SOLTUB.AGRIA.G00000014386

Description : Pheophorbide a oxygenase, chloroplastic

Gene families : OG_02_0003863 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000014386
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_23

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004497	monooxygenase activity	IEA	AHRD
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	IEA	AHRD
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008202	steroid metabolic process	IEA	AHRD
BP	GO:0009056	catabolic process	None	Extended
CC	GO:0009526	plastid envelope	None	Extended
BP	GO:0009820	alkaloid metabolic process	IEA	AHRD
CC	GO:0009941	chloroplast envelope	IEA	AHRD
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016020	membrane	None	Extended
MF	GO:0016491	oxidoreductase activity	None	Extended
CC	GO:0031090	organelle membrane	None	Extended
CC	GO:0031967	organelle envelope	None	Extended
CC	GO:0031975	envelope	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
CC	GO:0042170	plastid membrane	IEA	AHRD
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0044270	cellular nitrogen compound catabolic process	IEA	AHRD
MF	GO:0051536	iron-sulfur cluster binding	IEA	AHRD
MF	GO:0051540	metal cluster binding	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901565	organonitrogen compound catabolic process	IEA	AHRD
BP	GO:1901575	organic substance catabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000155	phosphorelay sensor kinase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0000976	transcription cis-regulatory region binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0001067	transcription regulatory region nucleic acid binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0001708	cell fate specification	IEP	Predict GO terms from Neighborhoods
BP	GO:0003006	developmental process involved in reproduction	IEP	Predict GO terms from Neighborhoods
MF	GO:0003676	nucleic acid binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0003677	DNA binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0003690	double-stranded DNA binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0003700	DNA-binding transcription factor activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0003993	acid phosphatase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004144	diacylglycerol O-acyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004467	long-chain fatty acid-CoA ligase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004673	protein histidine kinase activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0005634	nucleus	IEP	Predict GO terms from Neighborhoods
BP	GO:0006355	regulation of DNA-templated transcription	IEP	Predict GO terms from Neighborhoods
BP	GO:0006644	phospholipid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006714	sesquiterpenoid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006720	isoprenoid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006721	terpenoid metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0008169	C-methyltransferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0008299	isoprenoid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0008610	lipid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009299	mRNA transcription	IEP	Predict GO terms from Neighborhoods
BP	GO:0009314	response to radiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0009416	response to light stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0009584	detection of visible light	IEP	Predict GO terms from Neighborhoods
BP	GO:0009606	tropism	IEP	Predict GO terms from Neighborhoods
BP	GO:0009637	response to blue light	IEP	Predict GO terms from Neighborhoods
BP	GO:0009639	response to red or far red light	IEP	Predict GO terms from Neighborhoods
BP	GO:0009640	photomorphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0009719	response to endogenous stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0009725	response to hormone	IEP	Predict GO terms from Neighborhoods
BP	GO:0009733	response to auxin	IEP	Predict GO terms from Neighborhoods
BP	GO:0009734	auxin-activated signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0009736	cytokinin-activated signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0009755	hormone-mediated signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0009791	post-embryonic development	IEP	Predict GO terms from Neighborhoods
BP	GO:0009793	embryo development ending in seed dormancy	IEP	Predict GO terms from Neighborhoods
MF	GO:0009881	photoreceptor activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0009883	red or far-red light photoreceptor activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0009889	regulation of biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009900	dehiscence	IEP	Predict GO terms from Neighborhoods
BP	GO:0009903	chloroplast avoidance movement	IEP	Predict GO terms from Neighborhoods
BP	GO:0009908	flower development	IEP	Predict GO terms from Neighborhoods
BP	GO:0009942	longitudinal axis specification	IEP	Predict GO terms from Neighborhoods
BP	GO:0010018	far-red light signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0010026	trichome differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0010033	response to organic substance	IEP	Predict GO terms from Neighborhoods
BP	GO:0010050	vegetative phase change	IEP	Predict GO terms from Neighborhoods
BP	GO:0010051	xylem and phloem pattern formation	IEP	Predict GO terms from Neighborhoods
BP	GO:0010086	embryonic root morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0010094	specification of carpel identity	IEP	Predict GO terms from Neighborhoods
BP	GO:0010158	abaxial cell fate specification	IEP	Predict GO terms from Neighborhoods
BP	GO:0010201	response to continuous far red light stimulus by the high-irradiance response system	IEP	Predict GO terms from Neighborhoods
BP	GO:0010203	response to very low fluence red light stimulus	IEP	Predict GO terms from Neighborhoods
MF	GO:0010333	terpene synthase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0010334	sesquiterpene synthase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0010500	transmitting tissue development	IEP	Predict GO terms from Neighborhoods
BP	GO:0010556	regulation of macromolecule biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010930	negative regulation of auxin mediated signaling pathway	IEP	Predict GO terms from Neighborhoods
MF	GO:0015645	fatty acid ligase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0016106	sesquiterpenoid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0016114	terpenoid biosynthetic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0016405	CoA-ligase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016411	acylglycerol O-acyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016775	phosphotransferase activity, nitrogenous group as acceptor	IEP	Predict GO terms from Neighborhoods
