Coexpression cluster: Cluster_147 (HCCA Clusters (HRR 50 & PCC 0.5))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0009505 plant-type cell wall 11.56% (23/199) 2.34 0.0 1e-06
GO:0050793 regulation of developmental process 26.63% (53/199) 1.27 0.0 1e-06
GO:0071554 cell wall organization or biogenesis 13.57% (27/199) 1.85 0.0 8e-06
GO:0005618 cell wall 15.08% (30/199) 1.69 0.0 1e-05
GO:0050896 response to stimulus 57.79% (115/199) 0.58 0.0 1.9e-05
GO:0030312 external encapsulating structure 15.08% (30/199) 1.61 0.0 2.4e-05
GO:0009653 anatomical structure morphogenesis 21.11% (42/199) 1.25 0.0 3.9e-05
GO:0048046 apoplast 10.05% (20/199) 2.02 0.0 4.2e-05
GO:1905255 regulation of RNA binding transcription factor activity 2.01% (4/199) 6.16 0.0 5.1e-05
GO:0110165 cellular anatomical entity 77.39% (154/199) 0.36 0.0 5.2e-05
GO:0099402 plant organ development 15.08% (30/199) 1.49 0.0 6.1e-05
GO:0032502 developmental process 43.72% (87/199) 0.69 0.0 6.2e-05
GO:0009707 chloroplast outer membrane 3.52% (7/199) 3.89 1e-06 9.8e-05
GO:0005575 cellular_component 77.39% (154/199) 0.34 1e-06 0.000107
GO:0005576 extracellular region 13.57% (27/199) 1.55 1e-06 0.000108
GO:0048226 Casparian strip 4.02% (8/199) 3.44 1e-06 0.000132
GO:0031930 mitochondria-nucleus signaling pathway 3.02% (6/199) 4.18 1e-06 0.00015
GO:0009682 induced systemic resistance 4.02% (8/199) 3.38 1e-06 0.000159
GO:0004672 protein kinase activity 13.07% (26/199) 1.51 2e-06 0.0002
GO:0009527 plastid outer membrane 3.52% (7/199) 3.64 2e-06 0.0002
GO:0004674 protein serine/threonine kinase activity 11.06% (22/199) 1.67 2e-06 0.000213
GO:0080092 regulation of pollen tube growth 4.52% (9/199) 2.96 3e-06 0.000309
GO:0009834 plant-type secondary cell wall biogenesis 4.52% (9/199) 2.95 3e-06 0.000317
GO:0009628 response to abiotic stimulus 32.66% (65/199) 0.77 4e-06 0.00037
GO:0009605 response to external stimulus 33.67% (67/199) 0.76 4e-06 0.000371
GO:0048856 anatomical structure development 33.67% (67/199) 0.76 4e-06 0.000371
GO:0016020 membrane 43.22% (86/199) 0.62 4e-06 0.000374
GO:0008150 biological_process 76.38% (152/199) 0.31 6e-06 0.000501
GO:0006950 response to stress 42.71% (85/199) 0.61 6e-06 0.000508
GO:0051704 obsolete multi-organism process 2.51% (5/199) 4.24 7e-06 0.000568
GO:0016773 phosphotransferase activity, alcohol group as acceptor 13.07% (26/199) 1.39 7e-06 0.000586
GO:0022414 reproductive process 30.15% (60/199) 0.78 1e-05 0.000758
GO:0009819 drought recovery 2.51% (5/199) 4.11 1.1e-05 0.000769
GO:1901002 positive regulation of response to salt stress 4.02% (8/199) 2.95 1.1e-05 0.000781
GO:0009631 cold acclimation 3.52% (7/199) 3.24 1.1e-05 0.00079
GO:0031540 regulation of anthocyanin biosynthetic process 3.02% (6/199) 3.54 1.4e-05 0.000932
GO:0010769 regulation of cell morphogenesis involved in differentiation 4.52% (9/199) 2.66 1.5e-05 0.000965
GO:0007165 signal transduction 20.6% (41/199) 0.98 1.6e-05 0.001044
GO:0009832 plant-type cell wall biogenesis 5.03% (10/199) 2.45 1.8e-05 0.001116
GO:2000603 regulation of secondary growth 2.01% (4/199) 4.62 2.1e-05 0.001116
GO:2000605 positive regulation of secondary growth 2.01% (4/199) 4.62 2.1e-05 0.001116
GO:0040008 regulation of growth 12.06% (24/199) 1.36 2.3e-05 0.001139
GO:0009627 systemic acquired resistance 4.02% (8/199) 2.83 1.9e-05 0.001153
GO:0010377 guard cell fate commitment 1.51% (3/199) 5.74 2.1e-05 0.001159
GO:0009733 response to auxin 8.54% (17/199) 1.7 2.2e-05 0.00116
GO:0051239 regulation of multicellular organismal process 17.09% (34/199) 1.09 2.3e-05 0.00116
GO:0090698 post-embryonic plant morphogenesis 6.53% (13/199) 2.04 2e-05 0.001164
GO:0003674 molecular_function 73.87% (147/199) 0.31 2e-05 0.001166
GO:1905392 plant organ morphogenesis 7.54% (15/199) 1.84 2.4e-05 0.001171
