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  5. SOLTUB.AGRIA.G00000012555

SOLTUB.AGRIA.G00000012555


Description : Reticulon-like protein


Gene families : OG_02_0013916 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000012555
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_104


Type GO Term Name Evidence Source
MF GO:0003729 mRNA binding IEA AHRD
MF GO:0005515 protein binding IEA AHRD
CC GO:0005773 vacuole IEA AHRD
CC GO:0005788 endoplasmic reticulum lumen IEA AHRD
CC GO:0005794 Golgi apparatus IEA AHRD
CC GO:0009504 cell plate IEA AHRD
CC GO:0009510 plasmodesmatal desmotubule IEA AHRD
BP GO:0009617 response to bacterium IEA AHRD
CC GO:0071458 integral component of cytoplasmic side of endoplasmic reticulum membrane IEA AHRD
CC GO:0071782 endoplasmic reticulum tubular network IEA AHRD
BP GO:0071786 endoplasmic reticulum tubular network organization IEA AHRD
BP GO:0080167 response to karrikin IEA AHRD
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Type GO Term Name Evidence Source
BP GO:0000302 response to reactive oxygen species IEP Predict GO terms from Neighborhoods
BP GO:0002084 protein depalmitoylation IEP Predict GO terms from Neighborhoods
BP GO:0002761 regulation of myeloid leukocyte differentiation IEP Predict GO terms from Neighborhoods
BP GO:0002762 negative regulation of myeloid leukocyte differentiation IEP Predict GO terms from Neighborhoods
MF GO:0004550 nucleoside diphosphate kinase activity IEP Predict GO terms from Neighborhoods
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predict GO terms from Neighborhoods
MF GO:0004630 phospholipase D activity IEP Predict GO terms from Neighborhoods
CC GO:0005882 intermediate filament IEP Predict GO terms from Neighborhoods
CC GO:0005911 cell-cell junction IEP Predict GO terms from Neighborhoods
BP GO:0005975 carbohydrate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006076 (1->3)-beta-D-glucan catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006183 GTP biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0006228 UTP biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0006241 CTP biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0006970 response to osmotic stress IEP Predict GO terms from Neighborhoods
BP GO:0006979 response to oxidative stress IEP Predict GO terms from Neighborhoods
BP GO:0007549 dosage compensation IEP Predict GO terms from Neighborhoods
BP GO:0007589 body fluid secretion IEP Predict GO terms from Neighborhoods
BP GO:0007595 lactation IEP Predict GO terms from Neighborhoods
MF GO:0008474 palmitoyl-(protein) hydrolase activity IEP Predict GO terms from Neighborhoods
BP GO:0009048 dosage compensation by inactivation of X chromosome IEP Predict GO terms from Neighborhoods
BP GO:0009147 pyrimidine nucleoside triphosphate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009148 pyrimidine nucleoside triphosphate biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009208 pyrimidine ribonucleoside triphosphate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009209 pyrimidine ribonucleoside triphosphate biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009218 pyrimidine ribonucleotide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009220 pyrimidine ribonucleotide biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009311 oligosaccharide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009408 response to heat IEP Predict GO terms from Neighborhoods
CC GO:0009506 plasmodesma IEP Predict GO terms from Neighborhoods
CC GO:0009543 chloroplast thylakoid lumen IEP Predict GO terms from Neighborhoods
BP GO:0009615 response to virus IEP Predict GO terms from Neighborhoods
BP GO:0009651 response to salt stress IEP Predict GO terms from Neighborhoods
BP GO:0009787 regulation of abscisic acid-activated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0009789 positive regulation of abscisic acid-activated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0009859 pollen hydration IEP Predict GO terms from Neighborhoods
