SOLTUB.AGRIA.G00000013605

Description : Disease resistance protein RPP13

Gene families : OG_02_0000007 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000013605
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_104

Type	GO Term	Name	Evidence	Source
BP	GO:0002376	immune system process	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	IEA	AHRD
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005737	cytoplasm	IEA	AHRD
CC	GO:0005886	plasma membrane	IEA	AHRD
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006952	defense response	None	Extended
BP	GO:0006955	immune response	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008219	cell death	None	Extended
BP	GO:0009314	response to radiation	None	Extended
BP	GO:0009416	response to light stimulus	IEA	AHRD
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009607	response to biotic stimulus	None	Extended
BP	GO:0009620	response to fungus	IEA	AHRD
BP	GO:0009626	plant-type hypersensitive response	IEA	AHRD
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009751	response to salicylic acid	IEA	AHRD
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0012501	programmed cell death	None	Extended
BP	GO:0014070	response to organic cyclic compound	None	Extended
CC	GO:0016020	membrane	None	Extended
BP	GO:0033554	cellular response to stress	None	Extended
BP	GO:0034050	programmed cell death induced by symbiont	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0043207	response to external biotic stimulus	None	Extended
BP	GO:0044403	biological process involved in symbiotic interaction	None	Extended
BP	GO:0044419	biological process involved in interspecies interaction between organisms	None	Extended
BP	GO:0045087	innate immune response	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051702	biological process involved in interaction with symbiont	None	Extended
BP	GO:0051707	response to other organism	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0098542	defense response to other organism	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000302	response to reactive oxygen species	IEP	Predict GO terms from Neighborhoods
BP	GO:0002833	positive regulation of response to biotic stimulus	IEP	Predict GO terms from Neighborhoods
MF	GO:0003953	NAD+ nucleosidase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0005227	calcium activated cation channel activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0005262	calcium channel activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0006482	protein demethylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0006970	response to osmotic stress	IEP	Predict GO terms from Neighborhoods
BP	GO:0006986	response to unfolded protein	IEP	Predict GO terms from Neighborhoods
BP	GO:0008214	protein dealkylation	IEP	Predict GO terms from Neighborhoods
MF	GO:0008381	mechanosensitive ion channel activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0009819	drought recovery	IEP	Predict GO terms from Neighborhoods
BP	GO:0010087	phloem or xylem histogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0010088	phloem development	IEP	Predict GO terms from Neighborhoods
BP	GO:0010267	ta-siRNA processing	IEP	Predict GO terms from Neighborhoods
MF	GO:0015085	calcium ion transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0016577	histone demethylation	IEP	Predict GO terms from Neighborhoods
MF	GO:0022836	gated channel activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0022839	ion gated channel activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0030422	siRNA processing	IEP	Predict GO terms from Neighborhoods
BP	GO:0031349	positive regulation of defense response	IEP	Predict GO terms from Neighborhoods
BP	GO:0031930	mitochondria-nucleus signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0032103	positive regulation of response to external stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0034614	cellular response to reactive oxygen species	IEP	Predict GO terms from Neighborhoods
BP	GO:0034720	histone H3-K4 demethylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0035966	response to topologically incorrect protein	IEP	Predict GO terms from Neighborhoods
MF	GO:0042803	protein homodimerization activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0046983	protein dimerization activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0048759	xylem vessel member cell differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0048829	root cap development	IEP	Predict GO terms from Neighborhoods
BP	GO:0060966	regulation of gene silencing by RNA	IEP	Predict GO terms from Neighborhoods
BP	GO:0062197	cellular response to chemical stress	IEP	Predict GO terms from Neighborhoods
BP	GO:0070076	histone lysine demethylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0070301	cellular response to hydrogen peroxide	IEP	Predict GO terms from Neighborhoods
BP	GO:0070588	calcium ion transmembrane transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0070988	demethylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0071214	cellular response to abiotic stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0071470	cellular response to osmotic stress	IEP	Predict GO terms from Neighborhoods
BP	GO:0071474	cellular hyperosmotic response	IEP	Predict GO terms from Neighborhoods
BP	GO:0090059	protoxylem development	IEP	Predict GO terms from Neighborhoods
BP	GO:0090279	regulation of calcium ion import	IEP	Predict GO terms from Neighborhoods
BP	GO:0090601	enucleation	IEP	Predict GO terms from Neighborhoods
BP	GO:0090602	sieve element enucleation	IEP	Predict GO terms from Neighborhoods
BP	GO:0104004	cellular response to environmental stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:1901348	positive regulation of secondary cell wall biogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:1903340	positive regulation of cell wall organization or biogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:1905177	tracheary element differentiation	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR002182	NB-ARC	168	419
IPR041118	Rx_N	5	88
IPR027417	P-loop_NTPase	157	423

External Links

No external refs found!

SOLTUB.AGRIA.G00000013605

Expression Profile

Co-expression Networks

Functional Annotation