Coexpression cluster: Cluster_251 (HCCA Clusters (HRR 50 & PCC 0.5))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0140513 nuclear protein-containing complex 25.42% (15/59) 2.74 0.0 6e-06
GO:0032991 protein-containing complex 40.68% (24/59) 1.72 0.0 2.3e-05
GO:0060255 regulation of macromolecule metabolic process 45.76% (27/59) 1.53 0.0 2.4e-05
GO:0016070 RNA metabolic process 28.81% (17/59) 2.27 0.0 3e-05
GO:0051171 regulation of nitrogen compound metabolic process 42.37% (25/59) 1.54 0.0 7.1e-05
GO:0032806 carboxy-terminal domain protein kinase complex 6.78% (4/59) 5.98 1e-06 0.000139
GO:0080090 regulation of primary metabolic process 42.37% (25/59) 1.45 1e-06 0.000178
GO:0005654 nucleoplasm 22.03% (13/59) 2.27 2e-06 0.000424
GO:0090304 nucleic acid metabolic process 28.81% (17/59) 1.8 3e-06 0.000579
GO:0019222 regulation of metabolic process 45.76% (27/59) 1.25 3e-06 0.000603
GO:0010468 regulation of gene expression 35.59% (21/59) 1.47 7e-06 0.001013
GO:0046831 regulation of RNA export from nucleus 5.08% (3/59) 6.26 8e-06 0.001062
GO:0005681 spliceosomal complex 10.17% (6/59) 3.67 8e-06 0.0011
GO:0032239 regulation of nucleobase-containing compound transport 5.08% (3/59) 6.2 9e-06 0.001108
GO:0000398 mRNA splicing, via spliceosome 8.47% (5/59) 4.1 1.1e-05 0.001248
GO:0006139 nucleobase-containing compound metabolic process 30.51% (18/59) 1.6 1.3e-05 0.001314
GO:0006397 mRNA processing 11.86% (7/59) 3.12 1.5e-05 0.001508
GO:0031323 regulation of cellular metabolic process 38.98% (23/59) 1.26 2.5e-05 0.001748
GO:0010556 regulation of macromolecule biosynthetic process 30.51% (18/59) 1.52 2.7e-05 0.001768
GO:0070827 obsolete chromatin maintenance 3.39% (2/59) 8.05 2.2e-05 0.001772
GO:0031441 negative regulation of mRNA 3'-end processing 3.39% (2/59) 8.05 2.2e-05 0.001772
GO:1900364 negative regulation of mRNA polyadenylation 3.39% (2/59) 8.05 2.2e-05 0.001772
GO:0032784 regulation of DNA-templated transcription elongation 6.78% (4/59) 4.58 2.5e-05 0.0018
GO:0008380 RNA splicing 10.17% (6/59) 3.44 1.9e-05 0.001803
GO:0004693 cyclin-dependent protein serine/threonine kinase activity 5.08% (3/59) 5.56 3.6e-05 0.001815
GO:0097472 cyclin-dependent protein kinase activity 5.08% (3/59) 5.56 3.6e-05 0.001815
GO:0050684 regulation of mRNA processing 8.47% (5/59) 3.82 2.8e-05 0.001816
GO:0051252 regulation of RNA metabolic process 28.81% (17/59) 1.54 3.9e-05 0.00184
GO:0019908 nuclear cyclin-dependent protein kinase holoenzyme complex 5.08% (3/59) 5.75 2.4e-05 0.001853
GO:0008353 RNA polymerase II CTD heptapeptide repeat kinase activity 5.08% (3/59) 5.53 3.9e-05 0.001892
GO:1903311 regulation of mRNA metabolic process 10.17% (6/59) 3.28 3.6e-05 0.001918
GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile 8.47% (5/59) 3.79 3.1e-05 0.001934
GO:0000375 RNA splicing, via transesterification reactions 8.47% (5/59) 3.76 3.5e-05 0.001959
GO:0065003 protein-containing complex assembly 16.95% (10/59) 2.28 3.4e-05 0.002004
GO:0005829 cytosol 35.59% (21/59) 1.32 3.5e-05 0.002026
GO:0045842 positive regulation of mitotic metaphase/anaphase transition 5.08% (3/59) 5.43 4.7e-05 0.002132
GO:1901970 positive regulation of mitotic sister chromatid separation 5.08% (3/59) 5.43 4.7e-05 0.002132
GO:0046822 regulation of nucleocytoplasmic transport 6.78% (4/59) 4.33 4.9e-05 0.002147
GO:1902554 serine/threonine protein kinase complex 6.78% (4/59) 4.28 5.5e-05 0.00235
