1. Home
  2. Species
  3. Solanum tuberosum Agria
  4. Sequence
  5. SOLTUB.AGRIA.G00000013532

SOLTUB.AGRIA.G00000013532


Description : Protein FRIGIDA, putative


Gene families : OG_02_0014081 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000013532
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_45


Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA AHRD
BP GO:0009791 post-embryonic development IEA AHRD
BP GO:0048608 reproductive structure development IEA AHRD
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000122 negative regulation of transcription by RNA polymerase II IEP Predict GO terms from Neighborhoods
MF GO:0000217 DNA secondary structure binding IEP Predict GO terms from Neighborhoods
CC GO:0000228 nuclear chromosome IEP Predict GO terms from Neighborhoods
CC GO:0000785 chromatin IEP Predict GO terms from Neighborhoods
CC GO:0000793 condensed chromosome IEP Predict GO terms from Neighborhoods
CC GO:0000794 condensed nuclear chromosome IEP Predict GO terms from Neighborhoods
BP GO:0000910 cytokinesis IEP Predict GO terms from Neighborhoods
BP GO:0000911 cytokinesis by cell plate formation IEP Predict GO terms from Neighborhoods
BP GO:0000959 mitochondrial RNA metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0000977 RNA polymerase II transcription regulatory region sequence-specific DNA binding IEP Predict GO terms from Neighborhoods
BP GO:0001101 response to acid chemical IEP Predict GO terms from Neighborhoods
BP GO:0001539 cilium or flagellum-dependent cell motility IEP Predict GO terms from Neighborhoods
BP GO:0003002 regionalization IEP Predict GO terms from Neighborhoods
BP GO:0003341 cilium movement IEP Predict GO terms from Neighborhoods
MF GO:0003680 minor groove of adenine-thymine-rich DNA binding IEP Predict GO terms from Neighborhoods
MF GO:0005319 lipid transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0005342 organic acid transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0005451 monovalent cation:proton antiporter activity IEP Predict GO terms from Neighborhoods
CC GO:0005667 transcription regulator complex IEP Predict GO terms from Neighborhoods
CC GO:0005694 chromosome IEP Predict GO terms from Neighborhoods
CC GO:0005700 polytene chromosome IEP Predict GO terms from Neighborhoods
BP GO:0006139 nucleobase-containing compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006277 DNA amplification IEP Predict GO terms from Neighborhoods
BP GO:0006807 nitrogen compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006857 oligopeptide transport IEP Predict GO terms from Neighborhoods
BP GO:0006869 lipid transport IEP Predict GO terms from Neighborhoods
BP GO:0006972 hyperosmotic response IEP Predict GO terms from Neighborhoods
BP GO:0007018 microtubule-based movement IEP Predict GO terms from Neighborhoods
BP GO:0007307 eggshell chorion gene amplification IEP Predict GO terms from Neighborhoods
BP GO:0007389 pattern specification process IEP Predict GO terms from Neighborhoods
MF GO:0008028 monocarboxylic acid transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0008340 determination of adult lifespan IEP Predict GO terms from Neighborhoods
MF GO:0008509 anion transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0008514 organic anion transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0009414 response to water deprivation IEP Predict GO terms from Neighborhoods
BP GO:0009415 response to water IEP Predict GO terms from Neighborhoods
BP GO:0009648 photoperiodism IEP Predict GO terms from Neighborhoods
BP GO:0009653 anatomical structure morphogenesis IEP Predict GO terms from Neighborhoods
CC GO:0009705 plant-type vacuole membrane IEP Predict GO terms from Neighborhoods
BP GO:0009725 response to hormone IEP Predict GO terms from Neighborhoods
BP GO:0009737 response to abscisic acid IEP Predict GO terms from Neighborhoods
BP GO:0009860 pollen tube growth IEP Predict GO terms from Neighborhoods
BP GO:0009914 hormone transport IEP Predict GO terms from Neighborhoods
BP GO:0009926 auxin polar transport IEP Predict GO terms from Neighborhoods
BP GO:0009934 regulation of meristem structural organization IEP Predict GO terms from Neighborhoods
BP GO:0010035 response to inorganic substance IEP Predict GO terms from Neighborhoods
BP GO:0010051 xylem and phloem pattern formation IEP Predict GO terms from Neighborhoods
BP GO:0010167 response to nitrate IEP Predict GO terms from Neighborhoods
BP GO:0010235 guard mother cell cytokinesis IEP Predict GO terms from Neighborhoods
BP GO:0010336 gibberellic acid homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0010375 stomatal complex patterning IEP Predict GO terms from Neighborhoods
BP GO:0010540 basipetal auxin transport IEP Predict GO terms from Neighborhoods
MF GO:0015078 proton transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015079 potassium ion transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015112 nitrate transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015291 secondary active transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015293 symporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015297 antiporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015298 solute:cation antiporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015299 solute:proton antiporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015334 high-affinity oligopeptide transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015386 potassium:proton antiporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015665 alcohol transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0015698 inorganic anion transport IEP Predict GO terms from Neighborhoods
BP GO:0015706 nitrate transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0015711 organic anion transport IEP Predict GO terms from Neighborhoods
