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  5. SOLTUB.AGRIA.G00000013162

SOLTUB.AGRIA.G00000013162


Description : Disease resistance protein RPS5


Gene families : OG_02_0000020 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000013162
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_78

Target Alias Description ECC score Gene Family Method Actions
SOLTUB.AGRIA.G00000013872 No alias Disease resistance protein (CC-NBS-LRR class) family 0.33 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000013872 No alias Disease resistance protein (CC-NBS-LRR class) family 0.33 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000013872 No alias Disease resistance protein (CC-NBS-LRR class) family 0.33 Orthogroups with 8 Potato genotypes

Type GO Term Name Evidence Source
MF GO:0005488 binding IEA AHRD
BP GO:0006952 defense response IEA AHRD
BP GO:0009416 response to light stimulus IEA AHRD
CC GO:0016020 membrane IEA AHRD
BP GO:0051707 response to other organism IEA AHRD
Toggle parental
Type GO Term Name Evidence Source
BP GO:0010167 response to nitrate IEP Predict GO terms from Neighborhoods
MF GO:0016853 isomerase activity IEP Predict GO terms from Neighborhoods
BP GO:0080033 response to nitrite IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR027417 P-loop_NTPase 12 249
IPR002182 NB-ARC 24 59
IPR002182 NB-ARC 77 237
No external refs found!