GO:0007088 regulation of mitotic nuclear division 6.78% (4/59) 4.23 6.3e-05 0.002636
GO:0033043 regulation of organelle organization 13.56% (8/59) 2.51 7.5e-05 0.003047
GO:0048522 positive regulation of cellular process 33.9% (20/59) 1.29 7.7e-05 0.003055
GO:0051246 regulation of protein metabolic process 20.34% (12/59) 1.88 8e-05 0.003107
GO:0140098 catalytic activity, acting on RNA 11.86% (7/59) 2.73 8.7e-05 0.003158
GO:0003723 RNA binding 22.03% (13/59) 1.76 8.6e-05 0.003177
GO:0061695 transferase complex, transferring phosphorus-containing groups 8.47% (5/59) 3.46 9.2e-05 0.003188
GO:1902911 protein kinase complex 6.78% (4/59) 4.1 9.1e-05 0.003238
GO:0045840 positive regulation of mitotic nuclear division 5.08% (3/59) 5.15 8.6e-05 0.003239
GO:0016071 mRNA metabolic process 13.56% (8/59) 2.44 0.000108 0.00359
GO:0019219 regulation of nucleobase-containing compound metabolic process 28.81% (17/59) 1.42 0.000111 0.003618
GO:1902494 catalytic complex 18.64% (11/59) 1.94 0.000113 0.003624
GO:0043933 protein-containing complex organization 16.95% (10/59) 2.08 0.000107 0.003648
GO:1902101 positive regulation of metaphase/anaphase transition of cell cycle 5.08% (3/59) 4.98 0.000122 0.003752
GO:1905820 positive regulation of chromosome separation 5.08% (3/59) 4.98 0.000122 0.003752
GO:0140640 catalytic activity, acting on a nucleic acid 13.56% (8/59) 2.39 0.000137 0.004154
GO:0006396 RNA processing 16.95% (10/59) 1.97 0.000202 0.005087
GO:0040021 hermaphrodite germ-line sex determination 3.39% (2/59) 6.56 0.000201 0.005163
GO:0040022 feminization of hermaphroditic germ-line 3.39% (2/59) 6.56 0.000201 0.005163
GO:0006355 regulation of DNA-templated transcription 25.42% (15/59) 1.5 0.000174 0.00517
GO:2001141 regulation of RNA biosynthetic process 25.42% (15/59) 1.49 0.00018 0.005183
GO:0048518 positive regulation of biological process 37.29% (22/59) 1.11 0.000197 0.005201
GO:0050657 nucleic acid transport 6.78% (4/59) 3.82 0.000188 0.005219
GO:0050658 RNA transport 6.78% (4/59) 3.82 0.000188 0.005219
GO:0051236 establishment of RNA localization 6.78% (4/59) 3.82 0.000192 0.005239
GO:1903506 regulation of nucleic acid-templated transcription 25.42% (15/59) 1.49 0.000179 0.005241
GO:0008134 transcription factor binding 10.17% (6/59) 2.83 0.000196 0.005254
GO:0001099 basal RNA polymerase II transcription machinery binding 5.08% (3/59) 4.69 0.000221 0.005488
GO:0051726 regulation of cell cycle 13.56% (8/59) 2.27 0.000238 0.005594
GO:0001098 basal transcription machinery binding 5.08% (3/59) 4.65 0.000238 0.005666
GO:0070063 RNA polymerase binding 5.08% (3/59) 4.65 0.000238 0.005666
GO:0010793 regulation of mRNA export from nucleus 3.39% (2/59) 6.46 0.000232 0.005689
GO:0006357 regulation of transcription by RNA polymerase II 15.25% (9/59) 2.08 0.000248 0.005741
GO:0051783 regulation of nuclear division 6.78% (4/59) 3.71 0.000252 0.005757
GO:0051785 positive regulation of nuclear division 5.08% (3/59) 4.62 0.000256 0.00577
GO:0060303 obsolete regulation of nucleosome density 3.39% (2/59) 6.37 0.000265 0.00589
GO:0009889 regulation of biosynthetic process 30.51% (18/59) 1.25 0.000284 0.006235
GO:0002944 cyclin K-CDK12 complex 3.39% (2/59) 6.28 0.0003 0.006252
GO:0002945 cyclin K-CDK13 complex 3.39% (2/59) 6.28 0.0003 0.006252
GO:0000439 transcription factor TFIIH core complex 3.39% (2/59) 6.28 0.0003 0.006252
GO:0010604 positive regulation of macromolecule metabolic process 23.73% (14/59) 1.5 0.000291 0.006304
