SOLTUB.AGRIA.G00000013121

Description : AP2/B3 transcription factor family protein

Gene families : OG_02_0014014 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000013121
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_163

Type	GO Term	Name	Evidence	Source
MF	GO:0000976	transcription cis-regulatory region binding	IEA	AHRD
MF	GO:0001067	transcription regulatory region nucleic acid binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003690	double-stranded DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	AHRD
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	AHRD
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	AHRD
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	None	Extended
BP	GO:0006790	sulfur compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009314	response to radiation	None	Extended
BP	GO:0009416	response to light stimulus	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009648	photoperiodism	None	Extended
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009741	response to brassinosteroid	IEA	AHRD
BP	GO:0009791	post-embryonic development	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009890	negative regulation of biosynthetic process	None	Extended
BP	GO:0009892	negative regulation of metabolic process	None	Extended
BP	GO:0009909	regulation of flower development	None	Extended
BP	GO:0009910	negative regulation of flower development	IEA	AHRD
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010558	negative regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010605	negative regulation of macromolecule metabolic process	None	Extended
BP	GO:0014070	response to organic cyclic compound	None	Extended
BP	GO:0016143	S-glycoside metabolic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0019748	secondary metabolic process	None	Extended
BP	GO:0019757	glycosinolate metabolic process	None	Extended
BP	GO:0019760	glucosinolate metabolic process	IEA	AHRD
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0022603	regulation of anatomical structure morphogenesis	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031324	negative regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0031327	negative regulation of cellular biosynthetic process	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0033993	response to lipid	None	Extended
BP	GO:0040008	regulation of growth	None	Extended
BP	GO:0042221	response to chemical	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0045892	negative regulation of DNA-templated transcription	IEA	AHRD
BP	GO:0045934	negative regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0048364	root development	None	Extended
BP	GO:0048519	negative regulation of biological process	None	Extended
BP	GO:0048523	negative regulation of cellular process	None	Extended
BP	GO:0048527	lateral root development	IEA	AHRD
BP	GO:0048528	post-embryonic root development	None	Extended
BP	GO:0048573	photoperiodism, flowering	IEA	AHRD
BP	GO:0048580	regulation of post-embryonic development	None	Extended
BP	GO:0048581	negative regulation of post-embryonic development	None	Extended
BP	GO:0048638	regulation of developmental growth	None	Extended
BP	GO:0048831	regulation of shoot system development	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050793	regulation of developmental process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051093	negative regulation of developmental process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051172	negative regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051239	regulation of multicellular organismal process	None	Extended
BP	GO:0051241	negative regulation of multicellular organismal process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0051253	negative regulation of RNA metabolic process	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0070887	cellular response to chemical stimulus	IEA	AHRD
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:0080113	regulation of seed growth	IEA	AHRD
BP	GO:0080167	response to karrikin	IEA	AHRD
BP	GO:0090696	post-embryonic plant organ development	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:0099402	plant organ development	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1900618	regulation of shoot system morphogenesis	None	Extended
BP	GO:1901135	carbohydrate derivative metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901371	regulation of leaf morphogenesis	IEA	AHRD
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901657	glycosyl compound metabolic process	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended
BP	GO:1902679	negative regulation of RNA biosynthetic process	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:1903507	negative regulation of nucleic acid-templated transcription	None	Extended
BP	GO:1905421	regulation of plant organ morphogenesis	None	Extended
MF	GO:1990837	sequence-specific double-stranded DNA binding	None	Extended
BP	GO:2000026	regulation of multicellular organismal development	None	Extended
BP	GO:2000241	regulation of reproductive process	None	Extended
BP	GO:2000242	negative regulation of reproductive process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0000977	RNA polymerase II transcription regulatory region sequence-specific DNA binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	IEP	Predict GO terms from Neighborhoods
MF	GO:0000987	cis-regulatory region sequence-specific DNA binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0003682	chromatin binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0004499	N,N-dimethylaniline monooxygenase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004866	endopeptidase inhibitor activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004867	serine-type endopeptidase inhibitor activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0006778	porphyrin-containing compound metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006779	porphyrin-containing compound biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006783	heme biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0007602	phototransduction	IEP	Predict GO terms from Neighborhoods
