Coexpression cluster: Cluster_78 (HCCA Clusters (HRR 50 & PCC 0.5))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0005576 extracellular region 24.37% (29/119) 2.39 0.0 0.0
GO:0016746 acyltransferase activity 15.97% (19/119) 3.18 0.0 0.0
GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups 14.29% (17/119) 3.15 0.0 0.0
GO:0004312 fatty acid synthase activity 6.72% (8/119) 5.13 0.0 0.0
GO:0009698 phenylpropanoid metabolic process 16.81% (20/119) 2.57 0.0 0.0
GO:0019748 secondary metabolic process 21.01% (25/119) 2.11 0.0 0.0
GO:0042761 very long-chain fatty acid biosynthetic process 5.88% (7/119) 4.77 0.0 1e-06
GO:0006629 lipid metabolic process 24.37% (29/119) 1.7 0.0 2e-06
GO:0044550 secondary metabolite biosynthetic process 16.81% (20/119) 2.21 0.0 2e-06
GO:0006631 fatty acid metabolic process 12.61% (15/119) 2.62 0.0 3e-06
GO:0016297 acyl-[acyl-carrier-protein] hydrolase activity 4.2% (5/119) 5.87 0.0 3e-06
GO:0000038 very long-chain fatty acid metabolic process 5.88% (7/119) 4.44 0.0 4e-06
GO:0009699 phenylpropanoid biosynthetic process 13.45% (16/119) 2.46 0.0 4e-06
GO:0048046 apoplast 13.45% (16/119) 2.44 0.0 4e-06
GO:0010345 suberin biosynthetic process 6.72% (8/119) 3.67 0.0 2.2e-05
GO:0042335 cuticle development 5.04% (6/119) 4.39 0.0 3.8e-05
GO:0016787 hydrolase activity 26.05% (31/119) 1.35 1e-06 6.2e-05
GO:0032787 monocarboxylic acid metabolic process 15.13% (18/119) 1.93 1e-06 8.2e-05
GO:0010025 wax biosynthetic process 5.04% (6/119) 4.01 2e-06 0.00015
GO:0010226 response to lithium ion 3.36% (4/119) 5.41 2e-06 0.000161
GO:0016049 cell growth 15.13% (18/119) 1.83 3e-06 0.000196
GO:0010166 wax metabolic process 5.04% (6/119) 3.89 4e-06 0.000213
GO:0110165 cellular anatomical entity 79.83% (95/119) 0.41 4e-06 0.000216
GO:1901568 fatty acid derivative metabolic process 5.88% (7/119) 3.43 4e-06 0.000241
GO:1901570 fatty acid derivative biosynthetic process 5.04% (6/119) 3.81 5e-06 0.000263
GO:0016790 thiolester hydrolase activity 4.2% (5/119) 4.27 6e-06 0.000334
GO:0010191 mucilage metabolic process 5.88% (7/119) 3.3 8e-06 0.000396
GO:0060560 developmental growth involved in morphogenesis 13.45% (16/119) 1.85 1e-05 0.000404
GO:1900552 asperfuranone metabolic process 1.68% (2/119) 8.36 9e-06 0.00041
GO:1900554 asperfuranone biosynthetic process 1.68% (2/119) 8.36 9e-06 0.00041
GO:1901362 organic cyclic compound biosynthetic process 19.33% (23/119) 1.44 1e-05 0.000414
GO:0005575 cellular_component 79.83% (95/119) 0.39 9e-06 0.000415
GO:0006633 fatty acid biosynthetic process 6.72% (8/119) 2.94 1.1e-05 0.000442
GO:0003674 molecular_function 78.15% (93/119) 0.39 1.6e-05 0.000619
GO:0010103 stomatal complex morphogenesis 4.2% (5/119) 4.01 1.6e-05 0.000622
GO:0016042 lipid catabolic process 7.56% (9/119) 2.62 1.7e-05 0.000642
GO:0016788 hydrolase activity, acting on ester bonds 13.45% (16/119) 1.77 1.9e-05 0.000689
GO:0090626 plant epidermis morphogenesis 4.2% (5/119) 3.94 2e-05 0.000702
GO:0009609 response to symbiotic bacterium 4.2% (5/119) 3.89 2.4e-05 0.000816
