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  5. SOLTUB.AGRIA.G00000014510

SOLTUB.AGRIA.G00000014510


Description : Retroelement pol polyprotein-like


Gene families : OG_02_0000238 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000014510
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_147


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP Predict GO terms from Neighborhoods
MF GO:0016779 nucleotidyltransferase activity IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR025724 GAG-pre-integrase_dom 488 558
IPR001584 Integrase_cat-core 573 671
IPR043502 DNA/RNA_pol_sf 962 1283
IPR029472 Copia-like_N 17 61
IPR013103 RVT_2 962 1203
IPR005162 Retrotrans_gag_dom 102 186
IPR012337 RNaseH-like_sf 571 743
No external refs found!