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  5. SOLTUB.AGRIA.G00000014519

SOLTUB.AGRIA.G00000014519


Description : DNA-binding protein S1FA, putative


Gene families : OG_02_0031737 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000014519
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_62


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEP Predict GO terms from Neighborhoods
BP GO:0002181 cytoplasmic translation IEP Predict GO terms from Neighborhoods
MF GO:0003735 structural constituent of ribosome IEP Predict GO terms from Neighborhoods
MF GO:0003861 3-isopropylmalate dehydratase activity IEP Predict GO terms from Neighborhoods
MF GO:0005198 structural molecule activity IEP Predict GO terms from Neighborhoods
MF GO:0005313 L-glutamate transmembrane transporter activity IEP Predict GO terms from Neighborhoods
CC GO:0005840 ribosome IEP Predict GO terms from Neighborhoods
BP GO:0006412 translation IEP Predict GO terms from Neighborhoods
BP GO:0007605 sensory perception of sound IEP Predict GO terms from Neighborhoods
BP GO:0009081 branched-chain amino acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009082 branched-chain amino acid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009886 post-embryonic animal morphogenesis IEP Predict GO terms from Neighborhoods
MF GO:0015172 acidic amino acid transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015174 basic amino acid transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015189 L-lysine transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0015802 basic amino acid transport IEP Predict GO terms from Neighborhoods
BP GO:0016143 S-glycoside metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0016144 S-glycoside biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0016151 nickel cation binding IEP Predict GO terms from Neighborhoods
MF GO:0016832 aldehyde-lyase activity IEP Predict GO terms from Neighborhoods
BP GO:0019757 glycosinolate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0019758 glycosinolate biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0019760 glucosinolate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0019761 glucosinolate biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0031100 animal organ regeneration IEP Predict GO terms from Neighborhoods
CC GO:0032420 stereocilium IEP Predict GO terms from Neighborhoods
BP GO:0034214 protein hexamerization IEP Predict GO terms from Neighborhoods
BP GO:0035315 hair cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0042023 DNA endoreduplication IEP Predict GO terms from Neighborhoods
BP GO:0042490 mechanoreceptor differentiation IEP Predict GO terms from Neighborhoods
BP GO:0042491 inner ear auditory receptor cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0042753 positive regulation of circadian rhythm IEP Predict GO terms from Neighborhoods
CC GO:0042788 polysomal ribosome IEP Predict GO terms from Neighborhoods
BP GO:0043043 peptide biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0043604 amide biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0044272 sulfur compound biosynthetic process IEP Predict GO terms from Neighborhoods
CC GO:0044391 ribosomal subunit IEP Predict GO terms from Neighborhoods
BP GO:0044786 cell cycle DNA replication IEP Predict GO terms from Neighborhoods
BP GO:0048563 post-embryonic animal organ morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0050954 sensory perception of mechanical stimulus IEP Predict GO terms from Neighborhoods
CC GO:0060091 kinocilium IEP Predict GO terms from Neighborhoods
BP GO:0060113 inner ear receptor cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0060118 vestibular receptor cell development IEP Predict GO terms from Neighborhoods
BP GO:0060119 inner ear receptor cell development IEP Predict GO terms from Neighborhoods
BP GO:0060122 inner ear receptor cell stereocilium organization IEP Predict GO terms from Neighborhoods
BP GO:0080086 stamen filament development IEP Predict GO terms from Neighborhoods
BP GO:0080144 amino acid homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0089718 amino acid import across plasma membrane IEP Predict GO terms from Neighborhoods
BP GO:0097421 liver regeneration IEP Predict GO terms from Neighborhoods
CC GO:0097730 non-motile cilium IEP Predict GO terms from Neighborhoods
CC GO:0097732 9+2 non-motile cilium IEP Predict GO terms from Neighborhoods
CC GO:0098554 cytoplasmic side of endoplasmic reticulum membrane IEP Predict GO terms from Neighborhoods
CC GO:0098556 cytoplasmic side of rough endoplasmic reticulum membrane IEP Predict GO terms from Neighborhoods
CC GO:0098858 actin-based cell projection IEP Predict GO terms from Neighborhoods
MF GO:0106099 2-keto-3-deoxy-L-rhamnonate aldolase activity IEP Predict GO terms from Neighborhoods
BP GO:1900056 negative regulation of leaf senescence IEP Predict GO terms from Neighborhoods
BP GO:1901566 organonitrogen compound biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1901659 glycosyl compound biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1902022 L-lysine transport IEP Predict GO terms from Neighborhoods
BP GO:1902475 L-alpha-amino acid transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:1903401 L-lysine transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:1990822 basic amino acid transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:1990823 response to leukemia inhibitory factor IEP Predict GO terms from Neighborhoods
BP GO:1990830 cellular response to leukemia inhibitory factor IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR006779 S1FA_DNA-bd 5 62
No external refs found!