SOLTUB.AGRIA.G00000013566


Description : F-box/LRR-repeat protein 4


Gene families : OG_02_0008816 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000013566
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_56


Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEA AHRD
MF GO:0005515 protein binding IEA AHRD
CC GO:0005634 nucleus IEA AHRD
CC GO:0005856 cytoskeleton IEA AHRD
BP GO:0007049 cell cycle IEA AHRD
BP GO:0009894 regulation of catabolic process IEA AHRD
BP GO:0010286 heat acclimation IEA AHRD
BP GO:0010311 lateral root formation IEA AHRD
BP GO:0016567 protein ubiquitination IEA AHRD
CC GO:0019005 SCF ubiquitin ligase complex IEA AHRD
BP GO:0031146 SCF-dependent proteasomal ubiquitin-dependent protein catabolic process IEA AHRD
CC GO:0045202 synapse IEA AHRD
BP GO:0050804 modulation of chemical synaptic transmission IEA AHRD
BP GO:0051046 regulation of secretion IEA AHRD
BP GO:0051781 positive regulation of cell division IEA AHRD
BP GO:0071365 cellular response to auxin stimulus IEA AHRD
CC GO:0120025 plasma membrane bounded cell projection IEA AHRD
BP GO:1901332 negative regulation of lateral root development IEA AHRD
Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP Predict GO terms from Neighborhoods
BP GO:0000075 cell cycle checkpoint signaling IEP Predict GO terms from Neighborhoods
CC GO:0000159 protein phosphatase type 2A complex IEP Predict GO terms from Neighborhoods
BP GO:0000280 nuclear division IEP Predict GO terms from Neighborhoods
CC GO:0000775 chromosome, centromeric region IEP Predict GO terms from Neighborhoods
MF GO:0000993 RNA polymerase II complex binding IEP Predict GO terms from Neighborhoods
MF GO:0001098 basal transcription machinery binding IEP Predict GO terms from Neighborhoods
MF GO:0001099 basal RNA polymerase II transcription machinery binding IEP Predict GO terms from Neighborhoods
BP GO:0001889 liver development IEP Predict GO terms from Neighborhoods
BP GO:0001933 negative regulation of protein phosphorylation IEP Predict GO terms from Neighborhoods
MF GO:0003823 antigen binding IEP Predict GO terms from Neighborhoods
MF GO:0004419 hydroxymethylglutaryl-CoA lyase activity IEP Predict GO terms from Neighborhoods
MF GO:0004722 protein serine/threonine phosphatase activity IEP Predict GO terms from Neighborhoods
MF GO:0004930 G protein-coupled receptor activity IEP Predict GO terms from Neighborhoods
MF GO:0005198 structural molecule activity IEP Predict GO terms from Neighborhoods
CC GO:0005782 peroxisomal matrix IEP Predict GO terms from Neighborhoods
CC GO:0005814 centriole IEP Predict GO terms from Neighborhoods
CC GO:0005816 spindle pole body IEP Predict GO terms from Neighborhoods
CC GO:0005934 cellular bud tip IEP Predict GO terms from Neighborhoods
CC GO:0005935 cellular bud neck IEP Predict GO terms from Neighborhoods
BP GO:0006275 regulation of DNA replication IEP Predict GO terms from Neighborhoods
BP GO:0006551 leucine metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006552 leucine catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006637 acyl-CoA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006643 membrane lipid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006665 sphingolipid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006672 ceramide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006915 apoptotic process IEP Predict GO terms from Neighborhoods
BP GO:0007062 sister chromatid cohesion IEP Predict GO terms from Neighborhoods
BP GO:0007088 regulation of mitotic nuclear division IEP Predict GO terms from Neighborhoods
BP GO:0007093 mitotic cell cycle checkpoint signaling IEP Predict GO terms from Neighborhoods
BP GO:0007094 mitotic spindle assembly checkpoint signaling IEP Predict GO terms from Neighborhoods
BP GO:0007099 centriole replication IEP Predict GO terms from Neighborhoods
BP GO:0007143 female meiotic nuclear division IEP Predict GO terms from Neighborhoods