BP GO:0009962 regulation of flavonoid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0010410 hemicellulose metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0010555 response to mannitol IEP Predict GO terms from Neighborhoods
BP GO:0014070 response to organic cyclic compound IEP Predict GO terms from Neighborhoods
BP GO:0014075 response to amine IEP Predict GO terms from Neighborhoods
CC GO:0016020 membrane IEP Predict GO terms from Neighborhoods
BP GO:0016032 viral process IEP Predict GO terms from Neighborhoods
MF GO:0016157 sucrose synthase activity IEP Predict GO terms from Neighborhoods
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predict GO terms from Neighborhoods
MF GO:0016776 phosphotransferase activity, phosphate group as acceptor IEP Predict GO terms from Neighborhoods
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predict GO terms from Neighborhoods
MF GO:0019205 nucleobase-containing compound kinase activity IEP Predict GO terms from Neighborhoods
MF GO:0019215 intermediate filament binding IEP Predict GO terms from Neighborhoods
BP GO:0021766 hippocampus development IEP Predict GO terms from Neighborhoods
CC GO:0030054 cell junction IEP Predict GO terms from Neighborhoods
BP GO:0030163 protein catabolic process IEP Predict GO terms from Neighborhoods
MF GO:0030247 polysaccharide binding IEP Predict GO terms from Neighborhoods
CC GO:0030425 dendrite IEP Predict GO terms from Neighborhoods
CC GO:0031225 anchored component of membrane IEP Predict GO terms from Neighborhoods
CC GO:0031226 intrinsic component of plasma membrane IEP Predict GO terms from Neighborhoods
CC GO:0031256 leading edge membrane IEP Predict GO terms from Neighborhoods
CC GO:0031302 intrinsic component of endosome membrane IEP Predict GO terms from Neighborhoods
BP GO:0031341 regulation of cell killing IEP Predict GO terms from Neighborhoods
BP GO:0031344 regulation of cell projection organization IEP Predict GO terms from Neighborhoods
MF GO:0031593 polyubiquitin modification-dependent protein binding IEP Predict GO terms from Neighborhoods
MF GO:0031624 ubiquitin conjugating enzyme binding IEP Predict GO terms from Neighborhoods
CC GO:0031978 plastid thylakoid lumen IEP Predict GO terms from Neighborhoods
BP GO:0032055 negative regulation of translation in response to stress IEP Predict GO terms from Neighborhoods
CC GO:0032578 aleurone grain membrane IEP Predict GO terms from Neighborhoods
CC GO:0032587 ruffle membrane IEP Predict GO terms from Neighborhoods
BP GO:0033574 response to testosterone IEP Predict GO terms from Neighborhoods
CC GO:0034098 VCP-NPL4-UFD1 AAA ATPase complex IEP Predict GO terms from Neighborhoods
BP GO:0034638 phosphatidylcholine catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0034720 histone H3-K4 demethylation IEP Predict GO terms from Neighborhoods
MF GO:0036435 K48-linked polyubiquitin modification-dependent protein binding IEP Predict GO terms from Neighborhoods
BP GO:0042157 lipoprotein metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0042159 lipoprotein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0042542 response to hydrogen peroxide IEP Predict GO terms from Neighborhoods
BP GO:0042595 behavioral response to starvation IEP Predict GO terms from Neighborhoods
MF GO:0043015 gamma-tubulin binding IEP Predict GO terms from Neighborhoods
MF GO:0043024 ribosomal small subunit binding IEP Predict GO terms from Neighborhoods
BP GO:0043388 positive regulation of DNA binding IEP Predict GO terms from Neighborhoods
BP GO:0043555 regulation of translation in response to stress IEP Predict GO terms from Neighborhoods
CC GO:0043668 exine IEP Predict GO terms from Neighborhoods
CC GO:0043678 intine IEP Predict GO terms from Neighborhoods
BP GO:0044000 movement in host IEP Predict GO terms from Neighborhoods
