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  5. SOLTUB.AGRIA.G00000012816

SOLTUB.AGRIA.G00000012816


Description : 60S ribosomal protein L28


Gene families : OG_02_0019329 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000012816
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_194

Target Alias Description ECC score Gene Family Method Actions
SOLTUB.AGRIA.G00000012787 No alias 60S ribosomal protein L28 0.14 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000012787 No alias 60S ribosomal protein L28 0.14 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000012787 No alias 60S ribosomal protein L28 0.14 Orthogroups with 8 Potato genotypes

Type GO Term Name Evidence Source
MF GO:0003729 mRNA binding IEA AHRD
MF GO:0003735 structural constituent of ribosome IEA AHRD
CC GO:0005618 cell wall IEA AHRD
CC GO:0005654 nucleoplasm IEA AHRD
CC GO:0005730 nucleolus IEA AHRD
CC GO:0005886 plasma membrane IEA AHRD
BP GO:0006412 translation IEA AHRD
CC GO:0009506 plasmodesma IEA AHRD
CC GO:0009507 chloroplast IEA AHRD
BP GO:0009955 adaxial/abaxial pattern specification IEA AHRD
BP GO:0009965 leaf morphogenesis IEA AHRD
CC GO:0022625 cytosolic large ribosomal subunit IEA AHRD
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Type GO Term Name Evidence Source
MF GO:0004674 protein serine/threonine kinase activity IEP Predict GO terms from Neighborhoods
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Predict GO terms from Neighborhoods
BP GO:0006979 response to oxidative stress IEP Predict GO terms from Neighborhoods
BP GO:0007569 obsolete cell aging IEP Predict GO terms from Neighborhoods
BP GO:0010469 regulation of signaling receptor activity IEP Predict GO terms from Neighborhoods
BP GO:0030518 intracellular steroid hormone receptor signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0030521 androgen receptor signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0030522 intracellular receptor signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0033574 response to testosterone IEP Predict GO terms from Neighborhoods
BP GO:0034599 cellular response to oxidative stress IEP Predict GO terms from Neighborhoods
BP GO:0043401 steroid hormone mediated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0044093 positive regulation of molecular function IEP Predict GO terms from Neighborhoods
BP GO:0051090 regulation of DNA-binding transcription factor activity IEP Predict GO terms from Neighborhoods
BP GO:0051091 positive regulation of DNA-binding transcription factor activity IEP Predict GO terms from Neighborhoods
BP GO:0062197 cellular response to chemical stress IEP Predict GO terms from Neighborhoods
BP GO:0071310 cellular response to organic substance IEP Predict GO terms from Neighborhoods
BP GO:0071394 cellular response to testosterone stimulus IEP Predict GO terms from Neighborhoods
BP GO:0071396 cellular response to lipid IEP Predict GO terms from Neighborhoods
BP GO:0071407 cellular response to organic cyclic compound IEP Predict GO terms from Neighborhoods
BP GO:1901654 response to ketone IEP Predict GO terms from Neighborhoods
BP GO:1901655 cellular response to ketone IEP Predict GO terms from Neighborhoods
BP GO:1901701 cellular response to oxygen-containing compound IEP Predict GO terms from Neighborhoods
BP GO:2000273 positive regulation of signaling receptor activity IEP Predict GO terms from Neighborhoods
BP GO:2000825 positive regulation of androgen receptor activity IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR029004 L28e/Mak16 8 128
No external refs found!