BP GO:0015718 monocarboxylic acid transport IEP Predict GO terms from Neighborhoods
BP GO:0015833 peptide transport IEP Predict GO terms from Neighborhoods
BP GO:0015849 organic acid transport IEP Predict GO terms from Neighborhoods
BP GO:0015850 organic hydroxy compound transport IEP Predict GO terms from Neighborhoods
BP GO:0016556 mRNA modification IEP Predict GO terms from Neighborhoods
CC GO:0017053 transcription repressor complex IEP Predict GO terms from Neighborhoods
MF GO:0022821 solute:potassium antiporter activity IEP Predict GO terms from Neighborhoods
MF GO:0022853 active ion transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0030317 flagellated sperm motility IEP Predict GO terms from Neighborhoods
CC GO:0030849 autosome IEP Predict GO terms from Neighborhoods
BP GO:0031425 chloroplast RNA processing IEP Predict GO terms from Neighborhoods
CC GO:0031523 Myb complex IEP Predict GO terms from Neighborhoods
BP GO:0033993 response to lipid IEP Predict GO terms from Neighborhoods
MF GO:0035673 oligopeptide transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0042126 nitrate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0042128 nitrate assimilation IEP Predict GO terms from Neighborhoods
BP GO:0042538 hyperosmotic salinity response IEP Predict GO terms from Neighborhoods
BP GO:0042886 amide transport IEP Predict GO terms from Neighborhoods
MF GO:0042887 amide transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0042937 tripeptide transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0042938 dipeptide transport IEP Predict GO terms from Neighborhoods
BP GO:0042939 tripeptide transport IEP Predict GO terms from Neighborhoods
BP GO:0043200 response to amino acid IEP Predict GO terms from Neighborhoods
BP GO:0043201 response to leucine IEP Predict GO terms from Neighborhoods
BP GO:0046864 isoprenoid transport IEP Predict GO terms from Neighborhoods
BP GO:0046865 terpenoid transport IEP Predict GO terms from Neighborhoods
MF GO:0046873 metal ion transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0046942 carboxylic acid transport IEP Predict GO terms from Neighborhoods
MF GO:0046943 carboxylic acid transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0048366 leaf development IEP Predict GO terms from Neighborhoods
BP GO:0048444 floral organ morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0048527 lateral root development IEP Predict GO terms from Neighborhoods
BP GO:0048528 post-embryonic root development IEP Predict GO terms from Neighborhoods
BP GO:0048573 photoperiodism, flowering IEP Predict GO terms from Neighborhoods
BP GO:0048870 cell motility IEP Predict GO terms from Neighborhoods
MF GO:0051139 metal cation:proton antiporter activity IEP Predict GO terms from Neighborhoods
BP GO:0051302 regulation of cell division IEP Predict GO terms from Neighborhoods
BP GO:0055067 monovalent inorganic cation homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0055075 potassium ion homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0055088 lipid homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0060285 cilium-dependent cell motility IEP Predict GO terms from Neighborhoods
BP GO:0060294 cilium movement involved in cell motility IEP Predict GO terms from Neighborhoods
BP GO:0060918 auxin transport IEP Predict GO terms from Neighborhoods
CC GO:0070176 DRM complex IEP Predict GO terms from Neighborhoods
BP GO:0071897 DNA biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0071916 dipeptide transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0071941 nitrogen cycle metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0080052 response to histidine IEP Predict GO terms from Neighborhoods
BP GO:0080053 response to phenylalanine IEP Predict GO terms from Neighborhoods
MF GO:0080054 low-affinity nitrate transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0080156 mitochondrial mRNA modification IEP Predict GO terms from Neighborhoods
BP GO:0080168 abscisic acid transport IEP Predict GO terms from Neighborhoods
BP GO:0090304 nucleic acid metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0090440 abscisic acid transmembrane transporter activity IEP Predict GO terms from Neighborhoods
CC GO:0090571 RNA polymerase II transcription repressor complex IEP Predict GO terms from Neighborhoods
BP GO:0090696 post-embryonic plant organ development IEP Predict GO terms from Neighborhoods
BP GO:0090697 post-embryonic plant organ morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0097305 response to alcohol IEP Predict GO terms from Neighborhoods
BP GO:0097722 sperm motility IEP Predict GO terms from Neighborhoods
BP GO:0098655 cation transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0098656 anion transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0098661 inorganic anion transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0098662 inorganic cation transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0099402 plant organ development IEP Predict GO terms from Neighborhoods
MF GO:0140828 metal cation:monoatomic cation antiporter activity IEP Predict GO terms from Neighborhoods
BP GO:1900864 mitochondrial RNA modification IEP Predict GO terms from Neighborhoods
MF GO:1901618 organic hydroxy compound transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:1902025 nitrate import IEP Predict GO terms from Neighborhoods
BP GO:1902600 proton transmembrane transport IEP Predict GO terms from Neighborhoods
MF GO:1904680 peptide transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:2001057 reactive nitrogen species metabolic process IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR012474 Frigida 166 449
No external refs found!