BP GO:0007186 G protein-coupled receptor signaling pathway IEP Predict GO terms from Neighborhoods
CC GO:0008023 transcription elongation factor complex IEP Predict GO terms from Neighborhoods
MF GO:0008170 N-methyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0008276 protein methyltransferase activity IEP Predict GO terms from Neighborhoods
CC GO:0008287 protein serine/threonine phosphatase complex IEP Predict GO terms from Neighborhoods
BP GO:0008300 isoprenoid catabolic process IEP Predict GO terms from Neighborhoods
MF GO:0008502 melatonin receptor activity IEP Predict GO terms from Neighborhoods
BP GO:0008589 regulation of smoothened signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0009081 branched-chain amino acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009083 branched-chain amino acid catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009436 glyoxylate catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009910 negative regulation of flower development IEP Predict GO terms from Neighborhoods
BP GO:0010965 regulation of mitotic sister chromatid separation IEP Predict GO terms from Neighborhoods
BP GO:0015977 carbon fixation IEP Predict GO terms from Neighborhoods
MF GO:0016278 lysine N-methyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Predict GO terms from Neighborhoods
CC GO:0016593 Cdc73/Paf1 complex IEP Predict GO terms from Neighborhoods
MF GO:0016833 oxo-acid-lyase activity IEP Predict GO terms from Neighborhoods
MF GO:0017018 myosin phosphatase activity IEP Predict GO terms from Neighborhoods
MF GO:0017151 DEAD/H-box RNA helicase binding IEP Predict GO terms from Neighborhoods
BP GO:0018022 peptidyl-lysine methylation IEP Predict GO terms from Neighborhoods
MF GO:0019208 phosphatase regulator activity IEP Predict GO terms from Neighborhoods
BP GO:0019236 response to pheromone IEP Predict GO terms from Neighborhoods
MF GO:0019888 protein phosphatase regulator activity IEP Predict GO terms from Neighborhoods
BP GO:0030036 actin cytoskeleton organization IEP Predict GO terms from Neighborhoods
BP GO:0030071 regulation of mitotic metaphase/anaphase transition IEP Predict GO terms from Neighborhoods
MF GO:0030145 manganese ion binding IEP Predict GO terms from Neighborhoods
BP GO:0030155 regulation of cell adhesion IEP Predict GO terms from Neighborhoods
BP GO:0031023 microtubule organizing center organization IEP Predict GO terms from Neighborhoods
BP GO:0031033 myosin filament organization IEP Predict GO terms from Neighborhoods
BP GO:0031034 myosin filament assembly IEP Predict GO terms from Neighborhoods
MF GO:0031406 carboxylic acid binding IEP Predict GO terms from Neighborhoods
BP GO:0031577 spindle checkpoint signaling IEP Predict GO terms from Neighborhoods
CC GO:0031907 microbody lumen IEP Predict GO terms from Neighborhoods
BP GO:0033045 regulation of sister chromatid segregation IEP Predict GO terms from Neighborhoods
BP GO:0033046 negative regulation of sister chromatid segregation IEP Predict GO terms from Neighborhoods
BP GO:0033047 regulation of mitotic sister chromatid segregation IEP Predict GO terms from Neighborhoods
BP GO:0033048 negative regulation of mitotic sister chromatid segregation IEP Predict GO terms from Neighborhoods
MF GO:0033218 amide binding IEP Predict GO terms from Neighborhoods
BP GO:0035303 regulation of dephosphorylation IEP Predict GO terms from Neighborhoods
BP GO:0035304 regulation of protein dephosphorylation IEP Predict GO terms from Neighborhoods
BP GO:0035330 regulation of hippo signaling IEP Predict GO terms from Neighborhoods
BP GO:0035331 negative regulation of hippo signaling IEP Predict GO terms from Neighborhoods
BP GO:0035383 thioester metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0042326 negative regulation of phosphorylation IEP Predict GO terms from Neighborhoods
BP GO:0042509 regulation of tyrosine phosphorylation of STAT protein IEP Predict GO terms from Neighborhoods