GO:0048359 mucilage metabolic process involved in seed coat development 5.04% (6/119) 3.37 2.7e-05 0.000896
GO:0003824 catalytic activity 51.26% (61/119) 0.63 2.9e-05 0.000946
GO:0008150 biological_process 78.99% (94/119) 0.36 3.5e-05 0.001105
GO:0005618 cell wall 14.29% (17/119) 1.61 4.1e-05 0.00126
GO:0090378 seed trichome elongation 3.36% (4/119) 4.36 4.5e-05 0.001369
GO:0009922 fatty acid elongase activity 2.52% (3/119) 5.36 5.3e-05 0.001579
GO:0004474 malate synthase activity 1.68% (2/119) 7.36 5.5e-05 0.001596
GO:0019438 aromatic compound biosynthetic process 15.97% (19/119) 1.45 6.1e-05 0.001736
GO:0040007 growth 15.13% (18/119) 1.49 7e-05 0.00195
GO:0009733 response to auxin 10.08% (12/119) 1.94 7.2e-05 0.001963
GO:0050896 response to stimulus 56.3% (67/119) 0.54 7.6e-05 0.002035
GO:0030312 external encapsulating structure 14.29% (17/119) 1.53 8.2e-05 0.002137
GO:0045733 acetate catabolic process 1.68% (2/119) 7.04 9.1e-05 0.002349
GO:0000902 cell morphogenesis 12.61% (15/119) 1.64 9.3e-05 0.002358
GO:0050734 hydroxycinnamoyltransferase activity 2.52% (3/119) 5.04 0.000105 0.002604
GO:0008289 lipid binding 7.56% (9/119) 2.27 0.000111 0.00269
GO:0009653 anatomical structure morphogenesis 20.17% (24/119) 1.18 0.000115 0.002708
GO:0048589 developmental growth 13.45% (16/119) 1.55 0.000115 0.00274
GO:0032502 developmental process 42.86% (51/119) 0.67 0.000138 0.00317
GO:0019752 carboxylic acid metabolic process 15.13% (18/119) 1.38 0.000174 0.003881
GO:0009826 unidimensional cell growth 10.08% (12/119) 1.81 0.000171 0.003885
GO:0044281 small molecule metabolic process 21.01% (25/119) 1.1 0.000192 0.004204
GO:0080167 response to karrikin 7.56% (9/119) 2.14 0.000217 0.004686
GO:0019395 fatty acid oxidation 3.36% (4/119) 3.73 0.000246 0.005219
GO:0010430 fatty acid omega-oxidation 1.68% (2/119) 6.36 0.000254 0.005312
GO:0072330 monocarboxylic acid biosynthetic process 7.56% (9/119) 2.09 0.000278 0.005728
GO:0071704 organic substance metabolic process 52.94% (63/119) 0.52 0.000284 0.005748
GO:0016713 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced iron-sulfur protein as one donor, and incorporation of one atom of oxygen 2.52% (3/119) 4.52 0.000311 0.006199
GO:0008374 O-acyltransferase activity 5.04% (6/119) 2.72 0.000326 0.006418
GO:0009608 response to symbiont 5.04% (6/119) 2.7 0.000344 0.006573
GO:0052689 carboxylic ester hydrolase activity 5.88% (7/119) 2.43 0.000342 0.006621
GO:0044255 cellular lipid metabolic process 15.13% (18/119) 1.3 0.000357 0.006627
GO:0006950 response to stress 42.86% (51/119) 0.61 0.000355 0.006677
GO:0044419 biological process involved in interspecies interaction between organisms 27.73% (33/119) 0.85 0.000407 0.007359
GO:0009897 external side of plasma membrane 3.36% (4/119) 3.54 0.000407 0.007456
GO:0043436 oxoacid metabolic process 15.97% (19/119) 1.23 0.000421 0.007505
GO:0034440 lipid oxidation 3.36% (4/119) 3.48 0.00048 0.008436
GO:0009607 response to biotic stimulus 28.57% (34/119) 0.81 0.000537 0.009317