GO:0030071 regulation of mitotic metaphase/anaphase transition 5.08% (3/59) 4.48 0.000338 0.006872
GO:0090239 regulation of histone H4 acetylation 3.39% (2/59) 6.2 0.000337 0.00694
GO:0034243 regulation of transcription elongation by RNA polymerase II 5.08% (3/59) 4.46 0.00035 0.007016
GO:0009893 positive regulation of metabolic process 25.42% (15/59) 1.4 0.000367 0.007288
GO:0050794 regulation of cellular process 50.85% (30/59) 0.8 0.000379 0.00743
GO:0010965 regulation of mitotic sister chromatid separation 5.08% (3/59) 4.39 0.00041 0.007844
GO:0046483 heterocycle metabolic process 30.51% (18/59) 1.21 0.000407 0.007875
GO:1900363 regulation of mRNA polyadenylation 3.39% (2/59) 6.05 0.000418 0.007917
GO:2000197 regulation of ribonucleoprotein complex localization 3.39% (2/59) 5.98 0.000462 0.008454
GO:0045943 positive regulation of transcription by RNA polymerase I 3.39% (2/59) 5.98 0.000462 0.008454
GO:0010628 positive regulation of gene expression 11.86% (7/59) 2.33 0.00046 0.008615
GO:0006913 nucleocytoplasmic transport 6.78% (4/59) 3.46 0.000492 0.008903
GO:0018992 germ-line sex determination 3.39% (2/59) 5.91 0.000507 0.008993
GO:0051169 nuclear transport 6.78% (4/59) 3.45 0.000507 0.009085
GO:0000307 cyclin-dependent protein kinase holoenzyme complex 5.08% (3/59) 4.24 0.000549 0.009525
GO:1903312 negative regulation of mRNA metabolic process 5.08% (3/59) 4.24 0.000549 0.009525
GO:0051649 establishment of localization in cell 15.25% (9/59) 1.91 0.000582 0.009991
GO:1902099 regulation of metaphase/anaphase transition of cell cycle 5.08% (3/59) 4.19 0.000612 0.009997
GO:0060341 regulation of cellular localization 10.17% (6/59) 2.52 0.000607 0.01002
GO:0034641 cellular nitrogen compound metabolic process 30.51% (18/59) 1.16 0.000623 0.010073
GO:0035578 azurophil granule lumen 3.39% (2/59) 5.79 0.000605 0.010081
GO:0051641 cellular localization 18.64% (11/59) 1.66 0.000601 0.010119
GO:0031326 regulation of cellular biosynthetic process 28.81% (17/59) 1.22 0.000596 0.01013
GO:0008024 cyclin/CDK positive transcription elongation factor complex 3.39% (2/59) 5.73 0.000657 0.010526
GO:0005575 cellular_component 81.36% (48/59) 0.41 0.000667 0.010578
GO:0033045 regulation of sister chromatid segregation 5.08% (3/59) 4.12 0.000697 0.010857
GO:0050790 regulation of catalytic activity 13.56% (8/59) 2.04 0.000696 0.010939
GO:1905818 regulation of chromosome separation 5.08% (3/59) 4.09 0.000752 0.011493
GO:0006725 cellular aromatic compound metabolic process 32.2% (19/59) 1.09 0.000751 0.01159
GO:0032386 regulation of intracellular transport 6.78% (4/59) 3.28 0.000773 0.011598
GO:0034515 proteasome storage granule 3.39% (2/59) 5.62 0.000767 0.011621
GO:0008540 proteasome regulatory particle, base subcomplex 3.39% (2/59) 5.56 0.000826 0.01228
GO:0051130 positive regulation of cellular component organization 10.17% (6/59) 2.43 0.000843 0.012429
GO:0050789 regulation of biological process 54.24% (32/59) 0.69 0.000854 0.012483
GO:2001253 regulation of histone H3-K36 trimethylation 3.39% (2/59) 5.51 0.000886 0.012833
GO:0046907 intracellular transport 13.56% (8/59) 1.97 0.000942 0.013536
GO:0033044 regulation of chromosome organization 6.78% (4/59) 3.15 0.001084 0.014919
GO:2000737 negative regulation of stem cell differentiation 3.39% (2/59) 5.37 0.001079 0.01498
GO:0016973 poly(A)+ mRNA export from nucleus 3.39% (2/59) 5.37 0.001079 0.01498