MF	GO:0016819	hydrolase activity, acting on acid anhydrides, in sulfonyl-containing anhydrides	IEP	Predict GO terms from Neighborhoods
MF	GO:0016829	lyase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016835	carbon-oxygen lyase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016838	carbon-oxygen lyase activity, acting on phosphates	IEP	Predict GO terms from Neighborhoods
MF	GO:0016878	acid-thiol ligase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0017006	protein-tetrapyrrole linkage	IEP	Predict GO terms from Neighborhoods
BP	GO:0017007	protein-bilin linkage	IEP	Predict GO terms from Neighborhoods
BP	GO:0017009	protein-phycocyanobilin linkage	IEP	Predict GO terms from Neighborhoods
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0019637	organophosphate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0022412	cellular process involved in reproduction in multicellular organism	IEP	Predict GO terms from Neighborhoods
BP	GO:0022414	reproductive process	IEP	Predict GO terms from Neighborhoods
MF	GO:0030795	methyl jasmonate methylesterase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0031326	regulation of cellular biosynthetic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0031516	far-red light photoreceptor activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0032501	multicellular organismal process	IEP	Predict GO terms from Neighborhoods
BP	GO:0032502	developmental process	IEP	Predict GO terms from Neighborhoods
BP	GO:0033383	geranyl diphosphate metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0034007	S-linalool synthase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0042214	terpene metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0042221	response to chemical	IEP	Predict GO terms from Neighborhoods
MF	GO:0043565	sequence-specific DNA binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0043692	monoterpene metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0043693	monoterpene biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0045165	cell fate commitment	IEP	Predict GO terms from Neighborhoods
BP	GO:0046246	terpene biosynthetic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0046983	protein dimerization activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0047196	long-chain-alcohol O-fatty-acyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0047461	(+)-delta-cadinene synthase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0047627	adenylylsulfatase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0048262	determination of dorsal/ventral asymmetry	IEP	Predict GO terms from Neighborhoods
BP	GO:0048366	leaf development	IEP	Predict GO terms from Neighborhoods
BP	GO:0048437	floral organ development	IEP	Predict GO terms from Neighborhoods
BP	GO:0048442	sepal development	IEP	Predict GO terms from Neighborhoods
BP	GO:0048446	petal morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0048449	floral organ formation	IEP	Predict GO terms from Neighborhoods
BP	GO:0048462	carpel formation	IEP	Predict GO terms from Neighborhoods
BP	GO:0048480	stigma development	IEP	Predict GO terms from Neighborhoods
BP	GO:0048598	embryonic morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0048653	anther development	IEP	Predict GO terms from Neighborhoods
BP	GO:0048756	sieve cell differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0048825	cotyledon development	IEP	Predict GO terms from Neighborhoods
BP	GO:0048826	cotyledon morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0048827	phyllome development	IEP	Predict GO terms from Neighborhoods
BP	GO:0048856	anatomical structure development	IEP	Predict GO terms from Neighborhoods
BP	GO:0048869	cellular developmental process	IEP	Predict GO terms from Neighborhoods
MF	GO:0050551	myrcene synthase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0051252	regulation of RNA metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0051761	sesquiterpene metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0051762	sesquiterpene biosynthetic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0052624	2-phytyl-1,4-naphthoquinone methyltransferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0055122	response to very low light intensity stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0060688	regulation of morphogenesis of a branching structure	IEP	Predict GO terms from Neighborhoods
BP	GO:0071490	cellular response to far red light	IEP	Predict GO terms from Neighborhoods
MF	GO:0080013	(E,E)-geranyllinalool synthase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0080126	ovary septum development	IEP	Predict GO terms from Neighborhoods
MF	GO:0080150	S-adenosyl-L-methionine:benzoic acid carboxyl methyl transferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0090376	seed trichome differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0090377	seed trichome initiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0090603	sieve element differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0120251	hydrocarbon biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0120252	hydrocarbon metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0140110	transcription regulator activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0140299	small molecule sensor activity	IEP	Predict GO terms from Neighborhoods
BP	GO:1901926	cadinene metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1901928	cadinene biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1903506	regulation of nucleic acid-templated transcription	IEP	Predict GO terms from Neighborhoods
BP	GO:1905328	plant septum development	IEP	Predict GO terms from Neighborhoods
BP	GO:1905392	plant organ morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:1905428	regulation of plant organ formation	IEP	Predict GO terms from Neighborhoods
MF	GO:1990837	sequence-specific double-stranded DNA binding	IEP	Predict GO terms from Neighborhoods
BP	GO:2000032	regulation of secondary shoot formation	IEP	Predict GO terms from Neighborhoods
BP	GO:2000241	regulation of reproductive process	IEP	Predict GO terms from Neighborhoods
BP	GO:2000306	positive regulation of photomorphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:2001141	regulation of RNA biosynthetic process	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR036922	Rieske_2Fe-2S_sf	72	207
IPR013626	PaO	308	405
IPR017941	Rieske_2Fe-2S	90	173

External Links

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SOLTUB.AGRIA.G00000014386

Expression Profile

Co-expression Networks

Functional Annotation