GO:0047484 regulation of response to osmotic stress 5.53% (11/199) 2.25 2.4e-05 0.001171
GO:0031537 regulation of anthocyanin metabolic process 3.52% (7/199) 3.1 1.9e-05 0.001181
GO:0005251 delayed rectifier potassium channel activity 1.01% (2/199) 7.62 2.6e-05 0.001215
GO:0090547 response to low humidity 1.51% (3/199) 5.62 2.8e-05 0.001278
GO:0045229 external encapsulating structure organization 10.05% (20/199) 1.51 2.8e-05 0.001284
GO:0007275 multicellular organism development 15.08% (30/199) 1.16 3e-05 0.001316
GO:0016301 kinase activity 13.07% (26/199) 1.27 3e-05 0.001335
GO:0003006 developmental process involved in reproduction 25.13% (50/199) 0.82 3.2e-05 0.001372
GO:0038023 signaling receptor activity 7.04% (14/199) 1.85 4.2e-05 0.001765
GO:0050789 regulation of biological process 47.24% (94/199) 0.49 4.3e-05 0.001768
GO:0071555 cell wall organization 8.54% (17/199) 1.62 4.4e-05 0.001803
GO:0061086 negative regulation of histone H3-K27 methylation 1.51% (3/199) 5.4 4.5e-05 0.001823
GO:0051510 regulation of unidimensional cell growth 5.03% (10/199) 2.26 5.2e-05 0.00206
GO:0031057 negative regulation of histone modification 3.02% (6/199) 3.19 5.5e-05 0.002124
GO:0006468 protein phosphorylation 10.55% (21/199) 1.39 5.7e-05 0.0022
GO:0016772 transferase activity, transferring phosphorus-containing groups 13.57% (27/199) 1.18 6e-05 0.002269
GO:0048580 regulation of post-embryonic development 11.06% (22/199) 1.34 6.3e-05 0.002279
GO:0031224 intrinsic component of membrane 18.09% (36/199) 0.98 6.2e-05 0.002284
GO:0000902 cell morphogenesis 10.55% (21/199) 1.39 6.2e-05 0.002292
GO:0001101 response to acid chemical 12.06% (24/199) 1.26 7e-05 0.002407
GO:0031542 positive regulation of anthocyanin biosynthetic process 2.01% (4/199) 4.19 6.9e-05 0.00241
GO:0022603 regulation of anatomical structure morphogenesis 8.54% (17/199) 1.57 6.9e-05 0.002443
GO:0060089 molecular transducer activity 7.04% (14/199) 1.77 7.2e-05 0.002448
GO:0071669 plant-type cell wall organization or biogenesis 7.04% (14/199) 1.76 8e-05 0.002541
GO:0009415 response to water 11.56% (23/199) 1.28 7.9e-05 0.002553
GO:0008076 voltage-gated potassium channel complex 1.01% (2/199) 7.03 7.7e-05 0.002553
GO:0016630 protochlorophyllide reductase activity 1.01% (2/199) 7.03 7.7e-05 0.002553
GO:0032501 multicellular organismal process 29.15% (58/199) 0.7 7.8e-05 0.002556
GO:0005886 plasma membrane 23.62% (47/199) 0.79 0.000103 0.003229
GO:0009423 chorismate biosynthetic process 2.01% (4/199) 4.03 0.000106 0.003301
GO:0009755 hormone-mediated signaling pathway 11.06% (22/199) 1.29 0.000112 0.00335
GO:0009759 indole glucosinolate biosynthetic process 2.51% (5/199) 3.42 0.000112 0.003378
GO:0048509 regulation of meristem development 4.52% (9/199) 2.28 0.000111 0.003411
GO:0042546 cell wall biogenesis 5.03% (10/199) 2.12 0.000121 0.003566
GO:0003824 catalytic activity 45.73% (91/199) 0.47 0.000124 0.003573
GO:0007389 pattern specification process 9.05% (18/199) 1.45 0.000123 0.003584
GO:0046417 chorismate metabolic process 2.01% (4/199) 3.95 0.000135 0.003848
GO:0000904 cell morphogenesis involved in differentiation 8.04% (16/199) 1.55 0.000137 0.003859
GO:0006568 tryptophan metabolic process 2.51% (5/199) 3.34 0.000143 0.00386
GO:0006586 indolalkylamine metabolic process 2.51% (5/199) 3.34 0.000143 0.00386
GO:0031969 chloroplast membrane 4.52% (9/199) 2.24 0.000139 0.003879
GO:0009309 amine biosynthetic process 2.51% (5/199) 3.33 0.00015 0.003881
GO:0042401 cellular biogenic amine biosynthetic process 2.51% (5/199) 3.33 0.00015 0.003881
GO:0005515 protein binding 50.75% (101/199) 0.42 0.000142 0.003907
GO:0010091 trichome branching 3.52% (7/199) 2.62 0.000156 0.003908
GO:0031004 potassium ion-transporting ATPase complex 1.01% (2/199) 6.62 0.000154 0.003923