BP GO:0044001 migration in host IEP Predict GO terms from Neighborhoods
BP GO:0044262 cellular carbohydrate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0044264 cellular polysaccharide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0044314 protein K27-linked ubiquitination IEP Predict GO terms from Neighborhoods
BP GO:0045638 negative regulation of myeloid cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0046036 CTP metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046039 GTP metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046051 UTP metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046466 membrane lipid catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046475 glycerophospholipid catabolic process IEP Predict GO terms from Neighborhoods
CC GO:0046658 anchored component of plasma membrane IEP Predict GO terms from Neighborhoods
BP GO:0046739 transport of virus in multicellular host IEP Predict GO terms from Neighborhoods
BP GO:0046741 transport of virus in host, tissue to tissue IEP Predict GO terms from Neighborhoods
BP GO:0046794 transport of virus IEP Predict GO terms from Neighborhoods
MF GO:0046982 protein heterodimerization activity IEP Predict GO terms from Neighborhoods
BP GO:0048759 xylem vessel member cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0050679 positive regulation of epithelial cell proliferation IEP Predict GO terms from Neighborhoods
BP GO:0050832 defense response to fungus IEP Predict GO terms from Neighborhoods
MF GO:0051082 unfolded protein binding IEP Predict GO terms from Neighborhoods
BP GO:0051665 membrane raft localization IEP Predict GO terms from Neighborhoods
BP GO:0051701 biological process involved in interaction with host IEP Predict GO terms from Neighborhoods
BP GO:0051709 regulation of killing of cells of another organism IEP Predict GO terms from Neighborhoods
BP GO:0051839 regulation by host of cytolysis of symbiont cells IEP Predict GO terms from Neighborhoods
BP GO:0051841 positive regulation by host of cytolysis of symbiont cells IEP Predict GO terms from Neighborhoods
BP GO:0060765 regulation of androgen receptor signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0060816 random inactivation of X chromosome IEP Predict GO terms from Neighborhoods
CC GO:0070161 anchoring junction IEP Predict GO terms from Neighborhoods
MF GO:0070290 N-acylphosphatidylethanolamine-specific phospholipase D activity IEP Predict GO terms from Neighborhoods
CC GO:0070505 pollen coat IEP Predict GO terms from Neighborhoods
CC GO:0070645 Ubisch body IEP Predict GO terms from Neighborhoods
BP GO:0071398 cellular response to fatty acid IEP Predict GO terms from Neighborhoods
CC GO:0071683 sensory dendrite IEP Predict GO terms from Neighborhoods
MF GO:0071796 K6-linked polyubiquitin modification-dependent protein binding IEP Predict GO terms from Neighborhoods
BP GO:0080149 sucrose induced translational repression IEP Predict GO terms from Neighborhoods
BP GO:0080165 callose deposition in phloem sieve plate IEP Predict GO terms from Neighborhoods
BP GO:0085020 protein K6-linked ubiquitination IEP Predict GO terms from Neighborhoods
BP GO:0090059 protoxylem development IEP Predict GO terms from Neighborhoods
BP GO:0090085 regulation of protein deubiquitination IEP Predict GO terms from Neighborhoods
BP GO:0090086 negative regulation of protein deubiquitination IEP Predict GO terms from Neighborhoods
BP GO:0090601 enucleation IEP Predict GO terms from Neighborhoods
BP GO:0090602 sieve element enucleation IEP Predict GO terms from Neighborhoods
BP GO:0098542 defense response to other organism IEP Predict GO terms from Neighborhoods
MF GO:0098599 palmitoyl hydrolase activity IEP Predict GO terms from Neighborhoods
BP GO:0098734 macromolecule depalmitoylation IEP Predict GO terms from Neighborhoods
CC GO:0098936 intrinsic component of postsynaptic membrane IEP Predict GO terms from Neighborhoods