BP GO:0042532 negative regulation of tyrosine phosphorylation of STAT protein IEP Predict GO terms from Neighborhoods
MF GO:0043175 RNA polymerase core enzyme binding IEP Predict GO terms from Neighborhoods
CC GO:0043186 P granule IEP Predict GO terms from Neighborhoods
CC GO:0043332 mating projection tip IEP Predict GO terms from Neighborhoods
BP GO:0043427 carbon fixation by 3-hydroxypropionate cycle IEP Predict GO terms from Neighborhoods
BP GO:0043603 cellular amide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0044380 protein localization to cytoskeleton IEP Predict GO terms from Neighborhoods
CC GO:0045121 membrane raft IEP Predict GO terms from Neighborhoods
MF GO:0045309 protein phosphorylated amino acid binding IEP Predict GO terms from Neighborhoods
BP GO:0045839 negative regulation of mitotic nuclear division IEP Predict GO terms from Neighborhoods
BP GO:0045841 negative regulation of mitotic metaphase/anaphase transition IEP Predict GO terms from Neighborhoods
BP GO:0045879 negative regulation of smoothened signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0046185 aldehyde catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046247 terpene catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046425 regulation of receptor signaling pathway via JAK-STAT IEP Predict GO terms from Neighborhoods
BP GO:0046426 negative regulation of receptor signaling pathway via JAK-STAT IEP Predict GO terms from Neighborhoods
BP GO:0046487 glyoxylate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046626 regulation of insulin receptor signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0046627 negative regulation of insulin receptor signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0046950 cellular ketone body metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046951 ketone body biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0050730 regulation of peptidyl-tyrosine phosphorylation IEP Predict GO terms from Neighborhoods
BP GO:0050732 negative regulation of peptidyl-tyrosine phosphorylation IEP Predict GO terms from Neighborhoods
MF GO:0050815 phosphoserine residue binding IEP Predict GO terms from Neighborhoods
BP GO:0051177 meiotic sister chromatid cohesion IEP Predict GO terms from Neighborhoods
MF GO:0051219 phosphoprotein binding IEP Predict GO terms from Neighborhoods
BP GO:0051225 spindle assembly IEP Predict GO terms from Neighborhoods
BP GO:0051231 spindle elongation IEP Predict GO terms from Neighborhoods
BP GO:0051232 meiotic spindle elongation IEP Predict GO terms from Neighborhoods
BP GO:0051754 meiotic sister chromatid cohesion, centromeric IEP Predict GO terms from Neighborhoods
BP GO:0051784 negative regulation of nuclear division IEP Predict GO terms from Neighborhoods
BP GO:0051983 regulation of chromosome segregation IEP Predict GO terms from Neighborhoods
BP GO:0051985 negative regulation of chromosome segregation IEP Predict GO terms from Neighborhoods
BP GO:0060561 apoptotic process involved in morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0061492 asymmetric protein localization to old or new spindle pole body IEP Predict GO terms from Neighborhoods
BP GO:0061509 asymmetric protein localization to old mitotic spindle pole body IEP Predict GO terms from Neighborhoods
MF GO:0070063 RNA polymerase binding IEP Predict GO terms from Neighborhoods
BP GO:0070192 chromosome organization involved in meiotic cell cycle IEP Predict GO terms from Neighborhoods
BP GO:0070262 peptidyl-serine dephosphorylation IEP Predict GO terms from Neighborhoods
BP GO:0070601 centromeric sister chromatid cohesion IEP Predict GO terms from Neighborhoods
BP GO:0071173 spindle assembly checkpoint signaling IEP Predict GO terms from Neighborhoods
BP GO:0071174 mitotic spindle checkpoint signaling IEP Predict GO terms from Neighborhoods
BP GO:0071988 protein localization to spindle pole body IEP Predict GO terms from Neighborhoods
CC GO:0072686 mitotic spindle IEP Predict GO terms from Neighborhoods