GO:0022604 regulation of cell morphogenesis 5.53% (11/199) 1.94 0.000162 0.003924
GO:0048229 gametophyte development 8.04% (16/199) 1.54 0.000149 0.003926
GO:2000023 regulation of lateral root development 3.02% (6/199) 2.92 0.000156 0.003932
GO:0009962 regulation of flavonoid biosynthetic process 3.52% (7/199) 2.64 0.000148 0.003939
GO:0042803 protein homodimerization activity 8.54% (17/199) 1.47 0.00016 0.003955
GO:0009270 response to humidity 1.51% (3/199) 4.81 0.000162 0.003958
GO:0010015 root morphogenesis 4.52% (9/199) 2.2 0.000173 0.004153
GO:0050794 regulation of cellular process 41.21% (82/199) 0.5 0.000189 0.004499
GO:0010444 guard mother cell differentiation 2.01% (4/199) 3.81 0.000195 0.004541
GO:0031539 positive regulation of anthocyanin metabolic process 2.01% (4/199) 3.81 0.000195 0.004541
GO:0009266 response to temperature stimulus 13.57% (27/199) 1.08 0.000203 0.004703
GO:0010438 cellular response to sulfur starvation 2.01% (4/199) 3.76 0.000223 0.005107
GO:0031968 organelle outer membrane 3.52% (7/199) 2.54 0.000227 0.005146
GO:0051707 response to other organism 24.62% (49/199) 0.72 0.000233 0.005246
GO:0043455 regulation of secondary metabolic process 5.53% (11/199) 1.87 0.000245 0.005316
GO:0019867 outer membrane 3.52% (7/199) 2.52 0.000239 0.005317
GO:0033169 histone H3-K9 demethylation 1.51% (3/199) 4.62 0.000243 0.005318
GO:0044419 biological process involved in interspecies interaction between organisms 25.13% (50/199) 0.71 0.000241 0.005328
GO:0102721 ubiquinol:oxygen oxidoreductase activity 1.01% (2/199) 6.3 0.000255 0.005487
GO:0065009 regulation of molecular function 11.56% (23/199) 1.16 0.000285 0.006067
GO:0042802 identical protein binding 15.08% (30/199) 0.97 0.000311 0.006577
GO:0065001 specification of axis polarity 3.02% (6/199) 2.73 0.000317 0.006641
GO:0065007 biological regulation 48.74% (97/199) 0.41 0.000327 0.006677
GO:0000162 tryptophan biosynthetic process 2.01% (4/199) 3.62 0.000326 0.006715
GO:0046219 indolalkylamine biosynthetic process 2.01% (4/199) 3.62 0.000326 0.006715
GO:0001558 regulation of cell growth 6.53% (13/199) 1.63 0.000338 0.006841
GO:0042277 peptide binding 4.02% (8/199) 2.23 0.000344 0.006908
GO:0016310 phosphorylation 11.06% (22/199) 1.17 0.000355 0.007067
GO:0009987 cellular process 64.32% (128/199) 0.3 0.00036 0.007122
GO:0006723 cuticle hydrocarbon biosynthetic process 2.51% (5/199) 3.04 0.000371 0.007277
GO:0009916 alternative oxidase activity 1.01% (2/199) 6.03 0.000382 0.007363
GO:0010230 alternative respiration 1.01% (2/199) 6.03 0.000382 0.007363
GO:0010016 shoot system morphogenesis 3.02% (6/199) 2.67 0.000389 0.007454
GO:0042343 indole glucosinolate metabolic process 2.51% (5/199) 3.01 0.000416 0.007906
GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor 2.01% (4/199) 3.51 0.000435 0.008199
GO:0048638 regulation of developmental growth 8.04% (16/199) 1.39 0.000447 0.008353
GO:0009620 response to fungus 12.06% (24/199) 1.08 0.00046 0.008545
GO:0042762 regulation of sulfur metabolic process 3.02% (6/199) 2.62 0.000474 0.008667
GO:0051179 localization 22.11% (44/199) 0.73 0.000472 0.008686
GO:2000069 regulation of post-embryonic root development 3.02% (6/199) 2.61 0.000487 0.008842
GO:0006558 L-phenylalanine metabolic process 2.01% (4/199) 3.45 0.000512 0.009149
GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process 2.01% (4/199) 3.45 0.000512 0.009149
GO:0022840 leak channel activity 1.01% (2/199) 5.81 0.000533 0.009188
GO:0022841 potassium ion leak channel activity 1.01% (2/199) 5.81 0.000533 0.009188
GO:0022842 narrow pore channel activity 1.01% (2/199) 5.81 0.000533 0.009188
GO:0061866 obsolete negative regulation of histone H3-S10 phosphorylation 1.01% (2/199) 5.81 0.000533 0.009188
GO:1990837 sequence-specific double-stranded DNA binding 11.06% (22/199) 1.13 0.000518 0.009197