GO:0031440 regulation of mRNA 3'-end processing 3.39% (2/59) 5.37 0.001079 0.01498
GO:0050686 negative regulation of mRNA processing 3.39% (2/59) 5.37 0.001079 0.01498
GO:1901992 positive regulation of mitotic cell cycle phase transition 5.08% (3/59) 3.89 0.001113 0.015198
GO:0098772 molecular function regulator activity 11.86% (7/59) 2.11 0.001146 0.015524
GO:0051983 regulation of chromosome segregation 5.08% (3/59) 3.87 0.001161 0.015604
GO:0070816 phosphorylation of RNA polymerase II C-terminal domain 3.39% (2/59) 5.28 0.001218 0.016106
GO:0006367 transcription initiation at RNA polymerase II promoter 3.39% (2/59) 5.28 0.001218 0.016106
GO:0008298 intracellular mRNA localization 3.39% (2/59) 5.24 0.001291 0.016798
GO:0000414 regulation of histone H3-K36 methylation 3.39% (2/59) 5.24 0.001291 0.016798
GO:0071013 catalytic step 2 spliceosome 5.08% (3/59) 3.79 0.001369 0.01754
GO:0071230 cellular response to amino acid stimulus 3.39% (2/59) 5.2 0.001365 0.017632
GO:0015931 nucleobase-containing compound transport 6.78% (4/59) 3.05 0.001408 0.017903
GO:1990904 ribonucleoprotein complex 11.86% (7/59) 2.06 0.001421 0.017934
GO:0090284 obsolete positive regulation of protein glycosylation in Golgi 1.69% (1/59) 9.37 0.001509 0.017962
GO:0048867 stem cell fate determination 1.69% (1/59) 9.37 0.001509 0.017962
GO:0001096 TFIIF-class transcription factor complex binding 1.69% (1/59) 9.37 0.001509 0.017962
GO:0005674 transcription factor TFIIF complex 1.69% (1/59) 9.37 0.001509 0.017962
GO:0061632 RNA lariat debranching enzyme activator activity 1.69% (1/59) 9.37 0.001509 0.017962
GO:0006356 regulation of transcription by RNA polymerase I 3.39% (2/59) 5.16 0.001442 0.018061
GO:0090575 RNA polymerase II transcription regulator complex 5.08% (3/59) 3.73 0.001538 0.018177
GO:0051028 mRNA transport 5.08% (3/59) 3.74 0.001509 0.018625
GO:0051168 nuclear export 5.08% (3/59) 3.74 0.001509 0.018625
GO:0005515 protein binding 57.63% (34/59) 0.61 0.001612 0.018914
GO:0005684 U2-type spliceosomal complex 5.08% (3/59) 3.68 0.001689 0.019412
GO:0007530 sex determination 3.39% (2/59) 5.05 0.001684 0.01948
GO:0043248 proteasome assembly 3.39% (2/59) 5.05 0.001684 0.01948
GO:0008022 protein C-terminus binding 5.08% (3/59) 3.67 0.001721 0.019636
GO:0032481 positive regulation of type I interferon production 3.39% (2/59) 5.01 0.001768 0.020042
GO:0007030 Golgi organization 5.08% (3/59) 3.65 0.001784 0.020087
GO:0019901 protein kinase binding 8.47% (5/59) 2.51 0.001844 0.020615
GO:1901989 positive regulation of cell cycle phase transition 5.08% (3/59) 3.63 0.001883 0.02091
GO:0031152 aggregation involved in sorocarp development 3.39% (2/59) 4.95 0.001944 0.021444
GO:0045931 positive regulation of mitotic cell cycle 5.08% (3/59) 3.56 0.002161 0.023685
GO:0030234 enzyme regulator activity 10.17% (6/59) 2.16 0.002201 0.023962
GO:1901360 organic cyclic compound metabolic process 32.2% (19/59) 0.96 0.002256 0.024402
GO:0000993 RNA polymerase II complex binding 3.39% (2/59) 4.82 0.002318 0.024912
GO:0071014 post-mRNA release spliceosomal complex 3.39% (2/59) 4.79 0.002416 0.025477
GO:0048193 Golgi vesicle transport 6.78% (4/59) 2.84 0.002386 0.025478
GO:0032774 RNA biosynthetic process 6.78% (4/59) 2.84 0.002409 0.025564
GO:0010638 positive regulation of organelle organization 6.78% (4/59) 2.8 0.002626 0.027343
GO:0045787 positive regulation of cell cycle 6.78% (4/59) 2.8 0.002651 0.027431
