SOLTUB.AGRIA.G00000012929


Description : Pectinesterase


Gene families : OG_02_0008761 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000012929
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_6


Type GO Term Name Evidence Source
MF GO:0003729 mRNA binding IEA AHRD
MF GO:0005515 protein binding IEA AHRD
CC GO:0005618 cell wall IEA AHRD
CC GO:0005768 endosome IEA AHRD
CC GO:0005774 vacuolar membrane IEA AHRD
CC GO:0005802 trans-Golgi network IEA AHRD
CC GO:0005829 cytosol IEA AHRD
CC GO:0005886 plasma membrane IEA AHRD
CC GO:0009506 plasmodesma IEA AHRD
MF GO:0030599 pectinesterase activity IEA AHRD
MF GO:0046910 pectinesterase inhibitor activity IEA AHRD
CC GO:0048046 apoplast IEA AHRD
BP GO:0050829 defense response to Gram-negative bacterium IEA AHRD
MF GO:0051722 protein C-terminal methylesterase activity IEA AHRD
BP GO:1902066 regulation of cell wall pectin metabolic process IEA AHRD
Type GO Term Name Evidence Source
BP GO:0009832 plant-type cell wall biogenesis IEP Predict GO terms from Neighborhoods
BP GO:0009834 plant-type secondary cell wall biogenesis IEP Predict GO terms from Neighborhoods
BP GO:0042546 cell wall biogenesis IEP Predict GO terms from Neighborhoods
BP GO:0044085 cellular component biogenesis IEP Predict GO terms from Neighborhoods
MF GO:0051287 NAD binding IEP Predict GO terms from Neighborhoods
BP GO:0071554 cell wall organization or biogenesis IEP Predict GO terms from Neighborhoods
BP GO:0071669 plant-type cell wall organization or biogenesis IEP Predict GO terms from Neighborhoods
BP GO:0071840 cellular component organization or biogenesis IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR011050 Pectin_lyase_fold/virulence 257 564
IPR006501 Pectinesterase_inhib_dom 38 218
IPR006501 Pectinesterase_inhib_dom 69 215
IPR035513 Invertase/methylesterase_inhib 71 220
IPR000070 Pectinesterase_cat 260 553
No external refs found!