation of intrinsic apoptotic signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:2001251 negative regulation of chromosome organization IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR028934 Vps26-related 9 283
No external refs found!