BP GO:0072698 protein localization to microtubule cytoskeleton IEP Predict GO terms from Neighborhoods
CC GO:0090443 FAR/SIN/STRIPAK complex IEP Predict GO terms from Neighborhoods
BP GO:0098534 centriole assembly IEP Predict GO terms from Neighborhoods
CC GO:0098857 membrane microdomain IEP Predict GO terms from Neighborhoods
MF GO:0099122 RNA polymerase II C-terminal domain binding IEP Predict GO terms from Neighborhoods
MF GO:0120227 acyl-CoA binding IEP Predict GO terms from Neighborhoods
BP GO:0120253 hydrocarbon catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0140013 meiotic nuclear division IEP Predict GO terms from Neighborhoods
BP GO:1900076 regulation of cellular response to insulin stimulus IEP Predict GO terms from Neighborhoods
BP GO:1900077 negative regulation of cellular response to insulin stimulus IEP Predict GO terms from Neighborhoods
MF GO:1901567 fatty acid derivative binding IEP Predict GO terms from Neighborhoods
BP GO:1901570 fatty acid derivative biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1901606 alpha-amino acid catabolic process IEP Predict GO terms from Neighborhoods
MF GO:1901681 sulfur compound binding IEP Predict GO terms from Neighborhoods
BP GO:1901991 negative regulation of mitotic cell cycle phase transition IEP Predict GO terms from Neighborhoods
BP GO:1902099 regulation of metaphase/anaphase transition of cell cycle IEP Predict GO terms from Neighborhoods
BP GO:1902100 negative regulation of metaphase/anaphase transition of cell cycle IEP Predict GO terms from Neighborhoods
BP GO:1902224 ketone body metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1902440 protein localization to mitotic spindle pole body IEP Predict GO terms from Neighborhoods
BP GO:1902742 apoptotic process involved in development IEP Predict GO terms from Neighborhoods
CC GO:1903293 phosphatase complex IEP Predict GO terms from Neighborhoods
BP GO:1903538 regulation of meiotic cell cycle process involved in oocyte maturation IEP Predict GO terms from Neighborhoods
MF GO:1904408 melatonin binding IEP Predict GO terms from Neighborhoods
BP GO:1904892 regulation of receptor signaling pathway via STAT IEP Predict GO terms from Neighborhoods
BP GO:1904893 negative regulation of receptor signaling pathway via STAT IEP Predict GO terms from Neighborhoods
BP GO:1905508 protein localization to microtubule organizing center IEP Predict GO terms from Neighborhoods
CC GO:1905742 Ras guanyl-nucleotide exchange factor complex IEP Predict GO terms from Neighborhoods
BP GO:1905818 regulation of chromosome separation IEP Predict GO terms from Neighborhoods
BP GO:1905819 negative regulation of chromosome separation IEP Predict GO terms from Neighborhoods
MF GO:1990269 RNA polymerase II C-terminal domain phosphoserine binding IEP Predict GO terms from Neighborhoods
MF GO:1990405 protein antigen binding IEP Predict GO terms from Neighborhoods
BP GO:2000816 negative regulation of mitotic sister chromatid separation IEP Predict GO terms from Neighborhoods
BP GO:2001233 regulation of apoptotic signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:2001235 positive regulation of apoptotic signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:2001236 regulation of extrinsic apoptotic signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:2001238 positive regulation of extrinsic apoptotic signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:2001239 regulation of extrinsic apoptotic signaling pathway in absence of ligand IEP Predict GO terms from Neighborhoods
BP GO:2001241 positive regulation of extrinsic apoptotic signaling pathway in absence of ligand IEP Predict GO terms from Neighborhoods
BP GO:2001251 negative regulation of chromosome organization IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 111 131
IPR001611 Leu-rich_rpt 136 158
IPR001611 Leu-rich_rpt 373 393
IPR001611 Leu-rich_rpt 187 209
IPR001611 Leu-rich_rpt 213 234
No external refs found!