GO:0043175 RNA polymerase core enzyme binding 3.39% (2/59) 4.73 0.002619 0.02744
GO:0006403 RNA localization 3.39% (2/59) 4.7 0.002723 0.028004
GO:0032479 regulation of type I interferon production 3.39% (2/59) 4.62 0.003047 0.029178
GO:0030120 vesicle coat 3.39% (2/59) 4.62 0.003047 0.029178
GO:0070679 inositol 1,4,5 trisphosphate binding 1.69% (1/59) 8.37 0.003017 0.029219
GO:0005796 Golgi lumen 1.69% (1/59) 8.37 0.003017 0.029219
GO:0021768 nucleus accumbens development 1.69% (1/59) 8.37 0.003017 0.029219
GO:0060166 olfactory pit development 1.69% (1/59) 8.37 0.003017 0.029219
GO:0070384 Harderian gland development 1.69% (1/59) 8.37 0.003017 0.029219
GO:0004825 methionine-tRNA ligase activity 1.69% (1/59) 8.37 0.003017 0.029219
GO:0007249 I-kappaB kinase/NF-kappaB signaling 1.69% (1/59) 8.37 0.003017 0.029219
GO:0006399 tRNA metabolic process 6.78% (4/59) 2.74 0.0031 0.029508
GO:0031325 positive regulation of cellular metabolic process 20.34% (12/59) 1.3 0.002898 0.029615
GO:0043170 macromolecule metabolic process 38.98% (23/59) 0.8 0.002952 0.029986
GO:0110165 cellular anatomical entity 77.97% (46/59) 0.37 0.002995 0.030239
GO:0065009 regulation of molecular function 15.25% (9/59) 1.56 0.003203 0.03032
GO:0008023 transcription elongation factor complex 3.39% (2/59) 4.54 0.003389 0.031898
GO:0008104 protein localization 13.56% (8/59) 1.67 0.003459 0.032375
GO:0006891 intra-Golgi vesicle-mediated transport 3.39% (2/59) 4.51 0.003507 0.032637
GO:0030425 dendrite 5.08% (3/59) 3.28 0.003673 0.033996
GO:0022607 cellular component assembly 16.95% (10/59) 1.42 0.003719 0.034236
GO:0005776 autophagosome 3.39% (2/59) 4.42 0.003996 0.036579
GO:0002072 optic cup morphogenesis involved in camera-type eye development 1.69% (1/59) 7.79 0.004522 0.03903
GO:0048857 neural nucleus development 1.69% (1/59) 7.79 0.004522 0.03903
GO:0032051 clathrin light chain binding 1.69% (1/59) 7.79 0.004522 0.03903
GO:0035159 regulation of tube length, open tracheal system 1.69% (1/59) 7.79 0.004522 0.03903
GO:1990763 arrestin family protein binding 1.69% (1/59) 7.79 0.004522 0.03903
GO:0004631 phosphomevalonate kinase activity 1.69% (1/59) 7.79 0.004522 0.03903
GO:0006431 methionyl-tRNA aminoacylation 1.69% (1/59) 7.79 0.004522 0.03903
GO:0043630 ncRNA polyadenylation involved in polyadenylation-dependent ncRNA catabolic process 1.69% (1/59) 7.79 0.004522 0.03903
GO:0019899 enzyme binding 15.25% (9/59) 1.48 0.004618 0.039658
GO:0005488 binding 67.8% (40/59) 0.44 0.004421 0.040249
GO:0032559 adenyl ribonucleotide binding 15.25% (9/59) 1.47 0.004789 0.040292
GO:0065007 biological regulation 54.24% (32/59) 0.56 0.004464 0.040416
GO:0004812 aminoacyl-tRNA ligase activity 3.39% (2/59) 4.28 0.004786 0.040474
GO:0006418 tRNA aminoacylation for protein translation 3.39% (2/59) 4.28 0.004786 0.040474
GO:0016875 ligase activity, forming carbon-oxygen bonds 3.39% (2/59) 4.28 0.004786 0.040474
GO:0010557 positive regulation of macromolecule biosynthetic process 15.25% (9/59) 1.46 0.00489 0.040535
GO:0030554 adenyl nucleotide binding 15.25% (9/59) 1.46 0.004949 0.040619
GO:0046824 positive regulation of nucleocytoplasmic transport 3.39% (2/59) 4.33 0.004515 0.040662
GO:0043228 non-membrane-bounded organelle 20.34% (12/59) 1.2 0.004884 0.040685
GO:0043232 intracellular non-membrane-bounded organelle 20.34% (12/59) 1.2 0.004884 0.040685
GO:0045727 positive regulation of translation 5.08% (3/59) 3.13 0.004946 0.040792