GO:0050525 cutinase activity 1.68% (2/119) 5.77 0.000595 0.010192
GO:0006833 water transport 3.36% (4/119) 3.3 0.000752 0.012722
GO:0102336 3-oxo-arachidoyl-CoA synthase activity 1.68% (2/119) 5.55 0.000817 0.013154
GO:0102337 3-oxo-cerotoyl-CoA synthase activity 1.68% (2/119) 5.55 0.000817 0.013154
GO:0102338 3-oxo-lignoceronyl-CoA synthase activity 1.68% (2/119) 5.55 0.000817 0.013154
GO:0102756 very-long-chain 3-ketoacyl-CoA synthase activity 1.68% (2/119) 5.55 0.000817 0.013154
GO:0006082 organic acid metabolic process 15.97% (19/119) 1.15 0.000831 0.013223
GO:0106371 fluorescent chlorophyll catabolite monooxygenase (deformylase) activity 1.68% (2/119) 5.45 0.00094 0.014451
GO:0080133 midchain alkane hydroxylase activity 1.68% (2/119) 5.45 0.00094 0.014451
GO:0042044 fluid transport 3.36% (4/119) 3.22 0.000934 0.014698
GO:0006952 defense response 24.37% (29/119) 0.85 0.00099 0.015047
GO:0051707 response to other organism 26.05% (31/119) 0.8 0.001147 0.017229
GO:0030639 polyketide biosynthetic process 1.68% (2/119) 5.27 0.001213 0.018021
GO:0009610 response to symbiotic fungus 4.2% (5/119) 2.65 0.001278 0.01857
GO:0010102 lateral root morphogenesis 3.36% (4/119) 3.1 0.001264 0.018572
GO:0010101 post-embryonic root morphogenesis 3.36% (4/119) 3.08 0.001326 0.018661
GO:0006869 lipid transport 5.04% (6/119) 2.33 0.001312 0.018662
GO:0016753 O-sinapoyltransferase activity 1.68% (2/119) 5.19 0.001362 0.018774
GO:0016754 sinapoylglucose-malate O-sinapoyltransferase activity 1.68% (2/119) 5.19 0.001362 0.018774
GO:0008152 metabolic process 53.78% (64/119) 0.44 0.001311 0.018841
GO:0010023 proanthocyanidin biosynthetic process 2.52% (3/119) 3.77 0.001408 0.019208
GO:0080001 mucilage extrusion from seed coat 3.36% (4/119) 3.06 0.001423 0.019214
GO:0003958 NADPH-hemoprotein reductase activity 1.68% (2/119) 5.11 0.001519 0.020312
GO:0005737 cytoplasm 18.49% (22/119) 0.98 0.001544 0.020441
GO:0000904 cell morphogenesis involved in differentiation 8.4% (10/119) 1.61 0.001696 0.021394
GO:0015976 carbon utilization 1.68% (2/119) 5.04 0.001685 0.021452
GO:0016752 sinapoyltransferase activity 1.68% (2/119) 5.04 0.001685 0.021452
GO:0033304 chlorophyll a metabolic process 1.68% (2/119) 5.04 0.001685 0.021452
GO:0033310 chlorophyll a catabolic process 1.68% (2/119) 5.04 0.001685 0.021452
GO:0043207 response to external biotic stimulus 26.89% (32/119) 0.75 0.001738 0.021715
GO:0090693 plant organ senescence 6.72% (8/119) 1.85 0.001786 0.02211
GO:0005615 extracellular space 5.04% (6/119) 2.21 0.001995 0.02447
GO:0006097 glyoxylate cycle 1.68% (2/119) 4.9 0.00204 0.024797
GO:0030258 lipid modification 3.36% (4/119) 2.88 0.002197 0.026464
GO:0046912 acyltransferase activity, acyl groups converted into alkyl on transfer 1.68% (2/119) 4.84 0.00223 0.02662
GO:0004252 serine-type endopeptidase activity 3.36% (4/119) 2.86 0.002334 0.027374
GO:0010252 auxin homeostasis 3.36% (4/119) 2.86 0.002334 0.027374
GO:0046394 carboxylic acid biosynthetic process 8.4% (10/119) 1.54 0.002467 0.028192
GO:0034312 diol biosynthetic process 1.68% (2/119) 4.77 0.002428 0.028226
