Description : Replication protein a 70 kDa dna-binding subunit b
Gene families : OG_02_0000028 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000012575 | |
| Cluster | HCCA Clusters (HRR 50 & PCC 0.5): Cluster_251 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| SOLTUB.AGRIA.G00000039507 | No alias | Replication protein a 70 kDa dna-binding subunit b | 0.02 | Orthogroups with 8 Potato genotypes | |
| SOLTUB.AGRIA.G00000039507 | No alias | Replication protein a 70 kDa dna-binding subunit b | 0.02 | Orthogroups with 8 Potato genotypes | |
| SOLTUB.AGRIA.G00000039507 | No alias | Replication protein a 70 kDa dna-binding subunit b | 0.02 | Orthogroups with 8 Potato genotypes |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000315 | organellar large ribosomal subunit | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0003676 | nucleic acid binding | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005654 | nucleoplasm | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005681 | spliceosomal complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005684 | U2-type spliceosomal complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005762 | mitochondrial large ribosomal subunit | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006397 | mRNA processing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006482 | protein demethylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006909 | phagocytosis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0007249 | I-kappaB kinase/NF-kappaB signaling | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0008214 | protein dealkylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0008380 | RNA splicing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010048 | vernalization response | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0016071 | mRNA metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0018126 | protein hydroxylation | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0019208 | phosphatase regulator activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0019888 | protein phosphatase regulator activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0032451 | demethylase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0035196 | miRNA processing | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0070180 | large ribosomal subunit rRNA binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0070988 | demethylation | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0071005 | U2-type precatalytic spliceosome | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0071011 | precatalytic spliceosome | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0080060 | integument development | IEP | Predict GO terms from Neighborhoods |
| CC | GO:1990904 | ribonucleoprotein complex | IEP | Predict GO terms from Neighborhoods |
No InterPro domains available for this sequence
| No external refs found! |