GO:2000736 regulation of stem cell differentiation 3.39% (2/59) 4.24 0.005064 0.041356
GO:0010564 regulation of cell cycle process 8.47% (5/59) 2.15 0.005351 0.042449
GO:0003725 double-stranded RNA binding 3.39% (2/59) 4.2 0.005349 0.042641
GO:0043038 amino acid activation 3.39% (2/59) 4.2 0.005349 0.042641
GO:0043039 tRNA aminoacylation 3.39% (2/59) 4.2 0.005349 0.042641
GO:0051173 positive regulation of nitrogen compound metabolic process 18.64% (11/59) 1.26 0.005323 0.043045
GO:0034660 ncRNA metabolic process 10.17% (6/59) 1.9 0.005298 0.043053
GO:0034237 protein kinase A regulatory subunit binding 1.69% (1/59) 7.37 0.006024 0.044019
GO:0030506 ankyrin binding 1.69% (1/59) 7.37 0.006024 0.044019
GO:0071439 clathrin complex 1.69% (1/59) 7.37 0.006024 0.044019
GO:0017102 methionyl glutamyl tRNA synthetase complex 1.69% (1/59) 7.37 0.006024 0.044019
GO:0055122 response to very low light intensity stimulus 1.69% (1/59) 7.37 0.006024 0.044019
GO:0060715 syncytiotrophoblast cell differentiation involved in labyrinthine layer development 1.69% (1/59) 7.37 0.006024 0.044019
GO:0016077 sno(s)RNA catabolic process 1.69% (1/59) 7.37 0.006024 0.044019
GO:0071076 RNA 3' uridylation 1.69% (1/59) 7.37 0.006024 0.044019
GO:0044828 negative regulation by host of viral genome replication 1.69% (1/59) 7.37 0.006024 0.044019
GO:0061575 cyclin-dependent protein serine/threonine kinase activator activity 1.69% (1/59) 7.37 0.006024 0.044019
GO:1901409 positive regulation of phosphorylation of RNA polymerase II C-terminal domain 1.69% (1/59) 7.37 0.006024 0.044019
GO:2001163 regulation of phosphorylation of RNA polymerase II C-terminal domain serine 2 residues 1.69% (1/59) 7.37 0.006024 0.044019
GO:2001165 positive regulation of phosphorylation of RNA polymerase II C-terminal domain serine 2 residues 1.69% (1/59) 7.37 0.006024 0.044019
GO:0005775 vacuolar lumen 3.39% (2/59) 4.11 0.006094 0.044336
GO:0000049 tRNA binding 3.39% (2/59) 4.16 0.005642 0.044547
GO:0043484 regulation of RNA splicing 5.08% (3/59) 3.01 0.006175 0.044731
GO:0031983 vesicle lumen 3.39% (2/59) 4.14 0.005791 0.044873
GO:0034774 secretory granule lumen 3.39% (2/59) 4.14 0.005791 0.044873
GO:0060205 cytoplasmic vesicle lumen 3.39% (2/59) 4.14 0.005791 0.044873
GO:0006406 mRNA export from nucleus 3.39% (2/59) 4.09 0.006249 0.045065
GO:1990234 transferase complex 10.17% (6/59) 1.88 0.005765 0.045302
GO:0030117 membrane coat 3.39% (2/59) 4.07 0.006405 0.045992
GO:0031399 regulation of protein modification process 10.17% (6/59) 1.84 0.006563 0.046725
GO:0070727 cellular macromolecule localization 13.56% (8/59) 1.51 0.006555 0.046869
GO:0043167 ion binding 32.2% (19/59) 0.83 0.006617 0.046908
GO:0051128 regulation of cellular component organization 15.25% (9/59) 1.39 0.00665 0.046941
GO:0030198 extracellular matrix organization 3.39% (2/59) 4.03 0.006722 0.047055
GO:0097367 carbohydrate derivative binding 16.95% (10/59) 1.3 0.006704 0.047123
GO:0043062 extracellular structure organization 3.39% (2/59) 4.01 0.006884 0.047784
GO:0071005 U2-type precatalytic spliceosome 3.39% (2/59) 4.01 0.006884 0.047784
GO:0010639 negative regulation of organelle organization 5.08% (3/59) 2.91 0.007572 0.047967
GO:0090307 mitotic spindle assembly 3.39% (2/59) 3.95 0.007547 0.047988
GO:0090303 positive regulation of wound healing 1.69% (1/59) 7.05 0.007525 0.048031
GO:0061026 cardiac muscle tissue regeneration 1.69% (1/59) 7.05 0.007525 0.048031