BP	GO:0007623	circadian rhythm	IEP	Predict GO terms from Neighborhoods
MF	GO:0008146	sulfotransferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0009566	fertilization	IEP	Predict GO terms from Neighborhoods
BP	GO:0009567	double fertilization forming a zygote and endosperm	IEP	Predict GO terms from Neighborhoods
BP	GO:0009581	detection of external stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0009582	detection of abiotic stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0009583	detection of light stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0009585	red, far-red light phototransduction	IEP	Predict GO terms from Neighborhoods
BP	GO:0009606	tropism	IEP	Predict GO terms from Neighborhoods
BP	GO:0009629	response to gravity	IEP	Predict GO terms from Neighborhoods
BP	GO:0009630	gravitropism	IEP	Predict GO terms from Neighborhoods
BP	GO:0009637	response to blue light	IEP	Predict GO terms from Neighborhoods
BP	GO:0009638	phototropism	IEP	Predict GO terms from Neighborhoods
BP	GO:0009639	response to red or far red light	IEP	Predict GO terms from Neighborhoods
BP	GO:0009641	shade avoidance	IEP	Predict GO terms from Neighborhoods
BP	GO:0009642	response to light intensity	IEP	Predict GO terms from Neighborhoods
BP	GO:0009645	response to low light intensity stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0009683	indoleacetic acid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009684	indoleacetic acid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009692	ethylene metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009693	ethylene biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009704	de-etiolation	IEP	Predict GO terms from Neighborhoods
BP	GO:0009735	response to cytokinin	IEP	Predict GO terms from Neighborhoods
BP	GO:0009740	gibberellic acid mediated signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0009742	brassinosteroid mediated signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0009755	hormone-mediated signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0009851	auxin biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009900	dehiscence	IEP	Predict GO terms from Neighborhoods
BP	GO:0009901	anther dehiscence	IEP	Predict GO terms from Neighborhoods
BP	GO:0009959	negative gravitropism	IEP	Predict GO terms from Neighborhoods
CC	GO:0010005	cortical microtubule, transverse to long axis	IEP	Predict GO terms from Neighborhoods
BP	GO:0010017	red or far-red light signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0010029	regulation of seed germination	IEP	Predict GO terms from Neighborhoods
BP	GO:0010031	circumnutation	IEP	Predict GO terms from Neighborhoods
BP	GO:0010047	fruit dehiscence	IEP	Predict GO terms from Neighborhoods
BP	GO:0010099	regulation of photomorphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0010100	negative regulation of photomorphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0010109	regulation of photosynthesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0010114	response to red light	IEP	Predict GO terms from Neighborhoods
BP	GO:0010161	red light signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0010187	negative regulation of seed germination	IEP	Predict GO terms from Neighborhoods
BP	GO:0010218	response to far red light	IEP	Predict GO terms from Neighborhoods
BP	GO:0010244	response to low fluence blue light stimulus by blue low-fluence system	IEP	Predict GO terms from Neighborhoods
MF	GO:0010313	phytochrome binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0010422	regulation of brassinosteroid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010476	gibberellin mediated signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0010600	regulation of auxin biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010817	regulation of hormone levels	IEP	Predict GO terms from Neighborhoods
BP	GO:0010893	positive regulation of steroid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010928	regulation of auxin mediated signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0010951	negative regulation of endopeptidase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0015994	chlorophyll metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0015995	chlorophyll biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0016049	cell growth	IEP	Predict GO terms from Neighborhoods
BP	GO:0016131	brassinosteroid metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0016782	transferase activity, transferring sulphur-containing groups	IEP	Predict GO terms from Neighborhoods
MF	GO:0016831	carboxy-lyase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0018130	heterocycle biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0019218	regulation of steroid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0019438	aromatic compound biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0022412	cellular process involved in reproduction in multicellular organism	IEP	Predict GO terms from Neighborhoods
MF	GO:0030414	peptidase inhibitor activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0031537	regulation of anthocyanin metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0031539	positive regulation of anthocyanin metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0031624	ubiquitin conjugating enzyme binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0032260	response to jasmonic acid stimulus involved in jasmonic acid and ethylene-dependent systemic resistance	IEP	Predict GO terms from Neighborhoods
BP	GO:0032350	regulation of hormone metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0032352	positive regulation of hormone metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0033013	tetrapyrrole metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0033014	tetrapyrrole biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0040007	growth	IEP	Predict GO terms from Neighborhoods
