Description : DNA double-strand break repair rad50 ATPase
Gene families : OG_02_0011958 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000001322 | |
| Cluster | HCCA Clusters (HRR 50 & PCC 0.5): Cluster_27 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | IEA | AHRD |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003913 | DNA photolyase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006874 | cellular calcium ion homeostasis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0007292 | female gamete generation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009581 | detection of external stimulus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009582 | detection of abiotic stimulus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009583 | detection of light stimulus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009625 | response to insect | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009638 | phototropism | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009639 | response to red or far red light | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009640 | photomorphogenesis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009641 | shade avoidance | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009644 | response to high light intensity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009645 | response to low light intensity stimulus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009649 | entrainment of circadian clock | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009682 | induced systemic resistance | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009683 | indoleacetic acid metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009684 | indoleacetic acid biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009759 | indole glucosinolate biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009785 | blue light signaling pathway | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009850 | auxin metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009851 | auxin biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0009881 | photoreceptor activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0009882 | blue light photoreceptor activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010112 | regulation of systemic acquired resistance | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010114 | response to red light | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010117 | photoprotection | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010218 | response to far red light | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010244 | response to low fluence blue light stimulus by blue low-fluence system | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010310 | regulation of hydrogen peroxide metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010343 | singlet oxygen-mediated programmed cell death | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010359 | regulation of anion channel activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010617 | circadian regulation of calcium ion oscillation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010817 | regulation of hormone levels | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0016605 | PML body | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0018298 | obsolete protein-chromophore linkage | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0030522 | intracellular receptor signaling pathway | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032411 | positive regulation of transporter activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032414 | positive regulation of ion transmembrane transporter activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032922 | circadian regulation of gene expression | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0034764 | positive regulation of transmembrane transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0034767 | positive regulation of ion transmembrane transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0036473 | cell death in response to oxidative stress | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042343 | indole glucosinolate metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042726 | flavin-containing compound metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042752 | regulation of circadian rhythm | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043153 | entrainment of circadian clock by photoperiod | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043270 | positive regulation of ion transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0044070 | regulation of anion transport | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0045171 | intercellular bridge | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0045172 | germline ring canal | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0046283 | anthocyanin-containing compound metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048477 | oogenesis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048571 | long-day photoperiodism | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048574 | long-day photoperiodism, flowering | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048830 | adventitious root development | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0050660 | flavin adenine dinucleotide binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051480 | regulation of cytosolic calcium ion concentration | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0052386 | cell wall thickening | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0052482 | defense response by cell wall thickening | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0052542 | defense response by callose deposition | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0052543 | callose deposition in cell wall | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0052544 | defense response by callose deposition in cell wall | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0055074 | calcium ion homeostasis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071000 | response to magnetism | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071483 | cellular response to blue light | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0071949 | FAD binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0072387 | flavin adenine dinucleotide metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0072503 | cellular divalent inorganic cation homeostasis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0097468 | programmed cell death in response to reactive oxygen species | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0102627 | parthenolide 3beta-hydroxylase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0102628 | costunolide 3beta-hydroxylase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1900618 | regulation of shoot system morphogenesis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1901332 | negative regulation of lateral root development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1901371 | regulation of leaf morphogenesis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1901529 | positive regulation of anion channel activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1901672 | positive regulation of systemic acquired resistance | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1902347 | response to strigolactone | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1902446 | regulation of shade avoidance | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1902448 | positive regulation of shade avoidance | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1903793 | positive regulation of anion transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1903959 | regulation of anion transmembrane transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1903961 | positive regulation of anion transmembrane transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1905421 | regulation of plant organ morphogenesis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2000023 | regulation of lateral root development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2000069 | regulation of post-embryonic root development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2000379 | positive regulation of reactive oxygen species metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2000652 | regulation of secondary cell wall biogenesis | IEP | Predict GO terms from Neighborhoods |
No InterPro domains available for this sequence
| No external refs found! |