SOLTUB.AGRIA.G00000013678

Description : Disease resistance protein (CC-NBS-LRR class) family

Gene families : OG_02_0001568 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000013678
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_12

Target	Alias	Description	ECC score	Gene Family Method
SOLTUB.AGRIA.G00000013579	No alias	Disease resistance protein (CC-NBS-LRR class) family	0.11	Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000013579	No alias	Disease resistance protein (CC-NBS-LRR class) family	0.11	Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000013579	No alias	Disease resistance protein (CC-NBS-LRR class) family	0.11	Orthogroups with 8 Potato genotypes

Type	GO Term	Name	Evidence	Source
BP	GO:0002230	positive regulation of defense response to virus by host	IEA	AHRD
BP	GO:0002239	response to oomycetes	IEA	AHRD
BP	GO:0002376	immune system process	None	Extended
BP	GO:0002831	regulation of response to biotic stimulus	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	AHRD
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005886	plasma membrane	IEA	AHRD
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006952	defense response	None	Extended
BP	GO:0006955	immune response	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008219	cell death	None	Extended
BP	GO:0009314	response to radiation	None	Extended
BP	GO:0009416	response to light stimulus	None	Extended
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009607	response to biotic stimulus	None	Extended
BP	GO:0009611	response to wounding	IEA	AHRD
BP	GO:0009626	plant-type hypersensitive response	IEA	AHRD
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009637	response to blue light	IEA	AHRD
BP	GO:0009642	response to light intensity	None	Extended
BP	GO:0009646	response to absence of light	IEA	AHRD
BP	GO:0009751	response to salicylic acid	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0012501	programmed cell death	None	Extended
BP	GO:0014070	response to organic cyclic compound	None	Extended
CC	GO:0016020	membrane	None	Extended
BP	GO:0031347	regulation of defense response	None	Extended
BP	GO:0032101	regulation of response to external stimulus	None	Extended
BP	GO:0033554	cellular response to stress	None	Extended
BP	GO:0034050	programmed cell death induced by symbiont	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0043207	response to external biotic stimulus	None	Extended
BP	GO:0044403	biological process involved in symbiotic interaction	None	Extended
BP	GO:0044419	biological process involved in interspecies interaction between organisms	None	Extended
BP	GO:0045087	innate immune response	None	Extended
BP	GO:0048583	regulation of response to stimulus	None	Extended
BP	GO:0050688	regulation of defense response to virus	None	Extended
BP	GO:0050691	regulation of defense response to virus by host	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051702	biological process involved in interaction with symbiont	None	Extended
BP	GO:0051707	response to other organism	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0070887	cellular response to chemical stimulus	None	Extended
BP	GO:0071310	cellular response to organic substance	None	Extended
BP	GO:0071407	cellular response to organic cyclic compound	None	Extended
BP	GO:0071446	cellular response to salicylic acid stimulus	IEA	AHRD
BP	GO:0080134	regulation of response to stress	None	Extended
BP	GO:0098542	defense response to other organism	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended
BP	GO:1901701	cellular response to oxygen-containing compound	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0009595	detection of biotic stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0010359	regulation of anion channel activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0016045	detection of bacterium	IEP	Predict GO terms from Neighborhoods
CC	GO:0032541	cortical endoplasmic reticulum	IEP	Predict GO terms from Neighborhoods
BP	GO:0044070	regulation of anion transport	IEP	Predict GO terms from Neighborhoods
CC	GO:0071782	endoplasmic reticulum tubular network	IEP	Predict GO terms from Neighborhoods
BP	GO:0098543	detection of other organism	IEP	Predict GO terms from Neighborhoods
BP	GO:0098581	detection of external biotic stimulus	IEP	Predict GO terms from Neighborhoods
CC	GO:0098827	endoplasmic reticulum subcompartment	IEP	Predict GO terms from Neighborhoods
BP	GO:1903959	regulation of anion transmembrane transport	IEP	Predict GO terms from Neighborhoods
CC	GO:1990578	perinuclear endoplasmic reticulum membrane	IEP	Predict GO terms from Neighborhoods

No InterPro domains available for this sequence

External Links

No external refs found!

SOLTUB.AGRIA.G00000013678

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation