Coexpression cluster: Cluster_45 (HCCA Clusters (HRR 50 & PCC 0.5))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0004493 methylmalonyl-CoA epimerase activity 3.23% (2/62) 9.3 2e-06 0.001496
GO:0046491 L-methylmalonyl-CoA metabolic process 3.23% (2/62) 9.3 2e-06 0.001496
GO:0004512 inositol-3-phosphate synthase activity 3.23% (2/62) 8.72 7e-06 0.00299
GO:0006021 inositol biosynthetic process 3.23% (2/62) 7.3 6.9e-05 0.00694
GO:0015446 ATPase-coupled arsenite transmembrane transporter activity 3.23% (2/62) 7.3 6.9e-05 0.00694
GO:0044604 ABC-type phytochelatin transporter activity 3.23% (2/62) 7.3 6.9e-05 0.00694
GO:1902417 (+)-abscisic acid D-glucopyranosyl ester transmembrane transporter activity 3.23% (2/62) 7.3 6.9e-05 0.00694
GO:1902418 (+)-abscisic acid D-glucopyranosyl ester transmembrane transport 3.23% (2/62) 7.3 6.9e-05 0.00694
GO:0006659 phosphatidylserine biosynthetic process 3.23% (2/62) 7.72 3.7e-05 0.007451
GO:0030849 autosome 3.23% (2/62) 7.72 3.7e-05 0.007451
GO:0050787 detoxification of mercury ion 3.23% (2/62) 7.72 3.7e-05 0.007451
GO:0042823 pyridoxal phosphate biosynthetic process 3.23% (2/62) 7.13 8.8e-05 0.007641
GO:0004462 lactoylglutathione lyase activity 3.23% (2/62) 7.13 8.8e-05 0.007641
GO:0042819 vitamin B6 biosynthetic process 3.23% (2/62) 6.98 0.00011 0.007857
GO:0006658 phosphatidylserine metabolic process 3.23% (2/62) 6.98 0.00011 0.007857
GO:0019243 methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione 3.23% (2/62) 6.98 0.00011 0.007857
GO:0042946 glucoside transport 3.23% (2/62) 6.84 0.000135 0.008584
GO:0042947 glucoside transmembrane transporter activity 3.23% (2/62) 6.84 0.000135 0.008584
GO:0042822 pyridoxal phosphate metabolic process 3.23% (2/62) 6.72 0.000162 0.008887
GO:0061727 methylglyoxal catabolic process to lactate 3.23% (2/62) 6.72 0.000162 0.008887
GO:0015440 ABC-type peptide transporter activity 3.23% (2/62) 6.72 0.000162 0.008887
GO:0070176 DRM complex 3.23% (2/62) 7.49 5.2e-05 0.008932
GO:0042816 vitamin B6 metabolic process 3.23% (2/62) 6.6 0.000191 0.009233
GO:0051596 methylglyoxal catabolic process 3.23% (2/62) 6.6 0.000191 0.009233
GO:0015723 bilirubin transport 3.23% (2/62) 6.6 0.000191 0.009233
GO:0010264 myo-inositol hexakisphosphate biosynthetic process 3.23% (2/62) 6.39 0.000256 0.010336
GO:0033517 myo-inositol hexakisphosphate metabolic process 3.23% (2/62) 6.39 0.000256 0.010336
GO:0007307 eggshell chorion gene amplification 3.23% (2/62) 6.39 0.000256 0.010336
GO:0010235 guard mother cell cytokinesis 3.23% (2/62) 6.39 0.000256 0.010336
GO:0010375 stomatal complex patterning 3.23% (2/62) 6.39 0.000256 0.010336
GO:0006277 DNA amplification 3.23% (2/62) 6.3 0.000293 0.011063
GO:0016853 isomerase activity 8.06% (5/62) 3.11 0.000293 0.011409
GO:0006089 lactate metabolic process 3.23% (2/62) 6.21 0.000332 0.012146
GO:0016872 intramolecular lyase activity 3.23% (2/62) 6.13 0.000373 0.012175
GO:0032958 inositol phosphate biosynthetic process 3.23% (2/62) 6.13 0.000373 0.012175
GO:0006855 xenobiotic transmembrane transport 3.23% (2/62) 6.13 0.000373 0.012175
GO:0006081 cellular aldehyde metabolic process 6.45% (4/62) 3.59 0.000354 0.012583
GO:0006575 cellular modified amino acid metabolic process 6.45% (4/62) 3.48 0.000467 0.014108
GO:0090571 RNA polymerase II transcription repressor complex 3.23% (2/62) 5.98 0.000462 0.014314
GO:0016999 antibiotic metabolic process 3.23% (2/62) 5.98 0.000462 0.014314
GO:0046685 response to arsenic-containing substance 4.84% (3/62) 4.3 0.000489 0.014413
GO:1901683 arsenate ion transmembrane transporter activity 3.23% (2/62) 5.91 0.00051 0.014676
GO:0015700 arsenite transport 3.23% (2/62) 5.84 0.00056 0.015752
GO:0098754 detoxification 8.06% (5/62) 2.87 0.000615 0.016897
GO:0008281 sulfonylurea receptor activity 3.23% (2/62) 5.72 0.000668 0.017183
GO:0010290 chlorophyll catabolite transmembrane transporter activity 3.23% (2/62) 5.72 0.000668 0.017183
GO:0071715 icosanoid transport 3.23% (2/62) 5.72 0.000668 0.017183
GO:0030317 flagellated sperm motility 3.23% (2/62) 5.49 0.000911 0.019326
GO:0060285 cilium-dependent cell motility 3.23% (2/62) 5.49 0.000911 0.019326