GO:0009791 post-embryonic development 11.56% (23/199) 1.09 0.000542 0.009221
GO:0048584 positive regulation of response to stimulus 13.07% (26/199) 1.01 0.000541 0.009262
GO:0009094 L-phenylalanine biosynthetic process 1.51% (3/199) 4.2 0.000578 0.009571
GO:1902223 erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process 1.51% (3/199) 4.2 0.000578 0.009571
GO:0035017 cuticle pattern formation 2.01% (4/199) 3.41 0.000568 0.009592
GO:0019216 regulation of lipid metabolic process 5.53% (11/199) 1.72 0.000587 0.009647
GO:0045923 positive regulation of fatty acid metabolic process 2.51% (5/199) 2.91 0.000576 0.009666
GO:0051336 regulation of hydrolase activity 4.52% (9/199) 1.95 0.00061 0.00997
GO:2000026 regulation of multicellular organismal development 11.56% (23/199) 1.07 0.000648 0.010513
GO:0090406 pollen tube 4.02% (8/199) 2.07 0.000708 0.011126
GO:0043650 dicarboxylic acid biosynthetic process 2.01% (4/199) 3.33 0.000693 0.011165
GO:0030322 stabilization of membrane potential 1.01% (2/199) 5.62 0.000708 0.011186
GO:0090533 cation-transporting ATPase complex 1.01% (2/199) 5.62 0.000708 0.011186
GO:1901000 regulation of response to salt stress 4.02% (8/199) 2.07 0.000721 0.011247
GO:0006576 cellular biogenic amine metabolic process 3.02% (6/199) 2.51 0.000703 0.011261
GO:0061085 regulation of histone H3-K27 methylation 1.51% (3/199) 4.07 0.000754 0.011698
GO:2000241 regulation of reproductive process 10.05% (20/199) 1.15 0.000763 0.011754
GO:0048437 floral organ development 4.02% (8/199) 2.04 0.000799 0.012227
GO:0019827 stem cell population maintenance 5.03% (10/199) 1.76 0.000819 0.01246
GO:0009308 amine metabolic process 4.52% (9/199) 1.88 0.00085 0.012851
GO:0044106 cellular amine metabolic process 3.02% (6/199) 2.45 0.000877 0.013022
GO:0080091 regulation of raffinose metabolic process 2.01% (4/199) 3.24 0.000875 0.013071
GO:0009963 positive regulation of flavonoid biosynthetic process 2.01% (4/199) 3.24 0.000875 0.013071
GO:0098727 maintenance of cell number 5.03% (10/199) 1.74 0.000908 0.01309
GO:0097623 potassium ion export across plasma membrane 1.01% (2/199) 5.45 0.000907 0.013146
GO:0098533 ATPase dependent transmembrane transport complex 1.01% (2/199) 5.45 0.000907 0.013146
GO:0005731 nucleolus organizer region 1.01% (2/199) 5.45 0.000907 0.013146
GO:0090627 plant epidermal cell differentiation 3.52% (7/199) 2.2 0.000903 0.013334
GO:0043565 sequence-specific DNA binding 12.06% (24/199) 1.0 0.000938 0.013359
GO:0016049 cell growth 9.55% (19/199) 1.16 0.000935 0.013398
GO:0009638 phototropism 2.01% (4/199) 3.21 0.000956 0.013467
GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors 2.01% (4/199) 3.21 0.000956 0.013467
GO:0016740 transferase activity 23.62% (47/199) 0.65 0.000972 0.013528
GO:0009534 chloroplast thylakoid 2.51% (5/199) 2.74 0.000968 0.013554
GO:0009902 chloroplast relocation 2.01% (4/199) 3.19 0.000999 0.013753
GO:0051667 establishment of plastid localization 2.01% (4/199) 3.19 0.000999 0.013753
GO:0031976 plastid thylakoid 2.51% (5/199) 2.72 0.001028 0.014075
GO:0043207 response to external biotic stimulus 24.62% (49/199) 0.62 0.001132 0.014837
GO:0034705 potassium channel complex 1.01% (2/199) 5.3 0.00113 0.014881
GO:0071257 cellular response to electrical stimulus 1.01% (2/199) 5.3 0.00113 0.014881
GO:1903343 positive regulation of meiotic DNA double-strand break formation 1.01% (2/199) 5.3 0.00113 0.014881
GO:0071365 cellular response to auxin stimulus 2.51% (5/199) 2.67 0.001191 0.014964
GO:0019722 calcium-mediated signaling 2.51% (5/199) 2.67 0.001191 0.014964
GO:0016144 S-glycoside biosynthetic process 3.02% (6/199) 2.36 0.001184 0.015034
GO:0019758 glycosinolate biosynthetic process 3.02% (6/199) 2.36 0.001184 0.015034
GO:0019761 glucosinolate biosynthetic process 3.02% (6/199) 2.36 0.001184 0.015034