CC GO:0098948 intrinsic component of postsynaptic specialization membrane IEP Predict GO terms from Neighborhoods
CC GO:0098949 intrinsic component of postsynaptic endosome membrane IEP Predict GO terms from Neighborhoods
CC GO:0098951 intrinsic component of postsynaptic recycling endosome membrane IEP Predict GO terms from Neighborhoods
CC GO:0099025 anchored component of postsynaptic membrane IEP Predict GO terms from Neighborhoods
CC GO:0099030 anchored component of postsynaptic specialization membrane IEP Predict GO terms from Neighborhoods
CC GO:0099031 anchored component of postsynaptic density membrane IEP Predict GO terms from Neighborhoods
CC GO:0099033 anchored component of postsynaptic recycling endosome membrane IEP Predict GO terms from Neighborhoods
CC GO:0099034 anchored component of postsynaptic endosome membrane IEP Predict GO terms from Neighborhoods
CC GO:0099144 anchored component of synaptic membrane IEP Predict GO terms from Neighborhoods
CC GO:0099146 intrinsic component of postsynaptic density membrane IEP Predict GO terms from Neighborhoods
CC GO:0099240 intrinsic component of synaptic membrane IEP Predict GO terms from Neighborhoods
BP GO:0120035 regulation of plasma membrane bounded cell projection organization IEP Predict GO terms from Neighborhoods
BP GO:1900055 regulation of leaf senescence IEP Predict GO terms from Neighborhoods
BP GO:1900057 positive regulation of leaf senescence IEP Predict GO terms from Neighborhoods
BP GO:1900095 regulation of dosage compensation by inactivation of X chromosome IEP Predict GO terms from Neighborhoods
BP GO:1901348 positive regulation of secondary cell wall biogenesis IEP Predict GO terms from Neighborhoods
BP GO:1901419 regulation of response to alcohol IEP Predict GO terms from Neighborhoods
BP GO:1901565 organonitrogen compound catabolic process IEP Predict GO terms from Neighborhoods
BP GO:1902106 negative regulation of leukocyte differentiation IEP Predict GO terms from Neighborhoods
BP GO:1902473 regulation of protein localization to synapse IEP Predict GO terms from Neighborhoods
BP GO:1902816 regulation of protein localization to microtubule IEP Predict GO terms from Neighborhoods
BP GO:1902817 negative regulation of protein localization to microtubule IEP Predict GO terms from Neighborhoods
BP GO:1902950 regulation of dendritic spine maintenance IEP Predict GO terms from Neighborhoods
BP GO:1903093 regulation of protein K48-linked deubiquitination IEP Predict GO terms from Neighborhoods
BP GO:1903094 negative regulation of protein K48-linked deubiquitination IEP Predict GO terms from Neighborhoods
BP GO:1903340 positive regulation of cell wall organization or biogenesis IEP Predict GO terms from Neighborhoods
BP GO:1903573 negative regulation of response to endoplasmic reticulum stress IEP Predict GO terms from Neighborhoods
BP GO:1903707 negative regulation of hemopoiesis IEP Predict GO terms from Neighborhoods
BP GO:1904292 regulation of ERAD pathway IEP Predict GO terms from Neighborhoods
BP GO:1904293 negative regulation of ERAD pathway IEP Predict GO terms from Neighborhoods
BP GO:1904550 response to arachidonic acid IEP Predict GO terms from Neighborhoods
MF GO:1904855 proteasome regulatory particle binding IEP Predict GO terms from Neighborhoods
BP GO:1905666 regulation of protein localization to endosome IEP Predict GO terms from Neighborhoods
BP GO:1905668 positive regulation of protein localization to endosome IEP Predict GO terms from Neighborhoods
BP GO:1905957 regulation of cellular response to alcohol IEP Predict GO terms from Neighborhoods
BP GO:2000152 regulation of ubiquitin-specific protease activity IEP Predict GO terms from Neighborhoods
BP GO:2000157 negative regulation of ubiquitin-specific protease activity IEP Predict GO terms from Neighborhoods
BP GO:2000693 positive regulation of seed maturation IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR003388 Reticulon 34 174
No external refs found!