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  5. SOLTUB.AGRIA.G00000013176

SOLTUB.AGRIA.G00000013176


Description : Disease resistance protein (CC-NBS-LRR class) family


Gene families : OG_02_0000020 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000013176
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_78

Target Alias Description ECC score Gene Family Method Actions
SOLTUB.AGRIA.G00000013872 No alias Disease resistance protein (CC-NBS-LRR class) family 0.5 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000013872 No alias Disease resistance protein (CC-NBS-LRR class) family 0.5 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000013872 No alias Disease resistance protein (CC-NBS-LRR class) family 0.5 Orthogroups with 8 Potato genotypes

Type GO Term Name Evidence Source
MF GO:0005488 binding IEA AHRD
BP GO:0006952 defense response IEA AHRD
CC GO:0110165 cellular anatomical entity IEA AHRD
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Type GO Term Name Evidence Source
BP GO:0009813 flavonoid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0010252 auxin homeostasis IEP Predict GO terms from Neighborhoods
MF GO:0015297 antiporter activity IEP Predict GO terms from Neighborhoods
BP GO:0042908 xenobiotic transport IEP Predict GO terms from Neighborhoods
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0046618 xenobiotic export from cell IEP Predict GO terms from Neighborhoods
BP GO:0048767 root hair elongation IEP Predict GO terms from Neighborhoods
BP GO:0140115 export across plasma membrane IEP Predict GO terms from Neighborhoods
BP GO:1990961 xenobiotic detoxification by transmembrane export across the plasma membrane IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR027417 P-loop_NTPase 144 408
IPR002182 NB-ARC 153 378
No external refs found!