BP	GO:0042168	heme metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0042440	pigment metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0042445	hormone metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0042548	regulation of photosynthesis, light reaction	IEP	Predict GO terms from Neighborhoods
BP	GO:0043401	steroid hormone mediated signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0043449	cellular alkene metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0043450	alkene biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0043467	regulation of generation of precursor metabolites and energy	IEP	Predict GO terms from Neighborhoods
BP	GO:0044271	cellular nitrogen compound biosynthetic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0044390	ubiquitin-like protein conjugating enzyme binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0045824	negative regulation of innate immune response	IEP	Predict GO terms from Neighborhoods
BP	GO:0045940	positive regulation of steroid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046148	pigment biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046620	regulation of organ growth	IEP	Predict GO terms from Neighborhoods
BP	GO:0046621	negative regulation of organ growth	IEP	Predict GO terms from Neighborhoods
BP	GO:0046885	regulation of hormone biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046886	positive regulation of hormone biosynthetic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0046983	protein dimerization activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0047364	desulfoglucosinolate sulfotransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0047434	indolepyruvate decarboxylase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0048235	pollen sperm cell differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0048437	floral organ development	IEP	Predict GO terms from Neighborhoods
BP	GO:0048440	carpel development	IEP	Predict GO terms from Neighborhoods
BP	GO:0048444	floral organ morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0048446	petal morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0048511	rhythmic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0048585	negative regulation of response to stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0048588	developmental cell growth	IEP	Predict GO terms from Neighborhoods
BP	GO:0048589	developmental growth	IEP	Predict GO terms from Neighborhoods
BP	GO:0048609	multicellular organismal reproductive process	IEP	Predict GO terms from Neighborhoods
BP	GO:0048767	root hair elongation	IEP	Predict GO terms from Neighborhoods
BP	GO:0048827	phyllome development	IEP	Predict GO terms from Neighborhoods
BP	GO:0050810	regulation of steroid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0050879	multicellular organismal movement	IEP	Predict GO terms from Neighborhoods
BP	GO:0051606	detection of stimulus	IEP	Predict GO terms from Neighborhoods
CC	GO:0055028	cortical microtubule	IEP	Predict GO terms from Neighborhoods
BP	GO:0060560	developmental growth involved in morphogenesis	IEP	Predict GO terms from Neighborhoods
MF	GO:0061135	endopeptidase regulator activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0065008	regulation of biological quality	IEP	Predict GO terms from Neighborhoods
BP	GO:0071214	cellular response to abiotic stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0071478	cellular response to radiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0071482	cellular response to light stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0071489	cellular response to red or far red light	IEP	Predict GO terms from Neighborhoods
BP	GO:0071491	cellular response to red light	IEP	Predict GO terms from Neighborhoods
BP	GO:0080006	internode patterning	IEP	Predict GO terms from Neighborhoods
MF	GO:0080118	brassinosteroid sulfotransferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0080147	root hair cell development	IEP	Predict GO terms from Neighborhoods
BP	GO:0090030	regulation of steroid hormone biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0090227	regulation of red or far-red light signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0090229	negative regulation of red or far-red light signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0090354	regulation of auxin metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0103075	indole-3-pyruvate monooxygenase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0104004	cellular response to environmental stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0120251	hydrocarbon biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0120252	hydrocarbon metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0120254	olefinic compound metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0120255	olefinic compound biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1900140	regulation of seedling development	IEP	Predict GO terms from Neighborhoods
BP	GO:1900673	olefin metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1900674	olefin biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1901566	organonitrogen compound biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1902446	regulation of shade avoidance	IEP	Predict GO terms from Neighborhoods
BP	GO:1902448	positive regulation of shade avoidance	IEP	Predict GO terms from Neighborhoods
BP	GO:1990110	callus formation	IEP	Predict GO terms from Neighborhoods
MF	GO:1990135	flavonoid sulfotransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:1990841	promoter-specific chromatin binding	IEP	Predict GO terms from Neighborhoods
BP	GO:2000024	regulation of leaf development	IEP	Predict GO terms from Neighborhoods
BP	GO:2000030	regulation of response to red or far red light	IEP	Predict GO terms from Neighborhoods
BP	GO:2000488	positive regulation of brassinosteroid biosynthetic process	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR015300	DNA-bd_pseudobarrel_sf	53	143
IPR016177	DNA-bd_dom_sf	6	53
IPR003340	B3_DNA-bd	54	143
IPR001471	AP2/ERF_dom	6	53

External Links

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SOLTUB.AGRIA.G00000013121

Expression Profile

Co-expression Networks

Functional Annotation