GO:0046890 regulation of lipid biosynthetic process 4.52% (9/199) 1.81 0.001209 0.015037
GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway 1.51% (3/199) 3.88 0.001118 0.015047
GO:1902183 regulation of shoot apical meristem development 1.51% (3/199) 3.88 0.001118 0.015047
GO:0033218 amide binding 4.02% (8/199) 1.97 0.001125 0.015066
GO:0042221 response to chemical 34.17% (68/199) 0.49 0.001205 0.015068
GO:0006952 defense response 21.61% (43/199) 0.68 0.00111 0.015108
GO:1901957 regulation of cutin biosynthetic process 2.01% (4/199) 3.13 0.001183 0.01526
GO:0048583 regulation of response to stimulus 21.61% (43/199) 0.67 0.001179 0.015286
GO:0140096 catalytic activity, acting on a protein 17.59% (35/199) 0.77 0.001237 0.015312
GO:0050832 defense response to fungus 8.54% (17/199) 1.21 0.001178 0.015351
GO:0071840 cellular component organization or biogenesis 26.13% (52/199) 0.59 0.001264 0.015558
GO:2000280 regulation of root development 4.02% (8/199) 1.93 0.001295 0.015859
GO:0051128 regulation of cellular component organization 11.56% (23/199) 0.99 0.00131 0.015893
GO:0009409 response to cold 9.55% (19/199) 1.12 0.001308 0.015942
GO:0019750 chloroplast localization 2.01% (4/199) 3.08 0.001336 0.016049
GO:0051644 plastid localization 2.01% (4/199) 3.08 0.001336 0.016049
GO:0003959 NADPH dehydrogenase activity 1.01% (2/199) 5.16 0.001376 0.016447
GO:0043255 regulation of carbohydrate biosynthetic process 3.52% (7/199) 2.09 0.001434 0.01705
GO:0048608 reproductive structure development 7.54% (15/199) 1.28 0.001482 0.017452
GO:0003690 double-stranded DNA binding 11.06% (22/199) 1.01 0.001477 0.017477
GO:0009531 secondary cell wall 1.51% (3/199) 3.71 0.001576 0.018383
GO:0009903 chloroplast avoidance movement 1.51% (3/199) 3.71 0.001576 0.018383
GO:0048827 phyllome development 5.53% (11/199) 1.54 0.001611 0.018705
GO:0043231 intracellular membrane-bounded organelle 45.23% (90/199) 0.37 0.00165 0.018806
GO:0009607 response to biotic stimulus 24.62% (49/199) 0.6 0.001628 0.018815
GO:0070578 RISC-loading complex 1.01% (2/199) 5.03 0.001646 0.018843
GO:2000616 negative regulation of histone H3-K9 acetylation 1.01% (2/199) 5.03 0.001646 0.018843
GO:0031061 negative regulation of histone methylation 1.51% (3/199) 3.68 0.001679 0.019048
GO:0048646 anatomical structure formation involved in morphogenesis 8.54% (17/199) 1.16 0.001704 0.019152
GO:0051248 negative regulation of protein metabolic process 6.03% (12/199) 1.44 0.001722 0.019178
GO:0009738 abscisic acid-activated signaling pathway 4.02% (8/199) 1.87 0.001719 0.019227
GO:1903338 regulation of cell wall organization or biogenesis 3.02% (6/199) 2.26 0.001703 0.019231
GO:0008356 asymmetric cell division 2.01% (4/199) 2.97 0.001746 0.019267
GO:0009789 positive regulation of abscisic acid-activated signaling pathway 3.02% (6/199) 2.25 0.001739 0.019273
GO:0019748 secondary metabolic process 10.05% (20/199) 1.05 0.001768 0.019333
GO:0009506 plasmodesma 14.07% (28/199) 0.85 0.001763 0.019367
GO:1901332 negative regulation of lateral root development 2.01% (4/199) 2.96 0.001811 0.019543
GO:0009913 epidermal cell differentiation 2.01% (4/199) 2.96 0.001811 0.019543
GO:0006955 immune response 7.04% (14/199) 1.3 0.0018 0.019601
GO:0098588 bounding membrane of organelle 14.07% (28/199) 0.85 0.001831 0.019677
GO:0048518 positive regulation of biological process 25.63% (51/199) 0.57 0.001892 0.020243
GO:0048869 cellular developmental process 13.57% (27/199) 0.86 0.001904 0.020285
GO:0009808 lignin metabolic process 3.52% (7/199) 2.01 0.001946 0.020555
GO:0031222 arabinan catabolic process 1.01% (2/199) 4.92 0.001939 0.020561
GO:0009414 response to water deprivation 9.55% (19/199) 1.07 0.001993 0.020953
GO:0051254 positive regulation of RNA metabolic process 10.55% (21/199) 1.0 0.002037 0.021237