GO:0090594 inflammatory response to wounding 1.69% (1/59) 7.05 0.007525 0.048031
GO:0035115 embryonic forelimb morphogenesis 1.69% (1/59) 7.05 0.007525 0.048031
GO:0035799 ureter maturation 1.69% (1/59) 7.05 0.007525 0.048031
GO:0048384 retinoic acid receptor signaling pathway 1.69% (1/59) 7.05 0.007525 0.048031
GO:0048799 animal organ maturation 1.69% (1/59) 7.05 0.007525 0.048031
GO:0090242 retinoic acid receptor signaling pathway involved in somitogenesis 1.69% (1/59) 7.05 0.007525 0.048031
GO:0000301 retrograde transport, vesicle recycling within Golgi 1.69% (1/59) 7.05 0.007525 0.048031
GO:1900125 regulation of hyaluronan biosynthetic process 1.69% (1/59) 7.05 0.007525 0.048031
GO:1900126 negative regulation of hyaluronan biosynthetic process 1.69% (1/59) 7.05 0.007525 0.048031
GO:0036120 cellular response to platelet-derived growth factor stimulus 1.69% (1/59) 7.05 0.007525 0.048031
GO:0009383 rRNA (cytosine-C5-)-methyltransferase activity 1.69% (1/59) 7.05 0.007525 0.048031
GO:0060717 chorion development 1.69% (1/59) 7.05 0.007525 0.048031
GO:1903867 extraembryonic membrane development 1.69% (1/59) 7.05 0.007525 0.048031
GO:0071232 cellular response to histidine 1.69% (1/59) 7.05 0.007525 0.048031
GO:0072559 NLRP3 inflammasome complex 1.69% (1/59) 7.05 0.007525 0.048031
GO:1900227 positive regulation of NLRP3 inflammasome complex assembly 1.69% (1/59) 7.05 0.007525 0.048031
GO:0009328 phenylalanine-tRNA ligase complex 1.69% (1/59) 7.05 0.007525 0.048031
GO:0007346 regulation of mitotic cell cycle 6.78% (4/59) 2.4 0.006962 0.048128
GO:0042327 positive regulation of phosphorylation 5.08% (3/59) 2.9 0.007651 0.04828
GO:0034250 positive regulation of cellular amide metabolic process 5.08% (3/59) 2.95 0.007038 0.04845
GO:0035196 miRNA processing 3.39% (2/59) 3.93 0.007717 0.048514
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_260 0.008 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_266 0.009 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_8 0.015 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_33 0.007 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_34 0.007 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_38 0.019 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_59 0.017 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_70 0.031 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_92 0.01 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_96 0.042 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_103 0.009 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_114 0.017 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_129 0.007 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_163 0.01 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_167 0.009 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_175 0.008 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_179 0.007 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_182 0.009 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_202 0.008 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_211 0.009 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_217 0.007 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_221 0.008 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_236 0.008 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_237 0.008 Orthogroups with 8 Potato genotypes Compare
Sequences (59) (download table)

InterPro Domains

GO Terms

Family Terms