GO:0060294 cilium movement involved in cell motility 3.23% (2/62) 5.49 0.000911 0.019326
GO:0097722 sperm motility 3.23% (2/62) 5.49 0.000911 0.019326
GO:0071897 DNA biosynthetic process 4.84% (3/62) 4.03 0.000848 0.019338
GO:0009438 methylglyoxal metabolic process 3.23% (2/62) 5.55 0.000847 0.019691
GO:0015431 ABC-type glutathione S-conjugate transporter activity 3.23% (2/62) 5.55 0.000847 0.019691
GO:0015721 bile acid and bile salt transport 3.23% (2/62) 5.55 0.000847 0.019691
GO:0006020 inositol metabolic process 3.23% (2/62) 5.6 0.000785 0.019772
GO:0000910 cytokinesis 6.45% (4/62) 3.26 0.000823 0.020296
GO:0001539 cilium or flagellum-dependent cell motility 3.23% (2/62) 5.39 0.001046 0.021443
GO:1901656 glycoside transport 3.23% (2/62) 5.39 0.001046 0.021443
GO:0031523 Myb complex 3.23% (2/62) 5.35 0.001117 0.022516
GO:1904680 peptide transmembrane transporter activity 4.84% (3/62) 3.85 0.001204 0.023866
GO:0015698 inorganic anion transport 6.45% (4/62) 3.11 0.001226 0.023907
GO:0043647 inositol phosphate metabolic process 3.23% (2/62) 5.17 0.001424 0.027327
GO:1901965 endoplasmic reticulum to chloroplast transport 1.61% (1/62) 9.3 0.001586 0.027395
GO:1990052 ER to chloroplast lipid transport 1.61% (1/62) 9.3 0.001586 0.027395
GO:0031958 corticosteroid receptor signaling pathway 1.61% (1/62) 9.3 0.001586 0.027395
GO:0042921 glucocorticoid receptor signaling pathway 1.61% (1/62) 9.3 0.001586 0.027395
GO:0060430 lung saccule development 1.61% (1/62) 9.3 0.001586 0.027395
GO:0006982 response to lipid hydroperoxide 1.61% (1/62) 9.3 0.001586 0.027395
GO:0010335 response to non-ionic osmotic stress 1.61% (1/62) 9.3 0.001586 0.027395
GO:0031589 cell-substrate adhesion 3.23% (2/62) 4.98 0.001857 0.031626
GO:0072525 pyridine-containing compound biosynthetic process 3.23% (2/62) 4.91 0.002046 0.033427
GO:0003341 cilium movement 3.23% (2/62) 4.91 0.002046 0.033427
GO:0015718 monocarboxylic acid transport 4.84% (3/62) 3.59 0.002021 0.033934
GO:0055075 potassium ion homeostasis 4.84% (3/62) 3.55 0.002171 0.03453
GO:1901527 abscisic acid-activated signaling pathway involved in stomatal movement 3.23% (2/62) 4.87 0.002144 0.034555
GO:0061687 detoxification of inorganic compound 3.23% (2/62) 4.84 0.002243 0.035224
GO:0015216 purine nucleotide transmembrane transporter activity 3.23% (2/62) 4.78 0.002449 0.037966
GO:0055067 monovalent inorganic cation homeostasis 6.45% (4/62) 2.82 0.002541 0.038885
GO:0042398 cellular modified amino acid biosynthetic process 3.23% (2/62) 4.72 0.002664 0.039764
GO:0015215 nucleotide transmembrane transporter activity 3.23% (2/62) 4.72 0.002664 0.039764
GO:0046185 aldehyde catabolic process 3.23% (2/62) 4.69 0.002775 0.040416
GO:0006970 response to osmotic stress 16.13% (10/62) 1.48 0.002765 0.040765
GO:1903725 regulation of phospholipid metabolic process 3.23% (2/62) 4.66 0.002887 0.041557
GO:0043678 intine 1.61% (1/62) 8.3 0.00317 0.04306
GO:0042817 pyridoxal metabolic process 1.61% (1/62) 8.3 0.00317 0.04306
GO:0042821 pyridoxal biosynthetic process 1.61% (1/62) 8.3 0.00317 0.04306
GO:0050220 prostaglandin-E synthase activity 1.61% (1/62) 8.3 0.00317 0.04306
GO:0150104 transport across blood-brain barrier 3.23% (2/62) 4.57 0.003238 0.043497
GO:0006875 cellular metal ion homeostasis 6.45% (4/62) 2.74 0.003058 0.043502
GO:0055065 metal ion homeostasis 8.06% (5/62) 2.31 0.003408 0.045284
GO:0006869 lipid transport 6.45% (4/62) 2.69 0.003515 0.045692
GO:0003680 minor groove of adenine-thymine-rich DNA binding 3.23% (2/62) 4.52 0.003482 0.045763
GO:0034637 cellular carbohydrate biosynthetic process 6.45% (4/62) 2.65 0.003877 0.049871
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_70 0.008 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_77 0.01 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_170 0.011 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_210 0.007 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_15 0.007 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_23 0.009 Orthogroups with 8 Potato genotypes Compare
Sequences (62) (download table)

InterPro Domains

GO Terms

Family Terms