GO:0009625 response to insect 2.51% (5/199) 2.5 0.002037 0.021326
GO:0042435 indole-containing compound biosynthetic process 3.02% (6/199) 2.2 0.00208 0.021595
GO:0010439 regulation of glucosinolate biosynthetic process 2.01% (4/199) 2.88 0.002235 0.023009
GO:0045723 positive regulation of fatty acid biosynthetic process 2.01% (4/199) 2.88 0.002235 0.023009
GO:0009888 tissue development 8.04% (16/199) 1.17 0.00225 0.02307
GO:0080134 regulation of response to stress 14.07% (28/199) 0.82 0.002281 0.023193
GO:0010119 regulation of stomatal movement 5.03% (10/199) 1.56 0.002279 0.023264
GO:0043227 membrane-bounded organelle 45.23% (90/199) 0.36 0.002395 0.02395
GO:0009642 response to light intensity 5.03% (10/199) 1.56 0.002379 0.023989
GO:0009944 polarity specification of adaxial/abaxial axis 2.01% (4/199) 2.85 0.002391 0.024005
GO:0045935 positive regulation of nucleobase-containing compound metabolic process 11.06% (22/199) 0.95 0.002373 0.024027
GO:0010105 negative regulation of ethylene-activated signaling pathway 2.01% (4/199) 2.82 0.002553 0.025125
GO:0070298 negative regulation of phosphorelay signal transduction system 2.01% (4/199) 2.82 0.002553 0.025125
GO:0005911 cell-cell junction 14.07% (28/199) 0.81 0.002534 0.025139
GO:0051234 establishment of localization 18.59% (37/199) 0.68 0.002528 0.025182
GO:0016021 integral component of membrane 14.07% (28/199) 0.81 0.002593 0.025305
GO:0010501 RNA secondary structure unwinding 1.01% (2/199) 4.71 0.002592 0.025404
GO:0040007 growth 10.55% (21/199) 0.97 0.00263 0.025565
GO:0009904 chloroplast accumulation movement 1.51% (3/199) 3.45 0.002663 0.025792
GO:0009073 aromatic amino acid family biosynthetic process 2.01% (4/199) 2.8 0.002724 0.026272
GO:0070161 anchoring junction 14.07% (28/199) 0.8 0.002824 0.02713
GO:2000652 regulation of secondary cell wall biogenesis 2.51% (5/199) 2.39 0.002846 0.027233
GO:0045893 positive regulation of DNA-templated transcription 9.55% (19/199) 1.02 0.002907 0.027717
GO:1900376 regulation of secondary metabolite biosynthetic process 3.52% (7/199) 1.9 0.002926 0.027782
GO:1903341 regulation of meiotic DNA double-strand break formation 1.01% (2/199) 4.62 0.002953 0.027931
GO:0046983 protein dimerization activity 8.54% (17/199) 1.08 0.003116 0.029364
GO:1903508 positive regulation of nucleic acid-templated transcription 9.55% (19/199) 1.0 0.003212 0.030156
GO:2001006 regulation of cellulose biosynthetic process 1.51% (3/199) 3.34 0.003264 0.030294
GO:0015995 chlorophyll biosynthetic process 1.51% (3/199) 3.34 0.003264 0.030294
GO:0044085 cellular component biogenesis 5.03% (10/199) 1.49 0.003284 0.030362
GO:1902680 positive regulation of RNA biosynthetic process 9.55% (19/199) 1.0 0.00325 0.030392
GO:0010586 miRNA metabolic process 1.01% (2/199) 4.53 0.003335 0.030719
GO:0010565 regulation of cellular ketone metabolic process 4.52% (9/199) 1.58 0.00355 0.032576
GO:0003700 DNA-binding transcription factor activity 9.05% (18/199) 1.02 0.003625 0.033137
GO:0010675 regulation of cellular carbohydrate metabolic process 3.52% (7/199) 1.84 0.003641 0.033159
GO:0009416 response to light stimulus 13.07% (26/199) 0.81 0.003769 0.033461
GO:0009790 embryo development 8.04% (16/199) 1.09 0.003743 0.033472
GO:0010035 response to inorganic substance 16.08% (32/199) 0.71 0.003759 0.033486
GO:0031221 arabinan metabolic process 1.01% (2/199) 4.45 0.00374 0.03356
GO:0016442 RISC complex 1.01% (2/199) 4.45 0.00374 0.03356
GO:0010646 regulation of cell communication 13.57% (27/199) 0.79 0.003721 0.033642
GO:0045834 positive regulation of lipid metabolic process 3.02% (6/199) 2.03 0.003717 0.033725
GO:0051782 negative regulation of cell division 1.51% (3/199) 3.23 0.004124 0.036474
GO:0010249 auxin conjugate metabolic process 1.01% (2/199) 4.37 0.004166 0.036579