GO:0009058 biosynthetic process 26.05% (31/119) 0.73 0.002462 0.028376
GO:0042538 hyperosmotic salinity response 4.2% (5/119) 2.4 0.002694 0.030525
GO:0005326 neurotransmitter transmembrane transporter activity 0.84% (1/119) 8.36 0.003044 0.030604
GO:0015874 norepinephrine transport 0.84% (1/119) 8.36 0.003044 0.030604
GO:0048241 epinephrine transport 0.84% (1/119) 8.36 0.003044 0.030604
GO:0060456 positive regulation of digestive system process 0.84% (1/119) 8.36 0.003044 0.030604
GO:0060730 regulation of intestinal epithelial structure maintenance 0.84% (1/119) 8.36 0.003044 0.030604
GO:0060731 positive regulation of intestinal epithelial structure maintenance 0.84% (1/119) 8.36 0.003044 0.030604
GO:0070715 sodium-dependent organic cation transport 0.84% (1/119) 8.36 0.003044 0.030604
GO:1900749 (R)-carnitine transport 0.84% (1/119) 8.36 0.003044 0.030604
GO:1901235 (R)-carnitine transmembrane transporter activity 0.84% (1/119) 8.36 0.003044 0.030604
GO:1902270 (R)-carnitine transmembrane transport 0.84% (1/119) 8.36 0.003044 0.030604
GO:0010074 maintenance of meristem identity 5.04% (6/119) 2.11 0.002795 0.031408
GO:0034311 diol metabolic process 1.68% (2/119) 4.66 0.002848 0.031464
GO:0048868 pollen tube development 2.52% (3/119) 3.42 0.002837 0.031605
GO:0036377 arbuscular mycorrhizal association 3.36% (4/119) 2.77 0.002941 0.032226
GO:0090698 post-embryonic plant morphogenesis 5.88% (7/119) 1.89 0.002967 0.032249
GO:0045229 external encapsulating structure organization 9.24% (11/119) 1.39 0.003311 0.032786
GO:0016653 oxidoreductase activity, acting on NAD(P)H, heme protein as acceptor 1.68% (2/119) 4.55 0.003299 0.032914
GO:1902645 tertiary alcohol biosynthetic process 1.68% (2/119) 4.5 0.003536 0.034763
GO:0044283 small molecule biosynthetic process 10.08% (12/119) 1.3 0.003623 0.035361
GO:0030638 polyketide metabolic process 1.68% (2/119) 4.41 0.004034 0.039082
GO:0048527 lateral root development 4.2% (5/119) 2.25 0.004186 0.040262
GO:1901576 organic substance biosynthetic process 24.37% (29/119) 0.71 0.00428 0.040877
GO:0031012 extracellular matrix 3.36% (4/119) 2.61 0.004317 0.040938
GO:0006083 acetate metabolic process 1.68% (2/119) 4.32 0.004562 0.042957
GO:0009605 response to external stimulus 30.25% (36/119) 0.6 0.004757 0.044475
GO:0016053 organic acid biosynthetic process 8.4% (10/119) 1.39 0.004955 0.046006
GO:0007267 cell-cell signaling 2.52% (3/119) 3.12 0.00505 0.046565
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_91 0.012 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_93 0.007 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_102 0.014 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_147 0.007 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_200 0.012 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_21 0.007 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_26 0.007 Orthogroups with 8 Potato genotypes Compare
Sequences (119) (download table)

InterPro Domains

GO Terms

Family Terms