GO:0070406 glutamine binding 1.01% (2/199) 4.37 0.004166 0.036579
GO:0010345 suberin biosynthetic process 2.51% (5/199) 2.25 0.004198 0.036732
GO:0098542 defense response to other organism 17.59% (35/199) 0.66 0.00426 0.037143
GO:0032950 regulation of beta-glucan metabolic process 1.51% (3/199) 3.2 0.004311 0.037317
GO:0032951 regulation of beta-glucan biosynthetic process 1.51% (3/199) 3.2 0.004311 0.037317
GO:0048658 anther wall tapetum development 2.01% (4/199) 2.58 0.004618 0.038882
GO:0016752 sinapoyltransferase activity 1.01% (2/199) 4.3 0.004613 0.038971
GO:0035019 somatic stem cell population maintenance 1.01% (2/199) 4.3 0.004613 0.038971
GO:0035197 siRNA binding 1.01% (2/199) 4.3 0.004613 0.038971
GO:2000615 regulation of histone H3-K9 acetylation 1.01% (2/199) 4.3 0.004613 0.038971
GO:0016143 S-glycoside metabolic process 4.02% (8/199) 1.64 0.00456 0.039066
GO:0019757 glycosinolate metabolic process 4.02% (8/199) 1.64 0.00456 0.039066
GO:0019760 glucosinolate metabolic process 4.02% (8/199) 1.64 0.00456 0.039066
GO:0009698 phenylpropanoid metabolic process 6.53% (13/199) 1.2 0.004665 0.03914
GO:0051172 negative regulation of nitrogen compound metabolic process 11.06% (22/199) 0.87 0.004745 0.039674
GO:0045183 translation factor activity, non-nucleic acid binding 0.5% (1/199) 7.62 0.005091 0.03985
GO:0045741 positive regulation of epidermal growth factor-activated receptor activity 0.5% (1/199) 7.62 0.005091 0.03985
GO:0048170 positive regulation of long-term neuronal synaptic plasticity 0.5% (1/199) 7.62 0.005091 0.03985
GO:0061098 positive regulation of protein tyrosine kinase activity 0.5% (1/199) 7.62 0.005091 0.03985
GO:0045142 triplex DNA binding 0.5% (1/199) 7.62 0.005091 0.03985
GO:1904976 cellular response to bleomycin 0.5% (1/199) 7.62 0.005091 0.03985
GO:1990700 nucleolar chromatin organization 0.5% (1/199) 7.62 0.005091 0.03985
GO:0045435 lycopene epsilon cyclase activity 0.5% (1/199) 7.62 0.005091 0.03985
GO:0070076 histone lysine demethylation 1.51% (3/199) 3.12 0.005109 0.03986
GO:2000038 regulation of stomatal complex development 2.01% (4/199) 2.54 0.005135 0.039936
GO:0006833 water transport 2.01% (4/199) 2.56 0.004872 0.040599
GO:0000976 transcription cis-regulatory region binding 9.55% (19/199) 0.95 0.004896 0.040665
GO:1901700 response to oxygen-containing compound 23.62% (47/199) 0.53 0.004929 0.040798
GO:0001067 transcription regulatory region nucleic acid binding 9.55% (19/199) 0.94 0.005085 0.040848
GO:0003688 DNA replication origin binding 1.01% (2/199) 4.23 0.005081 0.040953
GO:0006977 DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest 1.01% (2/199) 4.23 0.005081 0.040953
GO:0007143 female meiotic nuclear division 1.01% (2/199) 4.23 0.005081 0.040953
GO:0102053 (-)-jasmonoyl-isoleucine synthetase activity 1.01% (2/199) 4.23 0.005081 0.040953
GO:0102057 jasmonoyl-valine synthetase activity 1.01% (2/199) 4.23 0.005081 0.040953
GO:0102058 jasmonoyl-leucine synthetase activity 1.01% (2/199) 4.23 0.005081 0.040953
GO:0062075 pollen aperture formation 1.01% (2/199) 4.23 0.005081 0.040953
GO:0009966 regulation of signal transduction 12.56% (25/199) 0.8 0.004987 0.041138
GO:0010597 green leaf volatile biosynthetic process 2.51% (5/199) 2.16 0.005424 0.042053
GO:0030054 cell junction 15.08% (30/199) 0.7 0.005491 0.042437
GO:0046556 alpha-L-arabinofuranosidase activity 1.01% (2/199) 4.16 0.005571 0.04252
GO:0051602 response to electrical stimulus 1.01% (2/199) 4.16 0.005571 0.04252
GO:0031332 RNAi effector complex 1.01% (2/199) 4.16 0.005571 0.04252
GO:0019932 second-messenger-mediated signaling 2.51% (5/199) 2.16 0.005528 0.042587
GO:0019372 lipoxygenase pathway 2.51% (5/199) 2.15 0.005633 0.042858
GO:0016577 histone demethylation 1.51% (3/199) 3.05 0.005762 0.043434
GO:0043226 organelle 49.25% (98/199) 0.29 0.005755 0.043517
GO:0009072 aromatic amino acid family metabolic process 2.51% (5/199) 2.15 0.005739 0.043533
GO:0016046 detection of fungus 1.01% (2/199) 4.09 0.006081 0.044608
GO:0018874 benzoate metabolic process 1.01% (2/199) 4.09 0.006081 0.044608
GO:0052625 4-aminobenzoate amino acid synthetase activity 1.01% (2/199) 4.09 0.006081 0.044608
GO:0052626 benzoate amino acid synthetase activity 1.01% (2/199) 4.09 0.006081 0.044608
GO:0052627 vanillate amino acid synthetase activity 1.01% (2/199) 4.09 0.006081 0.044608
GO:0052628 4-hydroxybenzoate amino acid synthetase activity 1.01% (2/199) 4.09 0.006081 0.044608
GO:0010314 phosphatidylinositol-5-phosphate binding 1.01% (2/199) 4.09 0.006081 0.044608
GO:0042044 fluid transport 2.01% (4/199) 2.48 0.00598 0.044803
GO:0055028 cortical microtubule 2.01% (4/199) 2.48 0.00598 0.044803
GO:0052482 defense response by cell wall thickening 2.01% (4/199) 2.46 0.006281 0.045798
GO:0052544 defense response by callose deposition in cell wall 2.01% (4/199) 2.46 0.006281 0.045798
GO:0009611 response to wounding 7.54% (15/199) 1.05 0.006464 0.046719
GO:0008285 negative regulation of cell population proliferation 3.02% (6/199) 1.87 0.006435 0.046782
GO:0010371 regulation of gibberellin biosynthetic process 1.51% (3/199) 2.99 0.006462 0.046843
GO:0023051 regulation of signaling 13.07% (26/199) 0.75 0.006522 0.046997
GO:0045087 innate immune response 6.03% (12/199) 1.2 0.006572 0.047216
GO:0002213 defense response to insect 2.01% (4/199) 2.44 0.006592 0.047222
GO:0070469 respirasome 1.01% (2/199) 4.03 0.006612 0.047228
GO:0004312 fatty acid synthase activity 1.51% (3/199) 2.97 0.006707 0.047767
GO:0031060 regulation of histone methylation 2.51% (5/199) 2.09 0.006763 0.047886
GO:0010466 negative regulation of peptidase activity 2.01% (4/199) 2.43 0.006751 0.047942
GO:0009314 response to radiation 13.07% (26/199) 0.74 0.006824 0.048181
GO:0030154 cell differentiation 9.05% (18/199) 0.93 0.006846 0.048201
GO:0019217 regulation of fatty acid metabolic process 2.51% (5/199) 2.08 0.006884 0.048324
GO:0006482 protein demethylation 1.51% (3/199) 2.95 0.006957 0.048558
GO:0008214 protein dealkylation 1.51% (3/199) 2.95 0.006957 0.048558
GO:0045493 xylan catabolic process 1.01% (2/199) 3.97 0.007163 0.048748
GO:2000895 hemicellulose catabolic process 1.01% (2/199) 3.97 0.007163 0.048748
GO:0034703 cation channel complex 1.01% (2/199) 3.97 0.007163 0.048748
GO:0010361 regulation of anion channel activity by blue light 1.01% (2/199) 3.97 0.007163 0.048748
GO:0010362 negative regulation of anion channel activity by blue light 1.01% (2/199) 3.97 0.007163 0.048748
GO:0048574 long-day photoperiodism, flowering 1.51% (3/199) 2.94 0.007212 0.048945
GO:0048364 root development 6.53% (13/199) 1.13 0.007047 0.049052
GO:0010410 hemicellulose metabolic process 2.51% (5/199) 2.06 0.007256 0.049109
GO:0043229 intracellular organelle 48.74% (97/199) 0.29 0.007132 0.049222
GO:2000070 regulation of response to water deprivation 3.02% (6/199) 1.84 0.007117 0.049254
GO:1905393 plant organ formation 4.02% (8/199) 1.53 0.007108 0.049333
GO:0010383 cell wall polysaccharide metabolic process 3.02% (6/199) 1.83 0.007321 0.04941
GO:0065008 regulation of biological quality 17.59% (35/199) 0.61 0.007416 0.049915
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_178 0.009 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_182 0.009 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_5 0.007 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_66 0.008 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_70 0.008 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_78 0.007 Orthogroups with 8 Potato genotypes Compare
Sequences (199) (download table)

InterPro Domains

GO Terms

Family Terms